BLASTX nr result

ID: Cimicifuga21_contig00012860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012860
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    75   2e-11
gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thali...    70   7e-10
gb|AAD28679.1| En/Spm-like transposon protein [Arabidopsis thali...    66   8e-09
ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...    65   1e-08
ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [...    65   1e-08

>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 35/83 (42%), Positives = 51/83 (61%)
 Frame = +2

Query: 245  KRQLVNWVKPGEIVAEGRWATSDPNTVVHCKRLGNNGSRVWVGKALIPSTLLWRSPNFEM 424
            K ++++W   GE+VAEGRW+++DP  +VH   LG    +VWV         LWR PN EM
Sbjct: 1080 KCKMLDWCGTGEVVAEGRWSSNDPKVIVHHVPLGPQAVKVWVDLPKRSDAFLWR-PNSEM 1138

Query: 425  KTIGEAVDTAIAWPKDHLIVEDY 493
              I +AV +A+AWP D +++  Y
Sbjct: 1139 HYIKDAVGSAVAWPLDKVVMSMY 1161


>gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 781

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = +2

Query: 233 KEGCKRQLVNWVKPGEIVAEGRWATSDPNTVVHCKRLGNNGSRVWVGKALIPSTLLWRSP 412
           KE  K +L++      +VAEGRWAT+DP   VH   LG+N  +VWV    +    +WR P
Sbjct: 698 KENMKCKLMDITGKKRVVAEGRWATNDPKQKVHFVPLGDNVVKVWVDIVKVSDVKVWR-P 756

Query: 413 NFEMKTIGEAVDTAIAWPKDHLIV 484
           + E++ + +A+ TAIAWP+D +I+
Sbjct: 757 SDEVEIMEDALGTAIAWPEDKVIM 780



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 35/77 (45%), Positives = 43/77 (55%)
 Frame = +2

Query: 254 LVNWVKPGEIVAEGRWATSDPNTVVHCKRLGNNGSRVWVGKALIPSTLLWRSPNFEMKTI 433
           LVNW  P +I+ EGR  +SDP+ VV+  RLG    +V V  A  P   LWR P   M TI
Sbjct: 524 LVNWSGPEDIIGEGRILSSDPDDVVNDCRLGPVDLKVLVEAANTPDAFLWR-PAPNMYTI 582

Query: 434 GEAVDTAIAWPKDHLIV 484
            EAV   IAWP    ++
Sbjct: 583 TEAVGQMIAWPASKCVL 599


>gb|AAD28679.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 352

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 35/78 (44%), Positives = 48/78 (61%)
 Frame = +2

Query: 245 KRQLVNWVKPGEIVAEGRWATSDPNTVVHCKRLGNNGSRVWVGKALIPSTLLWRSPNFEM 424
           KR L++    GEIVAEGR  +++P   VH   LG + S+VWV    I S  +WR PN E+
Sbjct: 273 KRLLLDCNGSGEIVAEGRICSTNPEDKVHFVPLGPDASKVWVQVLKIGSAKVWR-PNSEV 331

Query: 425 KTIGEAVDTAIAWPKDHL 478
             +G+A+ T +AWP D L
Sbjct: 332 HFVGDALGTTVAWPNDRL 349


>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +2

Query: 77  EEVPIYATWDERVIDIQGEPQKVLKALEAVLGHLRKFLVDQCV 205
           +EVP YA  DER++++QGE  KVLKALEAV+GHLRKFLVD  V
Sbjct: 176 DEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSV 218


>ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +2

Query: 77  EEVPIYATWDERVIDIQGEPQKVLKALEAVLGHLRKFLVDQCV 205
           +EVP YA  DER++++QGE  KVLKALEAV+GHLRKFLVD  V
Sbjct: 176 DEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSV 218


Top