BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012816
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146833.1| PREDICTED: charged multivesicular body prote...   320   2e-85
ref|XP_002281282.1| PREDICTED: charged multivesicular body prote...   320   3e-85
ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana] gi|297...   319   5e-85
ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...   319   7e-85
ref|XP_004141672.1| PREDICTED: charged multivesicular body prote...   318   9e-85

>ref|XP_004146833.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449476685|ref|XP_004154806.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  320 bits (821), Expect = 2e-85
 Identities = 167/203 (82%), Positives = 179/203 (88%)
 Frame = +2

Query: 119 MGNTEKLMNQIMELKFTSKSLLRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 298
           MGNTEKL+NQIMELKFT+KSL RQAR                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 299 KRSEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGSIVKSLESSLTTGNLQKMSETMDQ 478
           KR+EQMNYLRL+SRLDAVVARLDTQAKM+TI+KSMGSIVKSLES+L TGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 479 FEKQFVNMEVQAEFMENSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 658
           FEKQFVNMEVQAEFMEN+MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 659 SATTEKVDEDDLSRRLAELKARG 727
           +  TEK+DEDDLSRRLAELKARG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203


>ref|XP_002281282.1| PREDICTED: charged multivesicular body protein 1 [Vitis vinifera]
           gi|147855645|emb|CAN79153.1| hypothetical protein
           VITISV_016190 [Vitis vinifera]
          Length = 202

 Score =  320 bits (820), Expect = 3e-85
 Identities = 172/203 (84%), Positives = 178/203 (87%)
 Frame = +2

Query: 119 MGNTEKLMNQIMELKFTSKSLLRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 298
           MGNTEKLMNQIMELKFTSKSL RQAR                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQARKCEKEEKGEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 299 KRSEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGSIVKSLESSLTTGNLQKMSETMDQ 478
           KR+EQMNYLRL+SRLDAVVARLDTQAKMTTISKSMGSIVKSLES+L TGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 479 FEKQFVNMEVQAEFMENSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 658
           FEKQFVNMEVQAEFME+SMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 659 SATTEKVDEDDLSRRLAELKARG 727
            A  EKVDEDDLSRRLAELKARG
Sbjct: 181 -AKAEKVDEDDLSRRLAELKARG 202


>ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana]
           gi|297839171|ref|XP_002887467.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|5903092|gb|AAD55650.1|AC008017_23 Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|16648963|gb|AAL24333.1| Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|20148689|gb|AAM10235.1| similar to developmental
           protein DG1118 [Arabidopsis thaliana]
           gi|297333308|gb|EFH63726.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332197285|gb|AEE35406.1| SNF7-like protein
           [Arabidopsis thaliana]
          Length = 203

 Score =  319 bits (818), Expect = 5e-85
 Identities = 169/203 (83%), Positives = 177/203 (87%)
 Frame = +2

Query: 119 MGNTEKLMNQIMELKFTSKSLLRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 298
           MGNT+KLMNQI +LKFTSKSL RQ+R                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 299 KRSEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGSIVKSLESSLTTGNLQKMSETMDQ 478
           KRSEQMNYLRLASRLDAVVARLDTQAKMTTI+KSM +IVKSLESSL TGNLQKMSETMD 
Sbjct: 61  KRSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDS 120

Query: 479 FEKQFVNMEVQAEFMENSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 658
           FEKQFVNMEVQAEFMEN+MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 659 SATTEKVDEDDLSRRLAELKARG 727
           + T EKVDEDDLSRRLAELKARG
Sbjct: 181 TKTEEKVDEDDLSRRLAELKARG 203


>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score =  319 bits (817), Expect = 7e-85
 Identities = 168/203 (82%), Positives = 177/203 (87%)
 Frame = +2

Query: 119 MGNTEKLMNQIMELKFTSKSLLRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 298
           MGNTEKLMNQIMELKFTSKSL RQ+R                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 299 KRSEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGSIVKSLESSLTTGNLQKMSETMDQ 478
           KR+EQMNYLRLASRLDAVVARLDTQAKMTTISKSMG+IVKSLESSL TGNLQKMSETMD 
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDS 120

Query: 479 FEKQFVNMEVQAEFMENSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 658
           FEKQFVNMEVQAEFME++MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 659 SATTEKVDEDDLSRRLAELKARG 727
           +   +KVDEDDLSRRLAELKARG
Sbjct: 181 AKEADKVDEDDLSRRLAELKARG 203


>ref|XP_004141672.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449480603|ref|XP_004155942.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  318 bits (816), Expect = 9e-85
 Identities = 167/203 (82%), Positives = 178/203 (87%)
 Frame = +2

Query: 119 MGNTEKLMNQIMELKFTSKSLLRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 298
           MGNTEKL+NQIMELKFTSKSL RQAR                   GN+DGARIYAEN+IR
Sbjct: 1   MGNTEKLLNQIMELKFTSKSLQRQARKCEKEEKSEKLKIKKAMEKGNVDGARIYAENAIR 60

Query: 299 KRSEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGSIVKSLESSLTTGNLQKMSETMDQ 478
           KR+EQMNYLRL+SRLDAVVARLDTQAKMTTI+KSM SIVKSLES+L TGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMASIVKSLESTLATGNLQKMSETMDQ 120

Query: 479 FEKQFVNMEVQAEFMENSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 658
           FEKQFVNMEVQAEFMEN+MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVP 180

Query: 659 SATTEKVDEDDLSRRLAELKARG 727
           +  TEKVDEDDL+RRLAELKARG
Sbjct: 181 TKETEKVDEDDLTRRLAELKARG 203