BLASTX nr result

ID: Cimicifuga21_contig00012894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012894
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276973.1| PREDICTED: uncharacterized protein LOC100258...   213   8e-53
ref|XP_002519204.1| zinc finger protein, putative [Ricinus commu...   206   8e-51
gb|ABK22837.1| unknown [Picea sitchensis]                             206   8e-51
ref|XP_002314930.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-50
ref|XP_003550600.1| PREDICTED: uncharacterized protein LOC100791...   205   2e-50

>ref|XP_002276973.1| PREDICTED: uncharacterized protein LOC100258605 [Vitis vinifera]
          Length = 261

 Score =  213 bits (542), Expect = 8e-53
 Identities = 109/147 (74%), Positives = 116/147 (78%)
 Frame = +2

Query: 239 MSSKKEEKAQVAADRIKVAALTAAKGLSXXXXXXXXXXXXXNVNAYGQKEEGPSRWQERK 418
           MSSKKEEKAQ AA+RIK AALTAAKGLS             NVNAYGQKEEGPSRWQE++
Sbjct: 1   MSSKKEEKAQAAAERIKAAALTAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 419 EAKRQMYLMSTEKAVKLGERKDLKXXXXXXXXXXXXQCQKCFQSGHWTYECKNERVYIPR 598
           EAKRQMYLMSTEKAV LGERKDLK            QCQKCFQ+GHWTYECKNERVYI R
Sbjct: 61  EAKRQMYLMSTEKAVILGERKDLK-TTMSTIGGTSSQCQKCFQTGHWTYECKNERVYISR 119

Query: 599 PSRTQQLKNPKLKMKLSVSYEFDVPDI 679
           PSRTQQLKNPKL+MKLS+SY+ D PDI
Sbjct: 120 PSRTQQLKNPKLRMKLSISYDLDNPDI 146


>ref|XP_002519204.1| zinc finger protein, putative [Ricinus communis]
           gi|223541519|gb|EEF43068.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 257

 Score =  206 bits (525), Expect = 8e-51
 Identities = 104/146 (71%), Positives = 114/146 (78%)
 Frame = +2

Query: 239 MSSKKEEKAQVAADRIKVAALTAAKGLSXXXXXXXXXXXXXNVNAYGQKEEGPSRWQERK 418
           MSSKKEEK Q AADRIK AAL+AAKGLS             NVNAYGQKEEGPSRWQE++
Sbjct: 1   MSSKKEEKNQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 419 EAKRQMYLMSTEKAVKLGERKDLKXXXXXXXXXXXXQCQKCFQSGHWTYECKNERVYIPR 598
           EAKRQMYLMSTEK V+LGERKDLK            QCQKCFQ+GHWT+ECKNERVY+ R
Sbjct: 61  EAKRQMYLMSTEKQVRLGERKDLK--SSMATAGGTAQCQKCFQTGHWTFECKNERVYMAR 118

Query: 599 PSRTQQLKNPKLKMKLSVSYEFDVPD 676
           PSRTQQLKNPKL+MKLS+SY+ D PD
Sbjct: 119 PSRTQQLKNPKLRMKLSISYDLDNPD 144


>gb|ABK22837.1| unknown [Picea sitchensis]
          Length = 294

 Score =  206 bits (525), Expect = 8e-51
 Identities = 107/146 (73%), Positives = 111/146 (76%)
 Frame = +2

Query: 239 MSSKKEEKAQVAADRIKVAALTAAKGLSXXXXXXXXXXXXXNVNAYGQKEEGPSRWQERK 418
           MSS K+E AQ AADRIK AAL AAKGLS             NVNAYGQKEEGPSRWQERK
Sbjct: 1   MSSNKDEAAQAAADRIKAAALGAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQERK 60

Query: 419 EAKRQMYLMSTEKAVKLGERKDLKXXXXXXXXXXXXQCQKCFQSGHWTYECKNERVYIPR 598
           EAKRQMYLMSTEKAVKLG RKDLK            QCQKCFQSGHWTYECKNERVY+ R
Sbjct: 61  EAKRQMYLMSTEKAVKLGVRKDLK--PTPSSRGSAQQCQKCFQSGHWTYECKNERVYMSR 118

Query: 599 PSRTQQLKNPKLKMKLSVSYEFDVPD 676
           PSRTQQLKNPKLKM++SV YE D PD
Sbjct: 119 PSRTQQLKNPKLKMRISVPYELDNPD 144


>ref|XP_002314930.1| predicted protein [Populus trichocarpa] gi|222863970|gb|EEF01101.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  206 bits (524), Expect = 1e-50
 Identities = 103/146 (70%), Positives = 116/146 (79%)
 Frame = +2

Query: 239 MSSKKEEKAQVAADRIKVAALTAAKGLSXXXXXXXXXXXXXNVNAYGQKEEGPSRWQERK 418
           MSSKKEEK+QVAA+RIK AAL+AAKGLS             NVNAYGQKEEGPSRWQE++
Sbjct: 1   MSSKKEEKSQVAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 419 EAKRQMYLMSTEKAVKLGERKDLKXXXXXXXXXXXXQCQKCFQSGHWTYECKNERVYIPR 598
           EAKRQMYLMSTEKAV+LGERKDL             QCQKCFQSGHWTYECKNERVY+ R
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLN--SMSKGFGGNAQCQKCFQSGHWTYECKNERVYMSR 118

Query: 599 PSRTQQLKNPKLKMKLSVSYEFDVPD 676
           PSRTQQLKNPKL+MK+S+SY+ + P+
Sbjct: 119 PSRTQQLKNPKLRMKVSISYDLENPE 144


>ref|XP_003550600.1| PREDICTED: uncharacterized protein LOC100791564 [Glycine max]
          Length = 259

 Score =  205 bits (521), Expect = 2e-50
 Identities = 105/148 (70%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
 Frame = +2

Query: 239 MSSKKEEKAQVAADRIKVAALTAAKGLSXXXXXXXXXXXXXNVNAYGQKEEGPSRWQERK 418
           MSSKKEEK+Q AA+RIK AAL+AAKGLS             NVNAYGQKEEGPSRWQE++
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 419 EAKRQMYLMSTEKAVKLGERKDLKXXXXXXXXXXXXQCQKCFQSGHWTYECKNERVYIPR 598
           EAKRQMYLMSTEKAVKLGERKDLK            QCQKCFQSGHWTYECKNERVYI R
Sbjct: 61  EAKRQMYLMSTEKAVKLGERKDLK--PAMSAAGGLAQCQKCFQSGHWTYECKNERVYISR 118

Query: 599 PSRTQQLKNPKLKMKLSVSYEFD--VPD 676
           PSRTQQLKNPKL++ +SV+Y+ D  +PD
Sbjct: 119 PSRTQQLKNPKLRVNVSVTYDLDDNIPD 146


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