BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012795
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group]     62   5e-08
gb|AAP52162.2| retrotransposon protein, putative, Ty3-gypsy subc...    62   5e-08
gb|AAM14672.1|AC097446_1 Putative polyprotein [Oryza sativa Japo...    62   5e-08
emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]            61   1e-07
gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subc...    61   1e-07

>gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1729

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +2

Query: 32   EEFGYRDRPFGIVDTNVKKTRRSAIRLVKVQWSN-DEKDVTWETEDKIMKKYPYLFA 199
            E+  Y ++P  I++TN +KTR   IR  KVQWSN  E++ TWE ED++   +PYLFA
Sbjct: 1662 EDLTYVEKPIRILETNERKTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFA 1718


>gb|AAP52162.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1730

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +2

Query: 32   EEFGYRDRPFGIVDTNVKKTRRSAIRLVKVQWSN-DEKDVTWETEDKIMKKYPYLFA 199
            E+  Y ++P  I++TN +KTR   IR  KVQWSN  E++ TWE ED++   +PYLFA
Sbjct: 1663 EDLTYVEKPIRILETNERKTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFA 1719


>gb|AAM14672.1|AC097446_1 Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1342

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +2

Query: 32   EEFGYRDRPFGIVDTNVKKTRRSAIRLVKVQWSN-DEKDVTWETEDKIMKKYPYLFA 199
            E+  Y ++P  I++TN +KTR   IR  KVQWSN  E++ TWE ED++   +PYLFA
Sbjct: 1275 EDLTYVEKPIRILETNERKTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFA 1331


>emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]
          Length = 1670

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +2

Query: 32   EEFGYRDRPFGIVDTNVKKTRRSAIRLVKVQWSN-DEKDVTWETEDKIMKKYPYLFA 199
            E+  Y ++P  I++TN ++TR   IR  KVQWSN  E++ TWE ED++   +PYLFA
Sbjct: 1603 EDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFA 1659


>gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1695

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +2

Query: 32   EEFGYRDRPFGIVDTNVKKTRRSAIRLVKVQWSN-DEKDVTWETEDKIMKKYPYLFA 199
            E+  Y ++P  I++TN ++TR   IR  KVQWSN  E++ TWE ED++   +PYLFA
Sbjct: 1628 EDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFA 1684