BLASTX nr result
ID: Cimicifuga21_contig00012906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012906
(461 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 37 1e-07
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera] 37 2e-07
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795... 42 2e-07
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 37 2e-06
emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera] 38 2e-06
>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 37.4 bits (85), Expect(3) = 1e-07
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 140 YCTGSYADVLTTKPTSHDRTKHIEVDCHF 54
YC A + P HDRTKH+EVD HF
Sbjct: 1102 YCDNKAAIEIAHNPVQHDRTKHVEVDRHF 1130
Score = 33.5 bits (75), Expect(3) = 1e-07
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = -2
Query: 292 GSYAFFGGNLVTWKSENE----LSTFECRRGIYSCGTYNM*NDCWVETLLRDIGVTVPDR 125
G + F GGNLVTWKS+ + S+ E + G M W+ LL D+G
Sbjct: 1042 GYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMARGLCEM---LWLRNLLNDLGFRQKKA 1098
Query: 124 MQMF 113
M ++
Sbjct: 1099 MPLY 1102
Score = 28.9 bits (63), Expect(3) = 1e-07
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 410 ISSKFMHAGPRAHWHARSFILWYLKSAP 327
+ S+FMH AH A IL YLKSAP
Sbjct: 981 VVSQFMHNPSEAHMDAVFRILQYLKSAP 1008
>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
Length = 1409
Score = 37.0 bits (84), Expect(3) = 2e-07
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 140 YCTGSYADVLTTKPTSHDRTKHIEVDCHF--NMSMNKKFTTPYIK 12
+C A + P HDRTKH+EVD HF +K P++K
Sbjct: 1331 FCDNKAAIAIAHNPVQHDRTKHVEVDRHFIKQKLEDKVIQFPFVK 1375
Score = 32.7 bits (73), Expect(3) = 2e-07
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = -2
Query: 292 GSYAFFGGNLVTWKSENE----LSTFECR-RGIYSCGTYNM*NDCWVETLLRDIGVTVPD 128
G + F GGNLVTW+S+ LS+ E RG+ T + W++ LL +I + +
Sbjct: 1271 GYFTFVGGNLVTWRSKKHKVVALSSAEAEFRGM----TKGLCELLWLKRLLEEIKCSSQN 1326
Query: 127 RMQMF 113
M +F
Sbjct: 1327 TMNLF 1331
Score = 29.3 bits (64), Expect(3) = 2e-07
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 404 SKFMHAGPRAHWHARSFILWYLKSAPRR 321
S+FMH H A IL YLKS+PRR
Sbjct: 1212 SQFMHCPSEDHMSAVVRILRYLKSSPRR 1239
>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
Length = 1815
Score = 41.6 bits (96), Expect(4) = 2e-07
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 140 YCTGSYADVLTTKPTSHDRTKHIEVDCHF--NMSMNKKFTTPYI 15
YC A + + P H+RTKHIE+DCHF ++K+ T +I
Sbjct: 1437 YCDNQAALHIASNPVFHERTKHIEIDCHFIREKLLSKEIVTEFI 1480
Score = 26.9 bits (58), Expect(4) = 2e-07
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 322 GCLVLTFLAFGSYAFFGGNLVTWKSENE 239
GC + G F GGNL++WKS+ +
Sbjct: 1367 GCPMDRRSTSGYCVFIGGNLISWKSKKQ 1394
Score = 25.0 bits (53), Expect(4) = 2e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 410 ISSKFMHAGPRAHWHARSFILWYLKSAP 327
+ S+FM HW+A IL Y+K AP
Sbjct: 1316 VVSQFMQNPHLDHWNAVMRILRYVKKAP 1343
Score = 23.9 bits (50), Expect(4) = 2e-07
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 234 AHLSADAEYIAVAHTTCEMI 175
A SA+AEY ++A TCE++
Sbjct: 1398 ARSSAEAEYRSMAIVTCELM 1417
>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 37.0 bits (84), Expect(4) = 2e-06
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 140 YCTGSYADVLTTKPTSHDRTKHIEVDCHF 54
YC A + P HDRTKH+E+D HF
Sbjct: 1427 YCDNKAAISIAHNPVQHDRTKHVEIDRHF 1455
Score = 28.1 bits (61), Expect(4) = 2e-06
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 234 AHLSADAEYIAVAHTTCEMIVGSKLFFEI 148
A SA+AEY A+AH CE++ K+ E+
Sbjct: 1388 ARSSAEAEYRAMAHGVCEILWLKKILEEL 1416
Score = 26.2 bits (56), Expect(4) = 2e-06
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 410 ISSKFMHAGPRAHWHARSFILWYLKSAP 327
I S+FMH+ H A IL YLKS P
Sbjct: 1306 IVSQFMHSPYEVHLEAVYRILRYLKSTP 1333
Score = 23.1 bits (48), Expect(4) = 2e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 292 GSYAFFGGNLVTWKSENE 239
G + GNLVTW+S+ +
Sbjct: 1367 GYCTYIWGNLVTWRSKKQ 1384
>emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera]
Length = 772
Score = 37.7 bits (86), Expect(4) = 2e-06
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1
Query: 137 CTGSYADVLTTKPTSHDRTKHIEVDCHF 54
C A + + P H+RTKHIEVDCHF
Sbjct: 695 CDNQAALHIASNPVFHERTKHIEVDCHF 722
Score = 26.6 bits (57), Expect(4) = 2e-06
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 292 GSYAFFGGNLVTWKSENE 239
G F GGNL++WKS+ +
Sbjct: 634 GYCVFIGGNLISWKSKKQ 651
Score = 26.2 bits (56), Expect(4) = 2e-06
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 234 AHLSADAEYIAVAHTTCEMI 175
A SA+AEY A+A TCE+I
Sbjct: 655 ARSSAEAEYRAMALATCELI 674
Score = 23.5 bits (49), Expect(4) = 2e-06
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 410 ISSKFMHAGPRAHWHARSFILWYLKSAP 327
+ S+F+ + +HW IL Y+KS P
Sbjct: 573 VVSQFLQSPCDSHWDVVIRILRYIKSTP 600