BLASTX nr result

ID: Cimicifuga21_contig00012803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012803
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related or...   191   3e-46
ref|XP_002517726.1| conserved hypothetical protein [Ricinus comm...   179   1e-42
ref|XP_002448895.1| hypothetical protein SORBIDRAFT_05g001020 [S...   176   1e-41
gb|AFW76360.1| hypothetical protein ZEAMMB73_209529 [Zea mays]        174   3e-41
gb|AFK45925.1| unknown [Lotus japonicus]                              174   3e-41

>ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1 [Vitis vinifera] gi|297745789|emb|CBI15845.3|
           unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  191 bits (485), Expect = 3e-46
 Identities = 92/121 (76%), Positives = 109/121 (90%)
 Frame = +3

Query: 543 GLESSLLQLVHDHHHLSLKLREQTEKAKKDALRSAVRVSDLLVDTVNGGVQESFLNEKRI 722
           GLE+SLLQL+ DHH  SLKLR++TEKAK DA+R+A+RVSDLLVDTVNGGVQE+F+NEKRI
Sbjct: 28  GLEASLLQLIQDHHQTSLKLRDETEKAKNDAIRTAMRVSDLLVDTVNGGVQEAFINEKRI 87

Query: 723 ELEIRSLAATVSRYSKQTDQWLVASHSINSVLKEIGDFENMMKIMDYDCRSINAAIRNIY 902
           ELE R+L ATV R++KQT QWL ASH+IN+ +KEIGDFEN MK MD+DCRSINAAIRNI+
Sbjct: 88  ELESRALTATVIRFAKQTHQWLAASHAINTAIKEIGDFENWMKTMDFDCRSINAAIRNIH 147

Query: 903 Q 905
           Q
Sbjct: 148 Q 148


>ref|XP_002517726.1| conserved hypothetical protein [Ricinus communis]
           gi|223543124|gb|EEF44658.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 148

 Score =  179 bits (454), Expect = 1e-42
 Identities = 85/120 (70%), Positives = 103/120 (85%)
 Frame = +3

Query: 546 LESSLLQLVHDHHHLSLKLREQTEKAKKDALRSAVRVSDLLVDTVNGGVQESFLNEKRIE 725
           LE SLLQL+ DHH  SL+LRE TEKAKKDA+R A +VS LL+D VNGGVQESF+NEKRIE
Sbjct: 29  LEGSLLQLIQDHHQTSLRLRENTEKAKKDAIRKAAKVSGLLMDAVNGGVQESFINEKRIE 88

Query: 726 LEIRSLAATVSRYSKQTDQWLVASHSINSVLKEIGDFENMMKIMDYDCRSINAAIRNIYQ 905
            EIR+LAATVSR+ +QTD WL A+H+IN+ +KEIGDFEN +K M++DC+SINAAIR I+Q
Sbjct: 89  FEIRALAATVSRFMRQTDHWLTATHAINTAIKEIGDFENWLKTMEFDCKSINAAIRTIHQ 148


>ref|XP_002448895.1| hypothetical protein SORBIDRAFT_05g001020 [Sorghum bicolor]
           gi|241934738|gb|EES07883.1| hypothetical protein
           SORBIDRAFT_05g001020 [Sorghum bicolor]
          Length = 137

 Score =  176 bits (446), Expect = 1e-41
 Identities = 85/121 (70%), Positives = 104/121 (85%)
 Frame = +3

Query: 546 LESSLLQLVHDHHHLSLKLREQTEKAKKDALRSAVRVSDLLVDTVNGGVQESFLNEKRIE 725
           LE +LLQ+VH HH   L+ R+QTE+AK+ ALRSA RV+DLLVD V+GGVQE F+NEKRIE
Sbjct: 17  LEEALLQIVHQHHRQFLRQRQQTERAKEGALRSAARVADLLVDAVDGGVQELFVNEKRIE 76

Query: 726 LEIRSLAATVSRYSKQTDQWLVASHSINSVLKEIGDFENMMKIMDYDCRSINAAIRNIYQ 905
           LE R+L  T++RY +QTDQWL A++ INSVLKEIGDFEN MKIMD+DC+SINAAIRNI+Q
Sbjct: 77  LEARALLGTIARYRRQTDQWLAATNEINSVLKEIGDFENWMKIMDFDCKSINAAIRNIHQ 136

Query: 906 A 908
           +
Sbjct: 137 S 137


>gb|AFW76360.1| hypothetical protein ZEAMMB73_209529 [Zea mays]
          Length = 134

 Score =  174 bits (442), Expect = 3e-41
 Identities = 84/123 (68%), Positives = 105/123 (85%)
 Frame = +3

Query: 540 EGLESSLLQLVHDHHHLSLKLREQTEKAKKDALRSAVRVSDLLVDTVNGGVQESFLNEKR 719
           + LE +LL++V  HHH SL  R+QTE+AKKDAL+SAVRV+DLLVDTV+GGV+E F+NEKR
Sbjct: 12  QDLEEALLRIVQQHHHQSLCQRQQTERAKKDALKSAVRVADLLVDTVDGGVRELFVNEKR 71

Query: 720 IELEIRSLAATVSRYSKQTDQWLVASHSINSVLKEIGDFENMMKIMDYDCRSINAAIRNI 899
           IELE R+L  T++RY +QTD+WL A+  INS LKEIGD EN MKIMD+DC+SINAAIRNI
Sbjct: 72  IELEARALLGTIARYRRQTDEWLAATSEINSALKEIGDIENWMKIMDFDCKSINAAIRNI 131

Query: 900 YQA 908
           +Q+
Sbjct: 132 HQS 134


>gb|AFK45925.1| unknown [Lotus japonicus]
          Length = 200

 Score =  174 bits (442), Expect = 3e-41
 Identities = 88/137 (64%), Positives = 109/137 (79%), Gaps = 1/137 (0%)
 Frame = +3

Query: 498 SNPETKMPT-MTSVAEGLESSLLQLVHDHHHLSLKLREQTEKAKKDALRSAVRVSDLLVD 674
           SNP  K    +T+  +GLE+SL  L+  HHH SL L   TEKAKKDA+R A RVSDLLV+
Sbjct: 63  SNPMEKNDVGITTEPKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVE 122

Query: 675 TVNGGVQESFLNEKRIELEIRSLAATVSRYSKQTDQWLVASHSINSVLKEIGDFENMMKI 854
            VNGGVQ+SF+N+KRIE EIR+LA T++R+ KQTDQWL A+HS+N+ LKEIGDFEN MKI
Sbjct: 123 AVNGGVQDSFVNQKRIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKI 182

Query: 855 MDYDCRSINAAIRNIYQ 905
           M+YDC+SI  AI+NI+Q
Sbjct: 183 MEYDCKSITTAIQNIHQ 199


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