BLASTX nr result
ID: Cimicifuga21_contig00012791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012791
(1857 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 474 e-131
emb|CBI36964.3| unnamed protein product [Vitis vinifera] 449 e-123
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2... 448 e-123
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi... 442 e-121
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,... 438 e-120
>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 474 bits (1221), Expect = e-131
Identities = 257/492 (52%), Positives = 320/492 (65%), Gaps = 13/492 (2%)
Frame = -2
Query: 1655 MKKAISRCAIGSVGGRRSVCTTLAAIEEREATPTP---------LYRRXXXXXXXXXXXS 1503
M + +R G R +CT AA E E LY R
Sbjct: 2 MARNPNRLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGS-- 59
Query: 1502 VTKTVNAYMREGRFISKLELQSCVKQLRKYKRFQHALELMEWMEKKGTNLSYKDYAVRVD 1323
V T+N +++EG+ I+K EL SC+KQLRKY++FQHALE+M+WME + SY DYAVR+D
Sbjct: 60 VADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLD 119
Query: 1322 LVSKTKGIDSTEHYFDSLPAPAKNRFTYGALLNCYCKNMMTEKALTLFEKMSELNFTST- 1146
L+SKTKG+ + E YF++L AKN TYG LLNCYCK M EKAL LFEKM ELNF ST
Sbjct: 120 LLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTS 179
Query: 1145 LAYNNLMSLYMRLGEPEKVPLLVQKMKEKDISPDTFTYNVLMNSHASLNDIEGVERVAKE 966
L +NNLMSL+MRLG+PE VP LV +MK++ ISPDTFTYN+LM S+A LNDIEG ERV +E
Sbjct: 180 LTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEE 239
Query: 965 IET---DRCDWTTYSNLAAIYVEVGXXXXXXXXXXXXXXXINIKPRDCDRTAYHFLISLY 795
I+ D+ WTTYSNLAA+YV + DR AYHFLISLY
Sbjct: 240 IKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFH----DRLAYHFLISLY 295
Query: 794 AGTSNLLEVYRVWNSLKSAFSKTTNLSYLAMLQSLSKLNDFDGLEKCFKEWESSCPSYDM 615
AG +NL EV RVWNSLKSAF KT N+SY MLQ+L+ LND DGL+ CF+EW+SSC S+D+
Sbjct: 296 AGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDV 355
Query: 614 RLANIVVSAYLRRDMAKEAGLICEDAIKRGSGPDFRTQELFMDFFMRNNQWDLALSCMER 435
RLAN+ V A+L DM K+A I +A+KR SGP + ++FM ++ + D AL ME
Sbjct: 356 RLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEA 415
Query: 434 TIAIVKKNEWKPRWERISAFLKHVEEEKNVAGAEELCKMLNKIDCLDSQAYRLLLSIYVA 255
+ VK NEW+P ER+ AFLK+ EEEK+V GAE+ CK+L I LDS AY+LLL VA
Sbjct: 416 AASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISGLDSNAYQLLLQTXVA 475
Query: 254 ANEKNPGMRSRL 219
A P MR R+
Sbjct: 476 AGRTEPEMRKRM 487
>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 449 bits (1155), Expect = e-123
Identities = 242/463 (52%), Positives = 303/463 (65%), Gaps = 13/463 (2%)
Frame = -2
Query: 1655 MKKAISRCAIGSVGGRRSVCTTLAAIEEREATPTP---------LYRRXXXXXXXXXXXS 1503
M + +R G R +CT AA E E LY R
Sbjct: 41 MARNPNRLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGS-- 98
Query: 1502 VTKTVNAYMREGRFISKLELQSCVKQLRKYKRFQHALELMEWMEKKGTNLSYKDYAVRVD 1323
V T+N +++EG+ I+K EL SC+KQLRKY++FQHALE+M+WME + SY DYAVR+D
Sbjct: 99 VADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLD 158
Query: 1322 LVSKTKGIDSTEHYFDSLPAPAKNRFTYGALLNCYCKNMMTEKALTLFEKMSELNFTST- 1146
L+SKTKG+ + E YF++L AKN TYG LLNCYCK M EKAL LFEKM ELNF ST
Sbjct: 159 LLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTS 218
Query: 1145 LAYNNLMSLYMRLGEPEKVPLLVQKMKEKDISPDTFTYNVLMNSHASLNDIEGVERVAKE 966
L +NNLMSL+MRLG+PE VP LV +MK++ ISPDTFTYN+LM S+A LNDIEG ERV +E
Sbjct: 219 LTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEE 278
Query: 965 IET---DRCDWTTYSNLAAIYVEVGXXXXXXXXXXXXXXXINIKPRDCDRTAYHFLISLY 795
I+ D+ WTTYSNLAA+YV + DR AYHFLISLY
Sbjct: 279 IKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFH----DRLAYHFLISLY 334
Query: 794 AGTSNLLEVYRVWNSLKSAFSKTTNLSYLAMLQSLSKLNDFDGLEKCFKEWESSCPSYDM 615
AG +NL EV RVWNSLKSAF KT N+SY MLQ+L+ LND DGL+ CF+EW+SSC S+D+
Sbjct: 335 AGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDV 394
Query: 614 RLANIVVSAYLRRDMAKEAGLICEDAIKRGSGPDFRTQELFMDFFMRNNQWDLALSCMER 435
RLAN+ V A+L DM K+A I +A+KR SGP + ++FM ++ + D AL ME
Sbjct: 395 RLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEA 454
Query: 434 TIAIVKKNEWKPRWERISAFLKHVEEEKNVAGAEELCKMLNKI 306
+ VK NEW+P ER+ AFLK+ EEEK+V GAE+ CK+L I
Sbjct: 455 AASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNI 497
>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
predicted protein [Populus trichocarpa]
Length = 476
Score = 448 bits (1153), Expect = e-123
Identities = 232/441 (52%), Positives = 305/441 (69%), Gaps = 13/441 (2%)
Frame = -2
Query: 1502 VTKTVNAYMREGRFISKLELQSCVKQLRKYKRFQHALELMEWMEKKGTNLSYKDYAVRVD 1323
V+KT+N + EG SK+ L +C+K+LRKY RF HA+E+MEWM+K+ N S+ D+AV +D
Sbjct: 15 VSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKRKMNFSHVDHAVYLD 74
Query: 1322 LVSKTKGIDSTEHYFDSLPAPAKNRFTYGALLNCYCKNMMTEKALTLFEKMSELNFTST- 1146
L +KTKGI + E+YFD+LP +N TY LLNCYCK +M+EKALTLFEKM ++ ST
Sbjct: 75 LTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALTLFEKMDKMKLLSTS 134
Query: 1145 LAYNNLMSLYMRLGEPEKVPLLVQKMKEKDISPDTFTYNVLMNSHASLNDIEGVERVAKE 966
+ +NNLM+L+MRLG+PEKV +VQ+MK++ +SP TFTYN+ M S+ LND EGV+RV E
Sbjct: 135 MPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYGCLNDFEGVQRVLDE 194
Query: 965 IETD---RCDWTTYSNLAAIYVEVGXXXXXXXXXXXXXXXINI---------KPRDCDRT 822
++TD WTTYSNLA IYV+ G I + D DR
Sbjct: 195 MKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRDCDFQKKRRHDADRE 254
Query: 821 AYHFLISLYAGTSNLLEVYRVWNSLKSAFSKTTNLSYLAMLQSLSKLNDFDGLEKCFKEW 642
AYHFLISLYAGTSNL EV+RVWNSLKS+F TTN+SYL +LQ+L+KL D +G+ KCFKEW
Sbjct: 255 AYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGILKCFKEW 314
Query: 641 ESSCPSYDMRLANIVVSAYLRRDMAKEAGLICEDAIKRGSGPDFRTQELFMDFFMRNNQW 462
ESSC SYDM LAN+ + A L DM +EA I ++A+KR G F+ +E+FM FF++N+Q
Sbjct: 315 ESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNHQP 374
Query: 461 DLALSCMERTIAIVKKNEWKPRWERISAFLKHVEEEKNVAGAEELCKMLNKIDCLDSQAY 282
DLAL M+ + K+ EW+P + +SAFL + E+ K+V GAE LCK+ +I+ L+S AY
Sbjct: 375 DLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAERLCKIWKQINRLNSNAY 434
Query: 281 RLLLSIYVAANEKNPGMRSRL 219
LLL Y AA P MR RL
Sbjct: 435 ILLLKTYTAAGRLAPEMRQRL 455
>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 442 bits (1136), Expect = e-121
Identities = 216/431 (50%), Positives = 296/431 (68%), Gaps = 3/431 (0%)
Frame = -2
Query: 1502 VTKTVNAYMREGRFISKLELQSCVKQLRKYKRFQHALELMEWMEKKGTNLSYKDYAVRVD 1323
V KT+N ++ EG + K EL+ C+K+LRKY+R+ H L++MEWME + N S+ DYA+R+D
Sbjct: 25 VAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETRKINYSFTDYALRLD 84
Query: 1322 LVSKTKGIDSTEHYFDSLPAPAKNRFTYGALLNCYCKNMMTEKALTLFEKMSELNFTSTL 1143
L+SK G+ + E YF LP AKNR TYGALLNCYCK MM EKALTLF+KM EL +++L
Sbjct: 85 LISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALTLFKKMDELKISTSL 144
Query: 1142 AYNNLMSLYMRLGEPEKVPLLVQKMKEKDISPDTFTYNVLMNSHASLNDIEGVERVAKEI 963
++NNLM++YMR+ PEKVP L+ +MK++ TFTYNV MNS ASLNDI VE + +E+
Sbjct: 145 SFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKVEEILEEM 204
Query: 962 ---ETDRCDWTTYSNLAAIYVEVGXXXXXXXXXXXXXXXINIKPRDCDRTAYHFLISLYA 792
+ ++ DWTTYSNLA+ YV+ G +K DR YH LISLYA
Sbjct: 205 KMEDRNKFDWTTYSNLASFYVKAG--QFEKAELALKKLEEEMKSDKNDRLVYHCLISLYA 262
Query: 791 GTSNLLEVYRVWNSLKSAFSKTTNLSYLAMLQSLSKLNDFDGLEKCFKEWESSCPSYDMR 612
TSNL EV R+WN+LKS +S TN+SYL MLQ+L KL D +GL++ +KEWES+C ++D+R
Sbjct: 263 STSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWESNCRNFDLR 322
Query: 611 LANIVVSAYLRRDMAKEAGLICEDAIKRGSGPDFRTQELFMDFFMRNNQWDLALSCMERT 432
+ N ++ AYL++DM ++A +I EDA KR GP R +E+FM +F++ Q D A S +E
Sbjct: 323 IVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLKQVDSAFSHLESA 382
Query: 431 IAIVKKNEWKPRWERISAFLKHVEEEKNVAGAEELCKMLNKIDCLDSQAYRLLLSIYVAA 252
++ K+ EW P +AFL + EEEK+V GAE+ ++L ++ CLD+ Y LLL YVAA
Sbjct: 383 LSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLDASGYHLLLKTYVAA 442
Query: 251 NEKNPGMRSRL 219
+ P MR RL
Sbjct: 443 GKLAPDMRKRL 453
>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 438 bits (1126), Expect = e-120
Identities = 219/434 (50%), Positives = 299/434 (68%), Gaps = 6/434 (1%)
Frame = -2
Query: 1502 VTKTVNAYMREGRFISKLELQSCVKQLRKYKRFQHALELMEWMEKKGTNLSYKDYAVRVD 1323
V++T+N ++ EG+ I+K+EL C+++LRKY+RF HA E+MEWMEK+ N SY D A+R+D
Sbjct: 54 VSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKRKMNFSYADRAIRLD 113
Query: 1322 LVSKTKGIDSTEHYFDSLPAPAKNRFT-YGALLNCYCKNMMTEKALTLFEKMSELNFT-S 1149
L+ K +GI + E YF+ L AKN T YGALLNCYCK +M++KAL LF++M E F S
Sbjct: 114 LIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFLYS 173
Query: 1148 TLAYNNLMSLYMRLGEPEKVPLLVQKMKEKDISPDTFTYNVLMNSHASLNDIEGVERVAK 969
+L +NNLMS+YMRLG+PEKVP LV +MK++ +SP +FTYN+ M S+ LND +GV+RV +
Sbjct: 174 SLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRVLR 233
Query: 968 EIETD----RCDWTTYSNLAAIYVEVGXXXXXXXXXXXXXXXINIKPRDCDRTAYHFLIS 801
EI D WTTYSNLA IY++ G + + R+ AYHFLIS
Sbjct: 234 EIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMGFRNRE----AYHFLIS 289
Query: 800 LYAGTSNLLEVYRVWNSLKSAFSKTTNLSYLAMLQSLSKLNDFDGLEKCFKEWESSCPSY 621
+YAGT N EV RVW LKS+F+ NLSYL MLQ+L+KL D +G+ KCF+EWES C +Y
Sbjct: 290 IYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNY 349
Query: 620 DMRLANIVVSAYLRRDMAKEAGLICEDAIKRGSGPDFRTQELFMDFFMRNNQWDLALSCM 441
DMR+AN+ + +L+ DM +EA LI +DA+KR GP F+ +E FM FF++ +Q DLAL M
Sbjct: 350 DMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFLKIHQLDLALKHM 409
Query: 440 ERTIAIVKKNEWKPRWERISAFLKHVEEEKNVAGAEELCKMLNKIDCLDSQAYRLLLSIY 261
+ +K+EWKP E ++A+ + EK+V GAE+L K+L I+CL+S Y LLL Y
Sbjct: 410 RAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCLNSSVYSLLLKTY 469
Query: 260 VAANEKNPGMRSRL 219
+AA + P MR RL
Sbjct: 470 IAAGKLAPEMRQRL 483