BLASTX nr result

ID: Cimicifuga21_contig00012853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012853
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-65
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l...   251   4e-65
emb|CBI39064.3| unnamed protein product [Vitis vinifera]              251   4e-65
ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ric...   244   4e-63
ref|NP_001185451.1| putative GTP-binding protein [Arabidopsis th...   244   5e-63

>ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|222844207|gb|EEE81754.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  253 bits (646), Expect = 1e-65
 Identities = 116/131 (88%), Positives = 128/131 (97%)
 Frame = -3

Query: 397 DLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHITVNYQRFQVTDTPG 218
           DLETPTLCLVGAPNVGKSSLVR+LSTGKPEVCNYPFTTRGILMGHI +N+Q FQVTDTPG
Sbjct: 154 DLETPTLCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIALNFQHFQVTDTPG 213

Query: 217 LLKRYDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQYIIYKEVRERFSNHLW 38
           LLKR D+DRNNLEKLTLAVLSHLPTA+LYVHDLTGECGTSPSDQ++IYKE+++RFSNHLW
Sbjct: 214 LLKRCDEDRNNLEKLTLAVLSHLPTAILYVHDLTGECGTSPSDQFVIYKEIKQRFSNHLW 273

Query: 37  IDVVSKCDLLQ 5
           +DVVSKCD+LQ
Sbjct: 274 LDVVSKCDILQ 284


>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
          Length = 445

 Score =  251 bits (641), Expect = 4e-65
 Identities = 117/131 (89%), Positives = 126/131 (96%)
 Frame = -3

Query: 397 DLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHITVNYQRFQVTDTPG 218
           DLETPTLCLVGAPNVGKSSLVR+LSTGKPEVCNYPFTTRGILMGHI  NY+ FQVTDTPG
Sbjct: 243 DLETPTLCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPG 302

Query: 217 LLKRYDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQYIIYKEVRERFSNHLW 38
           LL R+DD+RNNLEKLTLAVLSHLPTA+LYVHDL+GECGTSPSDQ+ IYKE+RERFS+HLW
Sbjct: 303 LLNRHDDERNNLEKLTLAVLSHLPTAILYVHDLSGECGTSPSDQFFIYKEIRERFSDHLW 362

Query: 37  IDVVSKCDLLQ 5
           IDVVSKCDLLQ
Sbjct: 363 IDVVSKCDLLQ 373


>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  251 bits (641), Expect = 4e-65
 Identities = 117/131 (89%), Positives = 126/131 (96%)
 Frame = -3

Query: 397 DLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHITVNYQRFQVTDTPG 218
           DLETPTLCLVGAPNVGKSSLVR+LSTGKPEVCNYPFTTRGILMGHI  NY+ FQVTDTPG
Sbjct: 243 DLETPTLCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPG 302

Query: 217 LLKRYDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQYIIYKEVRERFSNHLW 38
           LL R+DD+RNNLEKLTLAVLSHLPTA+LYVHDL+GECGTSPSDQ+ IYKE+RERFS+HLW
Sbjct: 303 LLNRHDDERNNLEKLTLAVLSHLPTAILYVHDLSGECGTSPSDQFFIYKEIRERFSDHLW 362

Query: 37  IDVVSKCDLLQ 5
           IDVVSKCDLLQ
Sbjct: 363 IDVVSKCDLLQ 373


>ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis]
           gi|223534184|gb|EEF35900.1| nucleolar GTP-binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  244 bits (624), Expect = 4e-63
 Identities = 114/131 (87%), Positives = 126/131 (96%)
 Frame = -3

Query: 397 DLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHITVNYQRFQVTDTPG 218
           +LETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHI  ++Q FQVTDTPG
Sbjct: 245 NLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHIAFDFQHFQVTDTPG 304

Query: 217 LLKRYDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQYIIYKEVRERFSNHLW 38
           LLKR D+DRNNLEKLTLAVL+HLPTA+LYVHDLTGECGTS SDQ++IYKE++ERFS+HLW
Sbjct: 305 LLKRCDEDRNNLEKLTLAVLTHLPTAILYVHDLTGECGTSASDQFVIYKEIKERFSDHLW 364

Query: 37  IDVVSKCDLLQ 5
           +DVVSKCDLLQ
Sbjct: 365 LDVVSKCDLLQ 375


>ref|NP_001185451.1| putative GTP-binding protein [Arabidopsis thaliana]
           gi|332198326|gb|AEE36447.1| putative GTP-binding protein
           [Arabidopsis thaliana]
          Length = 355

 Score =  244 bits (623), Expect = 5e-63
 Identities = 115/132 (87%), Positives = 125/132 (94%)
 Frame = -3

Query: 397 DLETPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHITVNYQRFQVTDTPG 218
           DLE PTLCLVGAPNVGKSSLVRILSTGKPE+CNYPFTTRGILMGHI +NYQRFQVTDTPG
Sbjct: 154 DLEMPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPG 213

Query: 217 LLKRYDDDRNNLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQYIIYKEVRERFSNHLW 38
           LL+R D+DRNNLEKLTLAVL+HLPTAVLYVHDLTGECGTSPSDQ+ IYKE++ERF ++LW
Sbjct: 214 LLRRCDEDRNNLEKLTLAVLTHLPTAVLYVHDLTGECGTSPSDQFQIYKEMKERFKDYLW 273

Query: 37  IDVVSKCDLLQG 2
           ID VSKCDLL G
Sbjct: 274 IDAVSKCDLLGG 285


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