BLASTX nr result

ID: Cimicifuga21_contig00012873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012873
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533410.1| conserved hypothetical protein [Ricinus comm...   458   e-126
ref|XP_004155030.1| PREDICTED: carbon catabolite repressor prote...   437   e-120
ref|NP_683491.2| carbon catabolite repressor protein 4-like 5 [A...   437   e-120
ref|XP_003543162.1| PREDICTED: carbon catabolite repressor prote...   436   e-120
ref|XP_002887512.1| endonuclease/exonuclease/phosphatase family ...   431   e-118

>ref|XP_002533410.1| conserved hypothetical protein [Ricinus communis]
            gi|223526739|gb|EEF28968.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 447

 Score =  458 bits (1179), Expect = e-126
 Identities = 221/373 (59%), Positives = 284/373 (76%), Gaps = 15/373 (4%)
 Frame = +1

Query: 259  SRKWAFSPQDCSHLKDEIVVVSYNILGVENAENHPDLYHKVAPHYLNWEFRKMRLRQELS 438
            +R+W FS  D S  KD +VVVSYNILGVENA NHPDLY K+ P +L+W+ RK  + +E++
Sbjct: 75   NRRWVFSDNDFSAYKDRVVVVSYNILGVENASNHPDLYFKIPPKFLDWDRRKELICEEIN 134

Query: 439  CYNASILCLQEVDRFPDLANLLKEDGFNGIYKARTGEACDGCAIFWREDLFTLMHQESIE 618
             YNA ILC QEVDRF DL  LL+ED F G+YKARTGEACDGCAIFW++ LF+L+H+E+IE
Sbjct: 135  HYNAGILCFQEVDRFDDLDCLLQEDSFRGVYKARTGEACDGCAIFWKDMLFSLLHEENIE 194

Query: 619  FRDFNLRDNVAQFCVLKMKSNTSNKD---AKAQTSQAQTLLIGNIHALYNPKRGDIKMGQ 789
            F+ F LR+NVAQ CVLKM  + S  D     ++TS+++  ++GN+H L+NPKRGDIK+GQ
Sbjct: 195  FQSFGLRNNVAQLCVLKMNESQSKSDQFMQSSETSKSRRFVVGNVHVLFNPKRGDIKLGQ 254

Query: 790  IRLFVKKAHTLSEEWGNIPVVIAGDLNSTPQSAIYKFLASSELDLLRHNRRELSGQIE-- 963
            +RLF+++A+ LS+EWG IPVV+ GDLNS PQSA+Y+FLASSEL++L H+RR +SGQ++  
Sbjct: 255  VRLFLERAYKLSQEWGGIPVVLGGDLNSLPQSAVYQFLASSELNILVHDRRNISGQLDHL 314

Query: 964  -GRQKWSSSRAHAEIE---------SSWSKEELQLAAGSEEVTHLRHYLQLRSAYVGVPG 1113
               + + S   +AE            +W+ EE+ LA G + VTHL H L+L SAY GVPG
Sbjct: 315  PQHEYFKSQNKNAESNHRSISRPSIHTWNDEEVSLATGRKGVTHLCHQLKLGSAYHGVPG 374

Query: 1114 SSSTRDECGEPLATSYHSKFMGTVDYIWHSKDLVPVGVIETLPNNILRNMRGLPTEEWGS 1293
            S  TRD  GEPLATSYHS FMGTVDYIWH+++L+PV V+ETLP +ILR   GLP E+WGS
Sbjct: 375  SRRTRDNHGEPLATSYHSMFMGTVDYIWHTQELIPVRVLETLPIDILRRSAGLPNEKWGS 434

Query: 1294 DHFALVCKLAFAD 1332
            DH ALVC+LAFAD
Sbjct: 435  DHLALVCELAFAD 447


>ref|XP_004155030.1| PREDICTED: carbon catabolite repressor protein 4 homolog 5-like
            [Cucumis sativus]
          Length = 462

 Score =  437 bits (1125), Expect = e-120
 Identities = 213/375 (56%), Positives = 273/375 (72%), Gaps = 13/375 (3%)
 Frame = +1

Query: 256  GSRKWAFSPQDCSHLKDEIVVVSYNILGVENAENHPDLYHKVAPHYLNWEFRKMRLRQEL 435
            G R+W +S +DCS   D+ +V SYNILGVENA NHPDLYH+V   +L+W FRK  +   +
Sbjct: 88   GHRRWVYSARDCSRFIDKFMVASYNILGVENALNHPDLYHRVPSKFLDWSFRKELICNAI 147

Query: 436  SCYNASILCLQEVDRFPDLANLLKEDGFNGIYKARTGEACDGCAIFWREDLFTLMHQESI 615
              YNA ILCLQEVDRF DL  L +  G+ G+YKARTGEA DGCA+FW + LF+L+HQE+I
Sbjct: 148  KFYNAGILCLQEVDRFDDLDELFQNYGYKGVYKARTGEANDGCAVFWIDKLFSLLHQETI 207

Query: 616  EFRDFNLRDNVAQFCVLKMKS-NTSNKDAKAQTSQAQTLLIGNIHALYNPKRGDIKMGQI 792
            EF++F LR+NVAQ CVLK               + +++ +IGNIH L+NP RGDIK+GQ+
Sbjct: 208  EFQNFGLRNNVAQLCVLKSHCLFFLLTSMHVFINCSRSFVIGNIHVLFNPNRGDIKLGQV 267

Query: 793  RLFVKKAHTLSEEWGNIPVVIAGDLNSTPQSAIYKFLASSELDLLRHNRRELSGQIE--- 963
            RLF++KAH+LS+ WGN+PV+IAGDLNS P+SAIY+FLASSELD+  H+RR++SGQ++   
Sbjct: 268  RLFLEKAHSLSQRWGNVPVIIAGDLNSIPKSAIYQFLASSELDIQLHDRRKISGQLDFSS 327

Query: 964  ---------GRQKWSSSRAHAEIESSWSKEELQLAAGSEEVTHLRHYLQLRSAYVGVPGS 1116
                     G  KWS+          WS EE+++A+GSE VT L+H L+L SAY G+PGS
Sbjct: 328  SHGAFRFCSGGTKWSNVSTSKSF--GWSDEEIRIASGSENVTRLQHPLKLSSAYYGIPGS 385

Query: 1117 SSTRDECGEPLATSYHSKFMGTVDYIWHSKDLVPVGVIETLPNNILRNMRGLPTEEWGSD 1296
              TRD  GEPL TS+HSKFMGTVDYIWHS+ L PV V+ETLP + L+   GLP E+WGSD
Sbjct: 386  YKTRDTNGEPLVTSFHSKFMGTVDYIWHSEKLAPVRVLETLPVDALKKTGGLPNEKWGSD 445

Query: 1297 HFALVCKLAFADEKN 1341
            H ALVC+LAF D++N
Sbjct: 446  HLALVCELAFDDDEN 460


>ref|NP_683491.2| carbon catabolite repressor protein 4-like 5 [Arabidopsis thaliana]
            gi|215275263|sp|Q0WKY2.2|CCR4E_ARATH RecName: Full=Carbon
            catabolite repressor protein 4 homolog 5; Short=CCR4
            homolog 5 gi|332197398|gb|AEE35519.1| carbon catabolite
            repressor protein 4-like 5 [Arabidopsis thaliana]
          Length = 454

 Score =  437 bits (1124), Expect = e-120
 Identities = 211/369 (57%), Positives = 274/369 (74%), Gaps = 11/369 (2%)
 Frame = +1

Query: 262  RKWAFSPQDCSHLKDEIVVVSYNILGVENAENHPDLYHKVAPHYLNWEFRKMRLRQELSC 441
            R+W FS  +  +L D++V+VSYN+LGV+NA NH DLY+ V   +L W  RK  + +E+S 
Sbjct: 84   REWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISR 143

Query: 442  YNASILCLQEVDRFPDLANLLKEDGFNGIYKARTGEACDGCAIFWREDLFTLMHQESIEF 621
            YNASILCLQEVDRF DL  LLK  GF G++K+RTGEA DGCAIFW+E+LF L+  + IEF
Sbjct: 144  YNASILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEF 203

Query: 622  RDFNLRDNVAQFCVLKMKSNTSNKD-AKAQTSQAQTLLIGNIHALYNPKRGDIKMGQIRL 798
              F +R+NVAQ CVL+M      K   + ++S  + L++GNIH L+NPKRGDIK+GQ+RL
Sbjct: 204  DKFGMRNNVAQLCVLEMNCEEDPKSKLRVRSSDPRRLVVGNIHVLFNPKRGDIKLGQVRL 263

Query: 799  FVKKAHTLSEEWGNIPVVIAGDLNSTPQSAIYKFLASSELDLLRHNRRELSGQIEGRQKW 978
            F++KA+ LS+EWGNIPV IAGDLNSTPQSAIY F+AS++LD   H+RR++SGQ E   K 
Sbjct: 264  FLEKAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIASADLDTQLHDRRQISGQTEVEPKE 323

Query: 979  SSSRAHAEIESS----------WSKEELQLAAGSEEVTHLRHYLQLRSAYVGVPGSSSTR 1128
             S R H    +S          WS+EELQLA G +E TH++H L+L SAY GVPG+  TR
Sbjct: 324  RSFRNHYAFSASASISGSLLNEWSQEELQLATGGQETTHVQHQLKLNSAYSGVPGTYRTR 383

Query: 1129 DECGEPLATSYHSKFMGTVDYIWHSKDLVPVGVIETLPNNILRNMRGLPTEEWGSDHFAL 1308
            D+ GEPLAT+YHS+F+GTVDYIWH+K+LVPV V+ETLP ++LR   GLP+E WGSDH A+
Sbjct: 384  DQRGEPLATTYHSRFLGTVDYIWHTKELVPVRVLETLPADVLRRTGGLPSENWGSDHLAI 443

Query: 1309 VCKLAFADE 1335
             C+L F ++
Sbjct: 444  ACELGFVND 452


>ref|XP_003543162.1| PREDICTED: carbon catabolite repressor protein 4 homolog 5-like
            [Glycine max]
          Length = 405

 Score =  436 bits (1122), Expect = e-120
 Identities = 215/375 (57%), Positives = 274/375 (73%), Gaps = 15/375 (4%)
 Frame = +1

Query: 262  RKWAFSPQDCSHLKDEIVVVSYNILGVENAENHPDLYHKVAPHYLNWEFRKMRLRQELSC 441
            R+W  S +D S+  D+++VVSYNILGVENA NHPDLY  +   +L W+ RK  + +E++ 
Sbjct: 29   RRWVVSSKDSSNCTDKVLVVSYNILGVENASNHPDLYSNIPHSFLEWDRRKRLILEEINN 88

Query: 442  YNASILCLQEVDRFPDLANLLKEDGFNGIYKARTGEACDGCAIFWREDLFTLMHQESIEF 621
            YNASILC QEVD F DL +L +  GF G+YKARTGEA DGCA+FW++ LF L+HQE IEF
Sbjct: 89   YNASILCFQEVDHFNDLDDLFQNSGFKGVYKARTGEAQDGCAVFWKDKLFKLLHQEDIEF 148

Query: 622  RDFNLRDNVAQFCVL-----KMKSNTSNKDAKAQTSQAQTLLIGNIHALYNPKRGDIKMG 786
            + F +R+NVAQ CV      K +S+  N      ++  +  ++GNIH L+NP RGDIK+G
Sbjct: 149  QRFGMRNNVAQLCVFEANHDKKESDACNLTTMTPSTGKRRFVVGNIHVLFNPNRGDIKLG 208

Query: 787  QIRLFVKKAHTLSEEWGNIPVVIAGDLNSTPQSAIYKFLASSELDLLRHNRRELSGQIE- 963
            Q+RL + KA+ LS+EWGNIPV+IAGDLNS PQSAIYKFL+SS+LD+  H+RR +SGQ+E 
Sbjct: 209  QVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEI 268

Query: 964  --GRQKWSSSRAHAEIESS-------WSKEELQLAAGSEEVTHLRHYLQLRSAYVGVPGS 1116
               R   S     A I  S       WS EEL+LA+G+E VT L+H L+L SAY GVPG+
Sbjct: 269  QTNRVFRSQIGDDASISMSVSRQLYRWSVEELRLASGAEGVTRLQHQLKLCSAYSGVPGN 328

Query: 1117 SSTRDECGEPLATSYHSKFMGTVDYIWHSKDLVPVGVIETLPNNILRNMRGLPTEEWGSD 1296
              TRD+ GEPLATSYHSKFMGTVDYIWHS+DL+PV V+ETLP + LR  RGLP+E+WGSD
Sbjct: 329  HRTRDDIGEPLATSYHSKFMGTVDYIWHSEDLIPVRVLETLPIDTLRRSRGLPSEKWGSD 388

Query: 1297 HFALVCKLAFADEKN 1341
            H A+VC+ AFA+  N
Sbjct: 389  HLAVVCEFAFANNAN 403


>ref|XP_002887512.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297333353|gb|EFH63771.1|
            endonuclease/exonuclease/phosphatase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 453

 Score =  431 bits (1109), Expect = e-118
 Identities = 208/372 (55%), Positives = 272/372 (73%), Gaps = 14/372 (3%)
 Frame = +1

Query: 262  RKWAFSPQDCSHLKDEIVVVSYNILGVENAENHPDLYHKVAPHYLNWEFRKMRLRQELSC 441
            R+W FS  +  +LK+++V+VSYN+LGV+NA NH DLY+ V P +L W  RK  + +E+S 
Sbjct: 80   REWVFSTNNFENLKEKLVLVSYNLLGVDNASNHMDLYYNVPPKHLEWSRRKHLICKEISR 139

Query: 442  YNASILCLQ----EVDRFPDLANLLKEDGFNGIYKARTGEACDGCAIFWREDLFTLMHQE 609
            YNASILCLQ    EVDRF DL  LLK  GF G++K RTGEA DGCAIFW+E LF L+  +
Sbjct: 140  YNASILCLQASSGEVDRFDDLDVLLKNRGFQGVHKRRTGEASDGCAIFWKEKLFKLLDHQ 199

Query: 610  SIEFRDFNLRDNVAQFCVLKMKSNTSNKDAKAQTSQAQTLLIGNIHALYNPKRGDIKMGQ 789
             IEF  F +R+NVAQ CVL+M         + ++S  Q L++GNIH L+NPKRGDIK+GQ
Sbjct: 200  HIEFDKFGMRNNVAQLCVLEMNCEDPKSKLRVRSSDPQRLVVGNIHVLFNPKRGDIKLGQ 259

Query: 790  IRLFVKKAHTLSEEWGNIPVVIAGDLNSTPQSAIYKFLASSELDLLRHNRRELSGQIEGR 969
            +RLF++KA+ LS+EWGNIPV IAGDLNSTPQSAIY F+AS++LD   H+RR++SGQ E  
Sbjct: 260  VRLFLEKAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIASADLDTQLHDRRQISGQGEVE 319

Query: 970  QKWSSSRAH----------AEIESSWSKEELQLAAGSEEVTHLRHYLQLRSAYVGVPGSS 1119
             +  S R H            + + WS+EELQLA G +  T ++H L+L SAY GVPG+ 
Sbjct: 320  PEERSFRNHYAFSASVSISGSLPNEWSQEELQLATGGQATTRVQHQLKLHSAYSGVPGTY 379

Query: 1120 STRDECGEPLATSYHSKFMGTVDYIWHSKDLVPVGVIETLPNNILRNMRGLPTEEWGSDH 1299
             TRD+ GEPLAT+YHS+F+GTVDYIWH+K+LVPV V+ETLP ++LR   GLP+E+WGSDH
Sbjct: 380  RTRDQRGEPLATTYHSRFLGTVDYIWHTKELVPVRVLETLPTDVLRRTGGLPSEKWGSDH 439

Query: 1300 FALVCKLAFADE 1335
             A+ C+L F ++
Sbjct: 440  LAIACELGFVND 451


Top