BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012760
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   240   1e-61
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   236   2e-60
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   232   2e-59
dbj|BAF45348.1| nucleoporin [Lotus japonicus]                         224   7e-57
ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago...   217   7e-55

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
           gi|296081842|emb|CBI20847.3| unnamed protein product
           [Vitis vinifera]
          Length = 715

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/158 (72%), Positives = 133/158 (84%)
 Frame = +2

Query: 2   IAKLECSTFWVKCDHRQTREGLKNLLQIMLGNTNILSSVTCHWMELYISNFLYIRPFTMG 181
           I KL+CS+FWV+CDHRQTREGL+N+LQ+MLGNTN L + TCHW+ELYIS+FLY+RPFT+G
Sbjct: 317 ITKLDCSSFWVQCDHRQTREGLRNMLQLMLGNTNNLCTSTCHWIELYISHFLYVRPFTVG 376

Query: 182 LEGMYSLAQKCLQLKPLSNRHSLMXXXXXXXXXXXXAVLAECSRAFGPWMVAHAIELLTA 361
           LE M++LAQKC+QLKP+S+ H LM             VLAECSRAFGPWMVAHAIELLTA
Sbjct: 377 LESMHALAQKCIQLKPISSSHRLMGLIVGILGENTEVVLAECSRAFGPWMVAHAIELLTA 436

Query: 362 GNTQAEILLNEERYNLGGISMEELHRLIYAQVLSSHTL 475
           G+ QAEI+L E R NLGGIS+EELHRLIYAQVLSSH L
Sbjct: 437 GSDQAEIILQEGRDNLGGISIEELHRLIYAQVLSSHAL 474


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
           gi|223544326|gb|EEF45847.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score =  236 bits (601), Expect = 2e-60
 Identities = 112/158 (70%), Positives = 131/158 (82%)
 Frame = +2

Query: 2   IAKLECSTFWVKCDHRQTREGLKNLLQIMLGNTNILSSVTCHWMELYISNFLYIRPFTMG 181
           + KLE S FWV+CDHR+TREGLKN+LQIMLGNTNILS++TC+W+E+YIS+ LYIRPFT+G
Sbjct: 326 VTKLESSAFWVQCDHRRTREGLKNMLQIMLGNTNILSTMTCNWVEMYISHILYIRPFTVG 385

Query: 182 LEGMYSLAQKCLQLKPLSNRHSLMXXXXXXXXXXXXAVLAECSRAFGPWMVAHAIELLTA 361
           LE MYSLAQKC+QLKP S+ H LM             +LAECSR FGPWMV HAIELLTA
Sbjct: 386 LESMYSLAQKCIQLKPTSSPHKLMQLILGILGENTEVILAECSRGFGPWMVTHAIELLTA 445

Query: 362 GNTQAEILLNEERYNLGGISMEELHRLIYAQVLSSHTL 475
           G+ QAE+LLNEER NLGGIS+ ELH+L+YAQVLSSH L
Sbjct: 446 GSVQAEMLLNEERDNLGGISIGELHQLVYAQVLSSHIL 483


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  232 bits (592), Expect = 2e-59
 Identities = 110/158 (69%), Positives = 129/158 (81%)
 Frame = +2

Query: 2   IAKLECSTFWVKCDHRQTREGLKNLLQIMLGNTNILSSVTCHWMELYISNFLYIRPFTMG 181
           I KL+CS FW++CD++QTREGL+NLLQIMLGNT  L   TC+W+ELYIS+FLYIRPFTMG
Sbjct: 300 ITKLDCSRFWIQCDNQQTREGLRNLLQIMLGNTESLCMATCYWIELYISHFLYIRPFTMG 359

Query: 182 LEGMYSLAQKCLQLKPLSNRHSLMXXXXXXXXXXXXAVLAECSRAFGPWMVAHAIELLTA 361
           +E MY+LAQKC+QLKP S+ H L              VLAECSR FGPW+VAHAIELLTA
Sbjct: 360 IESMYNLAQKCIQLKPRSSTHRLSVLMIGILEENTEVVLAECSREFGPWLVAHAIELLTA 419

Query: 362 GNTQAEILLNEERYNLGGISMEELHRLIYAQVLSSHTL 475
           G+ QAEILL+EERYNLGGIS+ ELHRL+YAQ+LSSH L
Sbjct: 420 GSEQAEILLHEERYNLGGISIVELHRLVYAQILSSHAL 457


>dbj|BAF45348.1| nucleoporin [Lotus japonicus]
          Length = 711

 Score =  224 bits (570), Expect = 7e-57
 Identities = 105/158 (66%), Positives = 126/158 (79%)
 Frame = +2

Query: 2   IAKLECSTFWVKCDHRQTREGLKNLLQIMLGNTNILSSVTCHWMELYISNFLYIRPFTMG 181
           I KL+CS FW++CD++QT +GL+NLLQIMLGNT  L + TCHW+ELY+S+FLYIRPFT G
Sbjct: 313 ITKLDCSPFWIQCDNQQTCDGLRNLLQIMLGNTESLCTATCHWIELYVSHFLYIRPFTTG 372

Query: 182 LEGMYSLAQKCLQLKPLSNRHSLMXXXXXXXXXXXXAVLAECSRAFGPWMVAHAIELLTA 361
           +E MY+LAQKC+QLKP S+ H L              VLAECSR FGPWMVAHA+ELLTA
Sbjct: 373 IESMYNLAQKCMQLKPPSSIHKLTGLMIGILGENTEVVLAECSREFGPWMVAHAVELLTA 432

Query: 362 GNTQAEILLNEERYNLGGISMEELHRLIYAQVLSSHTL 475
           G+ QAE+LL++E YNLGGIS+ ELHRL YAQVLSSH L
Sbjct: 433 GSEQAEVLLHDEHYNLGGISIVELHRLAYAQVLSSHAL 470


>ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago truncatula]
           gi|355477434|gb|AES58637.1| Nuclear pore complex protein
           Nup85 [Medicago truncatula]
          Length = 919

 Score =  217 bits (553), Expect = 7e-55
 Identities = 104/158 (65%), Positives = 124/158 (78%)
 Frame = +2

Query: 2   IAKLECSTFWVKCDHRQTREGLKNLLQIMLGNTNILSSVTCHWMELYISNFLYIRPFTMG 181
           I KL+CS FW++CD++QTR GL+NLLQ+MLGNT  L + +C+W+ELYIS+FLYIRPF +G
Sbjct: 349 ITKLDCSPFWIQCDNQQTRVGLRNLLQVMLGNTESLCTASCYWVELYISHFLYIRPFMIG 408

Query: 182 LEGMYSLAQKCLQLKPLSNRHSLMXXXXXXXXXXXXAVLAECSRAFGPWMVAHAIELLTA 361
           +E MY+LAQKC+QLKP +  H L              VLAE SR FGPWMVAHA+ELLTA
Sbjct: 409 VESMYNLAQKCIQLKPPTGTHRLTGLLIGILGENTEVVLAEISREFGPWMVAHAVELLTA 468

Query: 362 GNTQAEILLNEERYNLGGISMEELHRLIYAQVLSSHTL 475
           G+ QAEILL +ERYNLGGISM ELHRL YAQVLSSH L
Sbjct: 469 GSEQAEILLYDERYNLGGISMVELHRLAYAQVLSSHAL 506