BLASTX nr result

ID: Cimicifuga21_contig00012753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012753
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526891.1| serine-threonine protein kinase, plant-type,...    72   5e-11
ref|NP_566892.1| putative LRR receptor-like serine/threonine-pro...    69   5e-10
emb|CAB61983.1| receptor-kinase like protein [Arabidopsis thaliana]    69   5e-10
gb|AAL36369.1| putative receptor kinase [Arabidopsis thaliana]         69   5e-10
ref|XP_002880903.1| hypothetical protein ARALYDRAFT_901626 [Arab...    67   1e-09

>ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533790|gb|EEF35522.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 1013

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   GRLQGIRKLYLYRNQLGTKTRNDLKFITSLTNCTNLETLSIANNFLKGPLPDSISNLSVK 181
           GRL  +  + L  N LGTK  NDL+FI+ LTNCT LE L +  N LKGPLPD+I+NLS +
Sbjct: 314 GRLVNLSWIGLSGNMLGTKVGNDLRFISYLTNCTKLERLFVGGNLLKGPLPDAIANLSTQ 373

Query: 182 I--IEAQQNQING 214
           I  +    NQI G
Sbjct: 374 IRYLSLGINQIYG 386


>ref|NP_566892.1| putative LRR receptor-like serine/threonine-protein kinase
           [Arabidopsis thaliana]
           gi|264664489|sp|C0LGP4.1|Y3475_ARATH RecName:
           Full=Probable LRR receptor-like serine/threonine-protein
           kinase At3g47570; Flags: Precursor
           gi|224589592|gb|ACN59329.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332644782|gb|AEE78303.1| putative LRR receptor-like
           serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 1010

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   GRLQGIRKLYLYRNQLGTKTRNDLKFITSLTNCTNLETLSIANNFLKGPLPDSISNLSVK 181
           G +  ++ L+L+ N LG+ +  DL+F+TSLTNCT LETL I  N L G LP SI+NLS K
Sbjct: 303 GNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLPISIANLSAK 362

Query: 182 II 187
           ++
Sbjct: 363 LV 364


>emb|CAB61983.1| receptor-kinase like protein [Arabidopsis thaliana]
          Length = 988

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   GRLQGIRKLYLYRNQLGTKTRNDLKFITSLTNCTNLETLSIANNFLKGPLPDSISNLSVK 181
           G +  ++ L+L+ N LG+ +  DL+F+TSLTNCT LETL I  N L G LP SI+NLS K
Sbjct: 303 GNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLPISIANLSAK 362

Query: 182 II 187
           ++
Sbjct: 363 LV 364


>gb|AAL36369.1| putative receptor kinase [Arabidopsis thaliana]
          Length = 1010

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/62 (51%), Positives = 44/62 (70%)
 Frame = +2

Query: 2   GRLQGIRKLYLYRNQLGTKTRNDLKFITSLTNCTNLETLSIANNFLKGPLPDSISNLSVK 181
           G +  ++ L+L+ N LG+ +  DL+F+TSLTNCT LETL I  N L G LP SI+NLS K
Sbjct: 303 GNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLPISIANLSAK 362

Query: 182 II 187
           ++
Sbjct: 363 LV 364


>ref|XP_002880903.1| hypothetical protein ARALYDRAFT_901626 [Arabidopsis lyrata subsp.
           lyrata] gi|297326742|gb|EFH57162.1| hypothetical protein
           ARALYDRAFT_901626 [Arabidopsis lyrata subsp. lyrata]
          Length = 1014

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   GRLQGIRKLYLYRNQLGTKTRNDLKFITSLTNCTNLETLSIANNFLKGPLPDSISNLSVK 181
           G+++ ++ L LY N LG+ +  DL+F+ SLTNCT+L+TLS+  N L G LP SI+NLS+ 
Sbjct: 307 GKVRNLQLLELYGNFLGSYSSGDLEFLGSLTNCTHLQTLSVGENRLGGDLPASIANLSIN 366

Query: 182 IIEAQ--QNQING 214
           +I     +N I+G
Sbjct: 367 LIHLSLGKNHISG 379


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