BLASTX nr result

ID: Cimicifuga21_contig00012808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012808
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333460.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichoca...    72   4e-11
ref|XP_002869574.1| hypothetical protein ARALYDRAFT_354079 [Arab...    72   6e-11
ref|XP_002325704.1| BED finger-nbs-lrr resistance protein [Popul...    70   1e-10
ref|XP_002279972.1| PREDICTED: disease resistance protein At4g27...    70   2e-10

>ref|XP_002333460.1| predicted protein [Populus trichocarpa] gi|222836928|gb|EEE75321.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
 Frame = +2

Query: 5   NQIERL---HVPPHKETNVTTLLLHDNPXXXXXXXXXXXXXALKILDISYSWITELPPSL 175
           NQIE +   H P  K  N++TLLL  NP              LK+LD+S + IT+L  S+
Sbjct: 48  NQIEEIPSRHSP--KCPNLSTLLLCGNPLVLIADSFFEQLHGLKVLDLSSTGITKLSDSV 105

Query: 176 SELAQLRVLFLHYCRSLQKIPSLEKLKELQVLRLCGTSITELPQGMEGL 322
           SEL  L  L ++ C  L+ +PSLEKL+ L+ L L  T++ ++PQGME L
Sbjct: 106 SELVNLTALLINKCMKLRHVPSLEKLRALKRLELHYTTLEKIPQGMECL 154


>ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834654|gb|EEE73117.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 674

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/67 (53%), Positives = 50/67 (74%)
 Frame = +2

Query: 122 LKILDISYSWITELPPSLSELAQLRVLFLHYCRSLQKIPSLEKLKELQVLRLCGTSITEL 301
           LK+LD+SY+ IT+LP S+SEL  L  L L  C+ L+ +PSLEKL+ L+ L L GT++ ++
Sbjct: 491 LKVLDLSYTGITKLPDSVSELVSLTTLLLIDCKMLRHVPSLEKLRALKRLDLSGTALEKI 550

Query: 302 PQGMEGL 322
           PQGME L
Sbjct: 551 PQGMECL 557


>ref|XP_002869574.1| hypothetical protein ARALYDRAFT_354079 [Arabidopsis lyrata subsp.
           lyrata] gi|297315410|gb|EFH45833.1| hypothetical protein
           ARALYDRAFT_354079 [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/70 (55%), Positives = 51/70 (72%)
 Frame = +2

Query: 119 ALKILDISYSWITELPPSLSELAQLRVLFLHYCRSLQKIPSLEKLKELQVLRLCGTSITE 298
           AL+IL++S + I+ LP SLSEL +LR L L  C  L+++PSLEKL ++QVL LC T I E
Sbjct: 115 ALRILNLSGTRISSLPLSLSELHELRSLILRDCYYLEEVPSLEKLTKIQVLDLCATRIKE 174

Query: 299 LPQGMEGLIS 328
           LP G+E L S
Sbjct: 175 LPTGLETLNS 184


>ref|XP_002325704.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862579|gb|EEF00086.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 533

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = +2

Query: 47  NVTTLLLHDNPXXXXXXXXXXXXX-ALKILDISYSWITELPPSLSELAQLRVLFLHYCRS 223
           N++TLLL DN                LK+LD+S + I ELP S+SELA L  L L  C++
Sbjct: 331 NLSTLLLCDNERLQFIADSFFTHLHGLKVLDLSRTRIMELPDSVSELASLTALLLEKCKN 390

Query: 224 LQKIPSLEKLKELQVLRLCG-TSITELPQGMEGL 322
           L+ +PSLEKL+ L+ L L G T++ E+PQGM+ L
Sbjct: 391 LRHVPSLEKLRALKRLDLSGTTALEEIPQGMQCL 424


>ref|XP_002279972.1| PREDICTED: disease resistance protein At4g27190 [Vitis vinifera]
          Length = 989

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +2

Query: 5   NQIERLHVPPHKETNVTTLLLHDN-PXXXXXXXXXXXXXALKILDISYSWITELPPSLSE 181
           N+IERL   P   +  TTLLL  N P             AL++L++  + I  LP SL +
Sbjct: 519 NEIERLPDCPISCSEATTLLLQGNSPLERVPEGFLLGFPALRVLNLGETKIQRLPHSLLQ 578

Query: 182 LAQLRVLFLHYCRSLQKIPSLEKLKELQVLRLCGTSITELPQGMEGL 322
             +LR L L  C SL+++PSL  L+ LQVL    T + ELP+GME L
Sbjct: 579 QGELRALILRQCSSLEELPSLGGLRRLQVLDCSCTDLKELPEGMEQL 625


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