BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012763
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   290   4e-76
ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   289   9e-76
ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   286   8e-75
gb|AFK35048.1| unknown [Lotus japonicus]                              285   2e-74
ref|XP_003610450.1| 5'-tyrosyl-DNA phosphodiesterase [Medicago t...   279   1e-72

>ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine
            max]
          Length = 402

 Score =  290 bits (743), Expect = 4e-76
 Identities = 142/278 (51%), Positives = 192/278 (69%), Gaps = 8/278 (2%)
 Frame = +1

Query: 262  IEPGSTLKILTYNVCSRKDYYETNERMKAIGALVEHYSPHFICFQEFTPEIYNMFRESSW 441
            I+ G   KIL+YNV  R+D  E ++RMKAIG LV+ +SP FICFQE TP IY++F+ S+W
Sbjct: 128  IDTGKAFKILSYNVWFREDL-ELHKRMKAIGDLVQLHSPDFICFQEVTPNIYDIFKGSAW 186

Query: 442  WGDYHCSMSDEEASRKQYFCILLSKFPPVETIKAPLGTSKMGRELCVTKTKVGNYKSLVV 621
            W  Y CS+S E A  + YFC+LLSK P       P   S MGRELC+ + +  + K LV+
Sbjct: 187  WSVYCCSVSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVI 246

Query: 622  ATSHLKSPCPDPKDPNSQNHQFKRERLLQAKEALAILKKYPNVIFCGDMNWNEKTDGQFP 801
            ATSHL+SPCP P      +  + +ER++QA EA+ +LKK P+V+F GDMNWN++ DGQ+P
Sbjct: 247  ATSHLESPCPAPP---KWDQMYSKERVVQANEAINLLKKQPSVVFGGDMNWNDQQDGQYP 303

Query: 802  LPYGWVDAWTELKSEEKGYTFDTKLNEMLKNHPYLRMRLDRIVCNLTGFRLDDIDIIGKE 981
            L  GWVDAW++L+  E G+T+DTK N+ML  +  L+ RLDR +C  T F++  +D+IG E
Sbjct: 304  LQDGWVDAWSQLRPNESGWTYDTKSNQMLTGNRTLQKRLDRFICQFTDFKITSVDMIGME 363

Query: 982  AIPDVTHQRYKK--------LLPVLPSDHFGLLLTICS 1071
            AIP V++ + KK        +LPVLPSDH+GLLLTI S
Sbjct: 364  AIPGVSYNKEKKVRKEIKQLVLPVLPSDHYGLLLTISS 401


>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  289 bits (740), Expect = 9e-76
 Identities = 149/280 (53%), Positives = 192/280 (68%), Gaps = 8/280 (2%)
 Frame = +1

Query: 250  TNSYIEPGSTLKILTYNVCSRKDYYETNERMKAIGALVEHYSPHFICFQEFTPEIYNMFR 429
            TNS    GS  KIL+YNV  R+D  E + RMKA+G L++ +SP  IC QE  P+IY++F+
Sbjct: 145  TNSAAVLGS-FKILSYNVWFREDL-EMHRRMKALGELIQLHSPDVICLQEVIPDIYDIFQ 202

Query: 430  ESSWWGDYHCSMSDEEASRKQYFCILLSKFPPVETIKAPLGTSKMGRELCVTKTKVGNYK 609
             SSWW  Y CS+S E AS + YFC+ LSK P       P   S MGRELC+ + +V   K
Sbjct: 203  RSSWWKAYQCSVSSEIASSRGYFCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKK 262

Query: 610  SLVVATSHLKSPCPDPKDPNSQNHQFKRERLLQAKEALAILKKYPNVIFCGDMNWNEKTD 789
            SLVVATSHL+SPCP P      +  F +ER+ QAKEA+ +LKK  NVIFCGDMNW++K D
Sbjct: 263  SLVVATSHLESPCPAPP---KWDQMFSKERVDQAKEAINLLKKNSNVIFCGDMNWDDKLD 319

Query: 790  GQFPLPYGWVDAWTELKSEEKGYTFDTKLNEMLKNHPYLRMRLDRIVCNLTGFRLDDIDI 969
            GQFP P GWVDAW ELK  + G+T+DTK N+ML  +  L+ RLDR +C+L  F++  ID+
Sbjct: 320  GQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSGNRALQKRLDRFICSLCDFKISKIDM 379

Query: 970  IGKEAIPDVTHQRYKKL--------LPVLPSDHFGLLLTI 1065
            IGK+AIP +++ + KK+        LPVLPSDH+GLLLTI
Sbjct: 380  IGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYGLLLTI 419


>ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine
            max]
          Length = 401

 Score =  286 bits (732), Expect = 8e-75
 Identities = 140/271 (51%), Positives = 189/271 (69%), Gaps = 8/271 (2%)
 Frame = +1

Query: 283  KILTYNVCSRKDYYETNERMKAIGALVEHYSPHFICFQEFTPEIYNMFRESSWWGDYHCS 462
            KIL+YNV  R+D  E ++RMKAIG LV+ +SP FICFQE TP IY++F+ S+WW  Y CS
Sbjct: 134  KILSYNVWFREDL-ELHKRMKAIGDLVQLHSPDFICFQEVTPNIYDIFKGSAWWSVYCCS 192

Query: 463  MSDEEASRKQYFCILLSKFPPVETIKAPLGTSKMGRELCVTKTKVGNYKSLVVATSHLKS 642
            +S E A  + YFC+LLSK P       P   S MGRELC+ + +  + K LV+ATSHL+S
Sbjct: 193  VSSEMAYSRPYFCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVIATSHLES 252

Query: 643  PCPDPKDPNSQNHQFKRERLLQAKEALAILKKYPNVIFCGDMNWNEKTDGQFPLPYGWVD 822
            PCP P      +  + +ER++QA EA+ +LKK P+V+F GDMNWN++ DGQ+PL  GWVD
Sbjct: 253  PCPAPP---KWDQMYSKERVVQANEAINLLKKQPSVVFGGDMNWNDQQDGQYPLQDGWVD 309

Query: 823  AWTELKSEEKGYTFDTKLNEMLKNHPYLRMRLDRIVCNLTGFRLDDIDIIGKEAIPDVTH 1002
            AW++L+  E G+T+DTK N+ML  +  L+ RLDR +C  T F++  +D+IG EAIP V++
Sbjct: 310  AWSQLRPNESGWTYDTKSNQMLTGNRTLQKRLDRFICQFTDFKITSVDMIGMEAIPGVSY 369

Query: 1003 QRYKK--------LLPVLPSDHFGLLLTICS 1071
             + KK        +LPVLPSDH+GLLLTI S
Sbjct: 370  NKEKKVRKEIKQLVLPVLPSDHYGLLLTISS 400


>gb|AFK35048.1| unknown [Lotus japonicus]
          Length = 467

 Score =  285 bits (729), Expect = 2e-74
 Identities = 139/286 (48%), Positives = 198/286 (69%), Gaps = 8/286 (2%)
 Frame = +1

Query: 238  NLSITNSYIEPGSTLKILTYNVCSRKDYYETNERMKAIGALVEHYSPHFICFQEFTPEIY 417
            ++ I +S  + G++LKIL+YNV  R+D  E  +RMKAIG LV  +SP  ICFQE TP IY
Sbjct: 185  SMKILSSGKDVGTSLKILSYNVWFREDL-EPQKRMKAIGDLVHLHSPDLICFQEVTPNIY 243

Query: 418  NMFRESSWWGDYHCSMSDEEASRKQYFCILLSKFPPVETIKAPLGTSKMGRELCVTKTKV 597
            ++F++S+WW  Y CS+S ++A  + YFC+LLSK P           S MGRELC+ + + 
Sbjct: 244  DIFKKSTWWSVYQCSVSADKAYSRPYFCMLLSKLPVKSFSNKSFSNSIMGRELCIAEVEA 303

Query: 598  GNYKSLVVATSHLKSPCPDPKDPNSQNHQFKRERLLQAKEALAILKKYPNVIFCGDMNWN 777
             N KSLV+ATSHL+SPCP P      +  + +ER+ QA EA+ +LKK+PNV+F GDMNW+
Sbjct: 304  ANGKSLVIATSHLESPCPGPP---KWDQMYSKERVEQANEAVNLLKKHPNVVFGGDMNWD 360

Query: 778  EKTDGQFPLPYGWVDAWTELKSEEKGYTFDTKLNEMLKNHPYLRMRLDRIVCNLTGFRLD 957
            +K DGQ+P   GW+DAW++L+ ++ G+T+DTK N+ML  +  L+ RLDR +C L+  ++ 
Sbjct: 361  DKLDGQYPSQDGWIDAWSQLRPDQSGWTYDTKSNQMLSGNRTLQKRLDRFICRLSDLKIS 420

Query: 958  DIDIIGKEAIPDVTHQRYKK--------LLPVLPSDHFGLLLTICS 1071
             ID+IG +AIP +++ + KK        +LPVLPSDH+GLLLTI S
Sbjct: 421  SIDMIGMDAIPGLSYIKEKKVRKETKQLVLPVLPSDHYGLLLTITS 466


>ref|XP_003610450.1| 5'-tyrosyl-DNA phosphodiesterase [Medicago truncatula]
            gi|355511505|gb|AES92647.1| 5'-tyrosyl-DNA
            phosphodiesterase [Medicago truncatula]
          Length = 437

 Score =  279 bits (714), Expect = 1e-72
 Identities = 142/274 (51%), Positives = 188/274 (68%), Gaps = 8/274 (2%)
 Frame = +1

Query: 274  STLKILTYNVCSRKDYYETNERMKAIGALVEHYSPHFICFQEFTPEIYNMFRESSWWGDY 453
            S+LKIL+YNV  R+D  E  +RMKAIG LV  +SP FICFQE T +IY++F+ S+WW  Y
Sbjct: 167  SSLKILSYNVWFREDL-ELEKRMKAIGDLVLMHSPDFICFQEVTRDIYDIFKLSTWWNVY 225

Query: 454  HCSMSDEEASRKQYFCILLSKFPPVETIKAPLGTSKMGRELCVTKTKVGNYKSLVVATSH 633
            HCS+S E+A  K Y+C+LLSK P           S MGRELC+ + +    KS VVATSH
Sbjct: 226  HCSVSSEKAYSKAYYCMLLSKLPVKSFSAKSFSNSIMGRELCIAEVEDVGGKSFVVATSH 285

Query: 634  LKSPCPDPKDPNSQNHQFKRERLLQAKEALAILKKYPNVIFCGDMNWNEKTDGQFPLPYG 813
            L+SPCP P      +  F +ER+ QA EAL ILK++PNV+F GDMNW++K DGQ+PL  G
Sbjct: 286  LESPCPAPP---KWDQMFSKERVEQANEALNILKRHPNVVFGGDMNWDDKKDGQYPLQDG 342

Query: 814  WVDAWTELKSEEKGYTFDTKLNEMLKNHPYLRMRLDRIVCNLTGFRLDDIDIIGKEAIPD 993
            W+DAW+ L+  E G+T+DTK N+ML  +  L+ RLDR VC L  F++ +ID+IG + IP 
Sbjct: 343  WLDAWSVLRPNEAGWTYDTKSNQMLTGNRTLQKRLDRFVCRLRDFKISNIDMIGMDEIPG 402

Query: 994  VTHQRYKK--------LLPVLPSDHFGLLLTICS 1071
            V++ + KK        + PVLPSDH+GLLLT+ S
Sbjct: 403  VSYNKEKKVRGEIKQLVCPVLPSDHYGLLLTLSS 436