BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012910
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...   461   e-127
ref|XP_002516394.1| spliceosome associated protein, putative [Ri...   457   e-126
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...   454   e-125
ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like...   451   e-124
ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like...   450   e-124

>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score =  461 bits (1185), Expect = e-127
 Identities = 236/295 (80%), Positives = 241/295 (81%), Gaps = 4/295 (1%)
 Frame = +3

Query: 48  IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL 227
           IAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDRVTNL
Sbjct: 5   IAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNL 64

Query: 228 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD 407
           HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD
Sbjct: 65  HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD 124

Query: 408 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFETSDAAIEAMNGQYLCNRQI 587
           EKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SYDSFE SDAAIEAMNGQYLCNRQI
Sbjct: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQI 184

Query: 588 TVSYAYKKDTKGERHGTPAERTLAGSNPGIQKNRPHTLFASGPPTLPTGPQMNGTMGA-- 761
           TVSYAYKKDTKGERHGTPAER LA SNP   K+RPHTLFASGPPTLP  PQ NG MGA  
Sbjct: 185 TVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNMGAPM 244

Query: 762 --XXXXXXXXXXXXXXXXXXXXXQTGAFXXXXXXXXXXXXSWAGHPHQQGQMNAP 920
                                  Q+GAF            SW G P Q GQ   P
Sbjct: 245 PPRPFANGVVPPVPIPAMRPPPPQSGAF---PPMQLAGPPSWQGQPQQPGQPMQP 296


>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223544492|gb|EEF46011.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 376

 Score =  457 bits (1175), Expect = e-126
 Identities = 222/238 (93%), Positives = 231/238 (97%)
 Frame = +3

Query: 48  IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL 227
           IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL
Sbjct: 5   IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL 64

Query: 228 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD 407
           HQGYGFVEFRSEEDADYAIK++NMIKL+GKPIRVNKASQDKKSLDVGANLF+GNLDPDVD
Sbjct: 65  HQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLDPDVD 124

Query: 408 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFETSDAAIEAMNGQYLCNRQI 587
           EKLL+DTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSF+ SDAAIEAMNGQYLCNRQI
Sbjct: 125 EKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLCNRQI 184

Query: 588 TVSYAYKKDTKGERHGTPAERTLAGSNPGIQKNRPHTLFASGPPTLPTGPQMNGTMGA 761
           TVSYAYKKDTKGERHGTPAER LA SNP  QK+RPHTLFASGPPTLP+ PQ NGT+GA
Sbjct: 185 TVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTVGA 242


>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 379

 Score =  454 bits (1167), Expect = e-125
 Identities = 221/238 (92%), Positives = 228/238 (95%)
 Frame = +3

Query: 48  IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL 227
           IAPGVGANLLGQHSAERNQDATAYVGNLDPQ+SEELLWELFVQAGPVVNVYVPKDRVTN 
Sbjct: 5   IAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQ 64

Query: 228 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD 407
           HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLDPDVD
Sbjct: 65  HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVD 124

Query: 408 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFETSDAAIEAMNGQYLCNRQI 587
           EKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSFE SD+AIEAMNGQYLCNRQI
Sbjct: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQI 184

Query: 588 TVSYAYKKDTKGERHGTPAERTLAGSNPGIQKNRPHTLFASGPPTLPTGPQMNGTMGA 761
           TVSYAYKKDTKGERHGTPAER LA SNP  QK+RPHTLFASGPP+LP  PQ NGT+ A
Sbjct: 185 TVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTIPA 242


>ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 364

 Score =  451 bits (1159), Expect = e-124
 Identities = 219/234 (93%), Positives = 225/234 (96%)
 Frame = +3

Query: 48  IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL 227
           IAPGVGANLLGQH+AERNQDATAYVGNLDPQ+ EELLWELFVQAGPVVNVYVPKDRVTN 
Sbjct: 5   IAPGVGANLLGQHAAERNQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQ 64

Query: 228 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD 407
           HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLDPDVD
Sbjct: 65  HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVD 124

Query: 408 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFETSDAAIEAMNGQYLCNRQI 587
           EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFE SD+AIEAMNGQYLCNRQI
Sbjct: 125 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQI 184

Query: 588 TVSYAYKKDTKGERHGTPAERTLAGSNPGIQKNRPHTLFASGPPTLPTGPQMNG 749
           TVSYAYKKDTKGERHGTPAER LA SNP  QK+RPHTLFASGPPTLP+ PQ NG
Sbjct: 185 TVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSAPQANG 238


>ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 365

 Score =  450 bits (1158), Expect = e-124
 Identities = 219/234 (93%), Positives = 226/234 (96%)
 Frame = +3

Query: 48  IAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNL 227
           IAPGVGANLLGQH+AERNQDATAYVGNLDPQ+SEELLWELFVQAGPVVNVYVPKDRVTN 
Sbjct: 5   IAPGVGANLLGQHAAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQ 64

Query: 228 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLDPDVD 407
           HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLDPDVD
Sbjct: 65  HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVD 124

Query: 408 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFETSDAAIEAMNGQYLCNRQI 587
           EKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSFE SD+AIEAMNGQYLCNRQI
Sbjct: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQI 184

Query: 588 TVSYAYKKDTKGERHGTPAERTLAGSNPGIQKNRPHTLFASGPPTLPTGPQMNG 749
           TVSYAYKKDTKGERHGTPAER LA SNP  QK+RPHTLFASGPPTLP+ PQ NG
Sbjct: 185 TVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSVPQANG 238