BLASTX nr result

ID: Cimicifuga21_contig00012756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012756
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147755.1| PREDICTED: probable LRR receptor-like serine...   166   3e-39
ref|XP_002285391.1| PREDICTED: probable leucine-rich repeat rece...   166   4e-39
ref|XP_003545696.1| PREDICTED: probable LRR receptor-like serine...   165   7e-39
ref|XP_004170048.1| PREDICTED: probable LRR receptor-like serine...   162   4e-38
ref|XP_002268737.1| PREDICTED: probable LRR receptor-like serine...   160   2e-37

>ref|XP_004147755.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56140-like [Cucumis sativus]
          Length = 397

 Score =  166 bits (420), Expect = 3e-39
 Identities = 82/119 (68%), Positives = 100/119 (84%), Gaps = 2/119 (1%)
 Frame = -2

Query: 353 MTCFPFLFGRKVSSPIKRYAEVDEEVSGISNVIMYTYKELRIATEDFS--HKIGEGGFGS 180
           MTCFPFLF ++V  P +   + +E+ S + NV  YTYKEL++ATEDFS  +KIGEGGFGS
Sbjct: 1   MTCFPFLFSKRVKGPTRSSVD-EEDFSSMQNVKFYTYKELKVATEDFSLANKIGEGGFGS 59

Query: 179 VYKGKLKNGALVAIKVLSAWSKQGVREFLTELNVISDIEHENLVKLHGCCVEENHRILV 3
           VYKGKLK+G L AIKVLSA S+QG+REFLTE+NVIS IEHENLV+L+GCCV++NHRILV
Sbjct: 60  VYKGKLKDGKLAAIKVLSAESRQGLREFLTEINVISKIEHENLVQLYGCCVDDNHRILV 118


>ref|XP_002285391.1| PREDICTED: probable leucine-rich repeat receptor-like
           serine/threonine-protein kinase At3g14840 [Vitis
           vinifera] gi|302142911|emb|CBI20206.3| unnamed protein
           product [Vitis vinifera]
          Length = 385

 Score =  166 bits (419), Expect = 4e-39
 Identities = 85/119 (71%), Positives = 102/119 (85%), Gaps = 2/119 (1%)
 Frame = -2

Query: 353 MTCFPFLFGRKVSSPIKRYAEVDEEVSGISNVIMYTYKELRIATEDFS--HKIGEGGFGS 180
           MTCF F F +KV+S I R AEVD+ VSGI NV  Y+Y+ELRIAT+DFS  +KIGEGGFGS
Sbjct: 1   MTCFSFCFRKKVASSITRTAEVDDVVSGIQNVNRYSYRELRIATQDFSLANKIGEGGFGS 60

Query: 179 VYKGKLKNGALVAIKVLSAWSKQGVREFLTELNVISDIEHENLVKLHGCCVEENHRILV 3
           VYKG L++G +VAIKVLSA S+QG+REFLTEL+VIS IEHENLV+L+GCCV+E+ RILV
Sbjct: 61  VYKGTLRDGTVVAIKVLSAQSRQGLREFLTELSVISVIEHENLVELYGCCVDEDQRILV 119


>ref|XP_003545696.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56140-like [Glycine max]
          Length = 555

 Score =  165 bits (417), Expect = 7e-39
 Identities = 83/131 (63%), Positives = 106/131 (80%), Gaps = 3/131 (2%)
 Frame = -2

Query: 386 HSGSV-LLHHRLMTCFPFLFGRKVSSPIKRYAEVDEEVSGISNVIMYTYKELRIATEDFS 210
           H+G V +LH  +MTCFPF FG+K     K   ++DE +SGI NV +YTYKEL++A+++FS
Sbjct: 152 HNGRVRILHPPVMTCFPFSFGKKARFVAKHDPDIDEVLSGIQNVRIYTYKELKVASDNFS 211

Query: 209 --HKIGEGGFGSVYKGKLKNGALVAIKVLSAWSKQGVREFLTELNVISDIEHENLVKLHG 36
             +KIGEGGFGSVYKG LK+G + AIKVLSA S QGV+EF+TE+N+IS+IEHENLV+L+G
Sbjct: 212 PANKIGEGGFGSVYKGLLKDGKVAAIKVLSAESSQGVKEFVTEINMISEIEHENLVQLYG 271

Query: 35  CCVEENHRILV 3
           CCVE N RILV
Sbjct: 272 CCVEGNQRILV 282


>ref|XP_004170048.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56140-like [Cucumis sativus]
          Length = 397

 Score =  162 bits (410), Expect = 4e-38
 Identities = 80/119 (67%), Positives = 99/119 (83%), Gaps = 2/119 (1%)
 Frame = -2

Query: 353 MTCFPFLFGRKVSSPIKRYAEVDEEVSGISNVIMYTYKELRIATEDFS--HKIGEGGFGS 180
           MTCFPFLF ++   P +   + +E+ S + NV  YTYK+L++ATEDFS  +KIGEGGFGS
Sbjct: 1   MTCFPFLFSKRGKGPTRSSVD-EEDFSSMQNVKFYTYKQLKVATEDFSLANKIGEGGFGS 59

Query: 179 VYKGKLKNGALVAIKVLSAWSKQGVREFLTELNVISDIEHENLVKLHGCCVEENHRILV 3
           VYKGKLK+G L AIKVLSA S+QG+REFLTE+NVIS IEHENLV+L+GCCV++NHRILV
Sbjct: 60  VYKGKLKDGKLAAIKVLSAESRQGLREFLTEINVISKIEHENLVQLYGCCVDDNHRILV 118


>ref|XP_002268737.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430 [Vitis vinifera]
           gi|296082791|emb|CBI21796.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  160 bits (405), Expect = 2e-37
 Identities = 82/112 (73%), Positives = 95/112 (84%), Gaps = 2/112 (1%)
 Frame = -2

Query: 332 FGRKVSSPIKRYAEVDEEVSGISNVIMYTYKELRIATEDFS--HKIGEGGFGSVYKGKLK 159
           FGR+ SSP     +VDEEVSGI NV +Y YKEL+ AT+DFS  +KIGEGGFGSVYKG+LK
Sbjct: 7   FGRRASSPAGETDKVDEEVSGIHNVRLYMYKELKNATDDFSPANKIGEGGFGSVYKGRLK 66

Query: 158 NGALVAIKVLSAWSKQGVREFLTELNVISDIEHENLVKLHGCCVEENHRILV 3
           +G + AIKVL+A SKQGVREFLTE+NVIS+IEHE LVKL+GCCVE NHRILV
Sbjct: 67  DGTIAAIKVLAAESKQGVREFLTEINVISNIEHEYLVKLYGCCVEANHRILV 118


Top