BLASTX nr result

ID: Cimicifuga21_contig00012749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012749
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 ...   205   1e-50
ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arab...   197   3e-48
ref|XP_002314175.1| predicted protein [Populus trichocarpa] gi|2...   195   1e-47
ref|NP_200749.1| Rab5-interacting family protein [Arabidopsis th...   195   1e-47
ref|XP_002298350.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47

>ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 homolog [Vitis
           vinifera] gi|297746059|emb|CBI16115.3| unnamed protein
           product [Vitis vinifera]
          Length = 129

 Score =  205 bits (522), Expect = 1e-50
 Identities = 98/129 (75%), Positives = 109/129 (84%)
 Frame = -2

Query: 714 MKQGKSVKSNLAKQKQQQNGDVSPFKFAKLLDPDASWDKDQLGDVLHWIRQLVGLVCGLL 535
           MK+GKSVKSN  +    QNG +SPFKFAKLLDP+ASWDKDQLGDVLHWIRQ V LVCGLL
Sbjct: 1   MKEGKSVKSNGQQHHHDQNGHLSPFKFAKLLDPEASWDKDQLGDVLHWIRQAVALVCGLL 60

Query: 534 WGTIPLIGGIWIVLFLVLSSXXXXXXXXXILKVDEEDFGGHAALLQEGLFASLTLFLLAW 355
           WG+IPL+GGIWI+LFL++SS         ILK+DEEDFGGH ALLQEGLFAS+TLFLLAW
Sbjct: 61  WGSIPLVGGIWIILFLLISSGIIYGYYAIILKIDEEDFGGHGALLQEGLFASITLFLLAW 120

Query: 354 ILVYSLAHF 328
           ILVYSL HF
Sbjct: 121 ILVYSLVHF 129


>ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arabidopsis lyrata subsp.
           lyrata] gi|297312164|gb|EFH42588.1| hypothetical protein
           ARALYDRAFT_919171 [Arabidopsis lyrata subsp. lyrata]
          Length = 129

 Score =  197 bits (501), Expect = 3e-48
 Identities = 95/129 (73%), Positives = 106/129 (82%)
 Frame = -2

Query: 714 MKQGKSVKSNLAKQKQQQNGDVSPFKFAKLLDPDASWDKDQLGDVLHWIRQLVGLVCGLL 535
           M++ KS K N  ++   QN  +SP K AKL DPDASWDKDQLGDVLHWIRQ+VGL+CGLL
Sbjct: 1   MRESKSAKLNQLQEDNHQNVHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLICGLL 60

Query: 534 WGTIPLIGGIWIVLFLVLSSXXXXXXXXXILKVDEEDFGGHAALLQEGLFASLTLFLLAW 355
           WG+IPL+GGIWI+LFL +SS         ILKVDEEDFGGHAALLQEGLFASLTLFLLAW
Sbjct: 61  WGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLAW 120

Query: 354 ILVYSLAHF 328
           ILVYSLAHF
Sbjct: 121 ILVYSLAHF 129


>ref|XP_002314175.1| predicted protein [Populus trichocarpa] gi|222850583|gb|EEE88130.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  195 bits (496), Expect = 1e-47
 Identities = 96/133 (72%), Positives = 109/133 (81%), Gaps = 4/133 (3%)
 Frame = -2

Query: 714 MKQGKSV----KSNLAKQKQQQNGDVSPFKFAKLLDPDASWDKDQLGDVLHWIRQLVGLV 547
           MK+GKS      SN  +Q Q QNG  SP KFAKLLDP+ASWDKDQLGDVLHWIRQ+V LV
Sbjct: 1   MKEGKSAAKLNNSNNQQQHQHQNGHFSPSKFAKLLDPEASWDKDQLGDVLHWIRQVVALV 60

Query: 546 CGLLWGTIPLIGGIWIVLFLVLSSXXXXXXXXXILKVDEEDFGGHAALLQEGLFASLTLF 367
           CG+LWGTIPL+GGIWI LFL++SS         ILK+DE+DFGGH+ALLQEGLFAS+TLF
Sbjct: 61  CGILWGTIPLVGGIWIGLFLLISSGIIYGYYAMILKIDEDDFGGHSALLQEGLFASITLF 120

Query: 366 LLAWILVYSLAHF 328
           LL+WILVYSLAHF
Sbjct: 121 LLSWILVYSLAHF 133


>ref|NP_200749.1| Rab5-interacting family protein [Arabidopsis thaliana]
           gi|46931208|gb|AAT06408.1| At5g59410 [Arabidopsis
           thaliana] gi|332009799|gb|AED97182.1| Rab5-interacting
           family protein [Arabidopsis thaliana]
          Length = 130

 Score =  195 bits (496), Expect = 1e-47
 Identities = 97/130 (74%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
 Frame = -2

Query: 714 MKQGKSVKSN-LAKQKQQQNGDVSPFKFAKLLDPDASWDKDQLGDVLHWIRQLVGLVCGL 538
           MK+ KS K N L +Q+  QN  +SP K AKL DPDASWDKDQLGDVLHWIRQ+VGL+ GL
Sbjct: 1   MKESKSAKLNQLQQQENHQNAHLSPSKLAKLFDPDASWDKDQLGDVLHWIRQVVGLISGL 60

Query: 537 LWGTIPLIGGIWIVLFLVLSSXXXXXXXXXILKVDEEDFGGHAALLQEGLFASLTLFLLA 358
           LWG+IPL+GGIWI+LFL +SS         ILKVDEEDFGGHAALLQEGLFASLTLFLLA
Sbjct: 61  LWGSIPLVGGIWIILFLAISSGIVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLA 120

Query: 357 WILVYSLAHF 328
           WILVYSLAHF
Sbjct: 121 WILVYSLAHF 130


>ref|XP_002298350.1| predicted protein [Populus trichocarpa] gi|222845608|gb|EEE83155.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  194 bits (492), Expect = 3e-47
 Identities = 93/132 (70%), Positives = 109/132 (82%), Gaps = 3/132 (2%)
 Frame = -2

Query: 714 MKQGKS---VKSNLAKQKQQQNGDVSPFKFAKLLDPDASWDKDQLGDVLHWIRQLVGLVC 544
           MK+GKS   + +N  +Q+Q QNG +SPFK AKLLDP+ASWDKDQLGDVLHWIRQ+V LVC
Sbjct: 1   MKEGKSSAKLNNNNNQQQQHQNGHLSPFKLAKLLDPEASWDKDQLGDVLHWIRQVVALVC 60

Query: 543 GLLWGTIPLIGGIWIVLFLVLSSXXXXXXXXXILKVDEEDFGGHAALLQEGLFASLTLFL 364
           GLLWG IPL+GGIWI LFL++SS         ILK+DE+DFGGH  LLQEGLFAS+TLFL
Sbjct: 61  GLLWGAIPLVGGIWIALFLLISSGIIYVYYGMILKIDEDDFGGHGTLLQEGLFASITLFL 120

Query: 363 LAWILVYSLAHF 328
           L+WIL+YSLAHF
Sbjct: 121 LSWILMYSLAHF 132


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