BLASTX nr result

ID: Cimicifuga21_contig00012825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012825
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal...    78   2e-12
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    69   8e-10
dbj|BAG12304.1| 6b-interacting protein 2 [Nicotiana tabacum]           62   1e-07
gb|AFW86385.1| hypothetical protein ZEAMMB73_884712 [Zea mays]         62   2e-07
gb|AFW86384.1| hypothetical protein ZEAMMB73_884712 [Zea mays]         62   2e-07

>dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana]
          Length = 1516

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
 Frame = +1

Query: 82   WDIFVDNQSTPVAQARRRAGKFARQAMKTPHTSGRTGAARTAEALKK--GNPFATVTRTD 255
            W+ +V N+ T   +      +  R+A + PHT+ R G    A  +KK   NP   VTR+ 
Sbjct: 1045 WNSWVKNRKTTAFKEISDKYRMLRKA-QIPHTTSRKGMISLAHEMKKKSSNP-KLVTRSK 1102

Query: 256  LYLAMHSRKDGSCPTPELADKVEQIKAIAKQDPSSVNLDVDHDPVAQVCGPEKKGFVRGM 435
            +++A H+  DG    PE A+ +E+IK+I  +  SS   D+  D V+QV G +K G +RGM
Sbjct: 1103 VWIAGHTHSDGRPVKPEFAETIEKIKSIDSEMDSSSFTDLKEDAVSQVLGKDKPGRLRGM 1162

Query: 436  GIGVSKTEL 462
            G GV+ T+L
Sbjct: 1163 GRGVTATKL 1171


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 3/158 (1%)
 Frame = +1

Query: 1   LRSKHYDIYDTDAERKRNCPDGVRQELWDIFVDNQSTPVAQARRRAGKFARQAMKTPHTS 180
           L+S+HY  + TD ER  +    V  E W I +   ++  AQ R    K  R   K+ HT+
Sbjct: 93  LKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQLRSAKNKANRSNQKSTHTA 152

Query: 181 GRTGAARTAEALK-KGNPFATVTRTDLYLAMHSRKDGSCPTPELADKVEQIK--AIAKQD 351
           G    AR  E  + K +     TR +LY+   +RKDG       A+ + +++     KQ 
Sbjct: 153 GSKSFARIREEERTKKSGGKEPTRAELYIKTRTRKDGQPMNNVAAEIISKLREQETQKQQ 212

Query: 352 PSSVNLDVDHDPVAQVCGPEKKGFVRGMGIGVSKTELF 465
            S+ + D D D   QV G EK G VR  G+G + ++L+
Sbjct: 213 TSNDSNDWD-DAFFQVMGEEKNGHVRTYGLGPNPSDLW 249


>dbj|BAG12304.1| 6b-interacting protein 2 [Nicotiana tabacum]
          Length = 424

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 46/143 (32%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
 Frame = +1

Query: 58  PDGVRQELWDIFVD---NQSTPVAQARRRAGKFARQAMKTPHTSGRTGAARTAEAL--KK 222
           P G+ ++ W +F++   N+ T     + R     RQ    PH  G    ART   L  K 
Sbjct: 187 PAGISKDQWALFLNYRLNEKTMEISCKNRVN---RQKQTVPHILGSRSIARTMHELEIKA 243

Query: 223 GNPFATVTRTDLYLAMHSRKDGSCPTPELADKVEQIKAIAKQDPSSVNLDVDHDPVAQVC 402
           G P+   TR  +Y   H +KDGS    E   + EQ+   A    S        D    V 
Sbjct: 244 GRPY---TRGQMYSIAHKKKDGSFVNDEARQRSEQLNMQADGTSSEA------DTYINVW 294

Query: 403 GPEKKGFVRGMGIGVSKTELFLS 471
           G E  G  RGMG GV  ++LF S
Sbjct: 295 GKEHPGRARGMGFGVCPSQLFRS 317


>gb|AFW86385.1| hypothetical protein ZEAMMB73_884712 [Zea mays]
          Length = 658

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
 Frame = +1

Query: 1   LRSKHYDIYDTDAERKRNCPDGVRQELWDIFVDNQSTPVAQARRRAGKFARQAMKTPHTS 180
           L+S H+D + +     +N P GV  + W   V+N  T  +Q    A +      K  HTS
Sbjct: 196 LKSLHFDAHRSKENNLKNVPKGVLDDQWVALVNNWFTTKSQDISEANRINCTKRKATHTS 255

Query: 181 GRTGAARTAEALKKGNPFATVT-RTDLYLAMHSRKDGSCPTPELADKVEQIKAIAKQDPS 357
           G    AR  E +++ +P      R  LY+  H     S  T      V  +K +  Q+PS
Sbjct: 256 GTKSFARNREDMREQDPEKKYPHRAVLYINTHK----SNITKNTNPHVVALKELLVQEPS 311

Query: 358 SVNLDVDH-------DPVAQVCGPEKKGFVRGMGIGVSKTELFLSGPVVDKLQEERRLRL 516
               D  H       D ++Q+ G EK G + G+G+  +  ++F  G     L+      L
Sbjct: 312 LA--DTSHGKVAWKGDALSQILGEEKPGHIHGLGLVPNPDQVF-GGSTSRHLKHLNLTSL 368

Query: 517 SA--EEQIADLREQV 555
            A   E +  LR QV
Sbjct: 369 DATSSEDVVSLRLQV 383


>gb|AFW86384.1| hypothetical protein ZEAMMB73_884712 [Zea mays]
          Length = 589

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
 Frame = +1

Query: 1   LRSKHYDIYDTDAERKRNCPDGVRQELWDIFVDNQSTPVAQARRRAGKFARQAMKTPHTS 180
           L+S H+D + +     +N P GV  + W   V+N  T  +Q    A +      K  HTS
Sbjct: 203 LKSLHFDAHRSKENNLKNVPKGVLDDQWVALVNNWFTTKSQDISEANRINCTKRKATHTS 262

Query: 181 GRTGAARTAEALKKGNPFATVT-RTDLYLAMHSRKDGSCPTPELADKVEQIKAIAKQDPS 357
           G    AR  E +++ +P      R  LY+  H     S  T      V  +K +  Q+PS
Sbjct: 263 GTKSFARNREDMREQDPEKKYPHRAVLYINTHK----SNITKNTNPHVVALKELLVQEPS 318

Query: 358 SVNLDVDH-------DPVAQVCGPEKKGFVRGMGIGVSKTELFLSGPVVDKLQEERRLRL 516
               D  H       D ++Q+ G EK G + G+G+  +  ++F  G     L+      L
Sbjct: 319 LA--DTSHGKVAWKGDALSQILGEEKPGHIHGLGLVPNPDQVF-GGSTSRHLKHLNLTSL 375

Query: 517 SA--EEQIADLREQV 555
            A   E +  LR QV
Sbjct: 376 DATSSEDVVSLRLQV 390


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