BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012897
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28

>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/105 (67%), Positives = 88/105 (83%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           NTLING  RV+EVDRG +LLKE+  K DL PDVVTYTS ISGYCKLG+M+ ASILF  MI
Sbjct: 276 NTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMI 335

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
           + GI+P++FT+N+LI+GFGK GDM SAE +Y+ MLL+GC PD++T
Sbjct: 336 SSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIIT 380



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/104 (30%), Positives = 53/104 (50%)
 Frame = -1

Query: 313 LINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMINF 134
           L N L + + +   R  L+++  +  ++     Y   I G+CK G +D+A+++  EM   
Sbjct: 419 LTNALCKENRLHEARGFLRDLKWR-HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEK 477

Query: 133 GIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVTL 2
             +P   TY +LI G    G +  A  I+ RML  GC PD +T+
Sbjct: 478 RCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITM 521



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKE-MHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEM 143
           N L+N L R ++VD      +E M L      D  ++   I G C++G++D A  LF EM
Sbjct: 206 NKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DSCSFNILIRGLCRIGKVDKAFELFNEM 263

Query: 142 INFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMG-CHPDVVT 5
             FG  P   TYN LI+GF +  ++     + + +L      PDVVT
Sbjct: 264 RGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVT 310



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/92 (36%), Positives = 44/92 (47%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           N +I+G  +   VD    +L EM  K    PD +TYT  I G+C  GR+ +A  +F  M+
Sbjct: 452 NPVIDGFCKAGNVDEANVILAEMEEKR-CKPDKITYTILIIGHCMKGRLSEAISIFNRML 510

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQ 44
             G  P S T   LI    KAG    A  I Q
Sbjct: 511 GTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ 542


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/105 (62%), Positives = 83/105 (79%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           NTLING  RV+E+ +G +LLKE  L   + PDV+TYTS ISGYCKLG M  AS LF+EM+
Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMV 312

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
           + GI+P+ FT+NVLIDGFGK G+M SA  +Y++MLL+GC PDVVT
Sbjct: 313 SSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVT 357



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           N L+N L + + VD    L +E HL+P  +PDV ++   I G C++G +D A   F+ M 
Sbjct: 183 NNLLNMLVKQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 241

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQR-MLLMGCHPDVVT 5
           NFG  P   +YN LI+GF +  ++     + +  ML+ G  PDV+T
Sbjct: 242 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/104 (36%), Positives = 57/104 (54%)
 Frame = -1

Query: 316 TLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMIN 137
           +LI+G  R  EV++G +L +EM ++ +L P+V TY   I+  CK  R+ +A      + +
Sbjct: 360 SLIDGYCREGEVNQGLKLWEEMKVR-NLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418

Query: 136 FGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
             + P  F YN +IDGF KAG +  A  I   M    C PD +T
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKIT 462



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = -1

Query: 313 LINGLFRVHEVDRGRELLKEMHLKP-DLLPDVVTYTSAISGYCKLGRMDDASILFEEMIN 137
           LIN L + + +   R  L+  HLK  +++P    Y   I G+CK G++D+A+ +  EM  
Sbjct: 396 LINALCKENRIREARNFLR--HLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE 453

Query: 136 FGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVTL 2
              RP   T+ +LI G    G M  A   + +M+ + C PD +T+
Sbjct: 454 KKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITI 498


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/105 (62%), Positives = 83/105 (79%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           NTLING  RV+E+ +G +LLKE  L   + PDV+TYTS ISGYCKLG M  AS LF+EM+
Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMV 312

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
           + GI+P+ FT+NVLIDGFGK G+M SA  +Y++MLL+GC PDVVT
Sbjct: 313 SSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVT 357



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           N L+N L + + VD    L +E HL+P  +PDV ++   I G C++G +D A   F+ M 
Sbjct: 183 NNLLNMLVKQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMG 241

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQR-MLLMGCHPDVVT 5
           NFG  P   +YN LI+GF +  ++     + +  ML+ G  PDV+T
Sbjct: 242 NFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVIT 287



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/104 (36%), Positives = 57/104 (54%)
 Frame = -1

Query: 316 TLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMIN 137
           +LI+G  R  EV++G +L +EM ++ +L P+V TY   I+  CK  R+ +A      + +
Sbjct: 360 SLIDGYCREGEVNQGLKLWEEMKVR-NLSPNVYTYAVLINALCKENRIREARNFLRHLKS 418

Query: 136 FGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
             + P  F YN +IDGF KAG +  A  I   M    C PD +T
Sbjct: 419 SEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKIT 462



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = -1

Query: 313 LINGLFRVHEVDRGRELLKEMHLKP-DLLPDVVTYTSAISGYCKLGRMDDASILFEEMIN 137
           LIN L + + +   R  L+  HLK  +++P    Y   I G+CK G++D+A+ +  EM  
Sbjct: 396 LINALCKENRIREARNFLR--HLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQE 453

Query: 136 FGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVTL 2
              RP   T+ +LI G    G M  A   + +M+ + C PD +T+
Sbjct: 454 KKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITI 498


>ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/105 (59%), Positives = 80/105 (76%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           NTLI+GL  ++EVDR R LL+E+ L  +  PDVV+YT  ISGYCKL +M++ S+LF+EMI
Sbjct: 216 NTLIHGLCLINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMI 275

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
           N G  P++FT+N LIDGFGK GDM SA  +Y +ML+ GC PDV T
Sbjct: 276 NSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVAT 320



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/106 (32%), Positives = 60/106 (56%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           + L++GL   + + + R++L+ ++ + D++P    Y   I GYCK G +D+A+ +  EM 
Sbjct: 357 SVLVSGLCNNNRLHKARDILRLLN-ESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEME 415

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVTL 2
               +P   T+ +LI G    G M  A G + +ML +GC PD +T+
Sbjct: 416 VNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITV 461



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/104 (32%), Positives = 56/104 (53%)
 Frame = -1

Query: 316 TLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMIN 137
           +LING FRV +V +  ++  +M+ K ++   + TY+  +SG C   R+  A  +   +  
Sbjct: 323 SLINGHFRVRQVHQAMDMWHKMNEK-NIGASLYTYSVLVSGLCNNNRLHKARDILRLLNE 381

Query: 136 FGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
             I P  F YN +IDG+ K+G++  A  I   M +  C PD +T
Sbjct: 382 SDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLT 425


>ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/105 (57%), Positives = 79/105 (75%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           NTLI+GL R++EVDR R LLKE+ L  +  PDVV+YT+ ISGYCK  +M++ ++LF EMI
Sbjct: 215 NTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMI 274

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
             G  P++FT+N LI GFGK GDM SA  +Y++ML+ GC PDV T
Sbjct: 275 RSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVAT 319



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/106 (33%), Positives = 61/106 (57%)
 Frame = -1

Query: 319 NTLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMI 140
           + L++GL   + + + R++L+ ++ + D++P    Y   I GYCK G +D+A+ +  EM 
Sbjct: 356 SVLVSGLCNNNRLHKARDILRLLN-ESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEME 414

Query: 139 NFGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVTL 2
               +P   T+ +LI G    G M  A GI+ +ML +GC PD +T+
Sbjct: 415 VNRCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITV 460



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/104 (30%), Positives = 56/104 (53%)
 Frame = -1

Query: 316 TLINGLFRVHEVDRGRELLKEMHLKPDLLPDVVTYTSAISGYCKLGRMDDASILFEEMIN 137
           +LING FR+ +V +  ++  +M+ K ++   + T++  +SG C   R+  A  +   +  
Sbjct: 322 SLINGYFRLGQVHQAMDMWHKMNDK-NIGATLYTFSVLVSGLCNNNRLHKARDILRLLNE 380

Query: 136 FGIRPSSFTYNVLIDGFGKAGDMGSAEGIYQRMLLMGCHPDVVT 5
             I P  F YN +IDG+ K+G++  A  I   M +  C PD +T
Sbjct: 381 SDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLT 424