BLASTX nr result

ID: Cimicifuga21_contig00012742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012742
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314650.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106
emb|CBI35820.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_002268906.1| PREDICTED: probable complex I intermediate-a...   385   e-104
ref|XP_002457266.1| hypothetical protein SORBIDRAFT_03g004460 [S...   381   e-103
emb|CAN61795.1| hypothetical protein VITISV_015801 [Vitis vinifera]   381   e-103

>ref|XP_002314650.1| predicted protein [Populus trichocarpa] gi|222863690|gb|EEF00821.1|
            predicted protein [Populus trichocarpa]
          Length = 225

 Score =  391 bits (1004), Expect = e-106
 Identities = 183/225 (81%), Positives = 202/225 (89%)
 Frame = -1

Query: 1129 MSRFRALWRSTMDATKKALTWSADDLMPPSERYVFNFNSKEELKKWHLYSDSEYGGLSSA 950
            MSRFR+LW++++DATKKALTW+ +DLMPP+ER +FNFNS+EELKKWHLYSDSEYGG SSA
Sbjct: 1    MSRFRSLWQASLDATKKALTWNVEDLMPPTERLIFNFNSREELKKWHLYSDSEYGGSSSA 60

Query: 949  SLEIKDTENGPSGIFSGNLSLDVSEDSARRINRSGFCGMRSKKFDGFIDLDAYDTIALKL 770
            SLE  D  NG  G+FSGNLSLDV+E S   I+RSGFCGMRSKKFDGFIDLDAYDTIALKL
Sbjct: 61   SLEFMDEGNGLKGVFSGNLSLDVAEGSKWNISRSGFCGMRSKKFDGFIDLDAYDTIALKL 120

Query: 769  RGDGRCYISTIYTENWVNSPGQQEDNSWQAFVFVPKDNWYITKIPLERYLPTWRGNVIDA 590
            +GDGR YISTIYTENWVNSPGQ EDNSWQAFVFVPKDNWYI +IPL RYLPTWRGNVIDA
Sbjct: 121  KGDGRSYISTIYTENWVNSPGQMEDNSWQAFVFVPKDNWYIARIPLARYLPTWRGNVIDA 180

Query: 589  KMEMNPSRIVGMSLSVNAAGGFAGAKSGPGDFRVEIDWIKALRTQ 455
             MEMN SRI+GMSLSVNA GG  GA+SGPGDF+VE+DWIKA RTQ
Sbjct: 181  SMEMNQSRILGMSLSVNAGGGIPGARSGPGDFKVELDWIKAFRTQ 225


>emb|CBI35820.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  390 bits (1001), Expect = e-106
 Identities = 181/225 (80%), Positives = 205/225 (91%)
 Frame = -1

Query: 1129 MSRFRALWRSTMDATKKALTWSADDLMPPSERYVFNFNSKEELKKWHLYSDSEYGGLSSA 950
            MSRFR+LW+++++AT+KALTW+ ++ +PPSERY+FNFNSKEELKKWHLYSDSEYGG+SSA
Sbjct: 1    MSRFRSLWQASLNATRKALTWNVENWIPPSERYIFNFNSKEELKKWHLYSDSEYGGMSSA 60

Query: 949  SLEIKDTENGPSGIFSGNLSLDVSEDSARRINRSGFCGMRSKKFDGFIDLDAYDTIALKL 770
            SLEI D  NG SGIFSGNLSLD+ E S   I R GFCGMRSKKFDGFIDL++YDTIALK+
Sbjct: 61   SLEIMDAGNGLSGIFSGNLSLDLIEGSKWNIRRGGFCGMRSKKFDGFIDLESYDTIALKV 120

Query: 769  RGDGRCYISTIYTENWVNSPGQQEDNSWQAFVFVPKDNWYITKIPLERYLPTWRGNVIDA 590
            +GDGRCYISTIYTENWVNSP QQEDNSWQAFVFVPKDNWYITKIPL  YLPTWRGNVIDA
Sbjct: 121  KGDGRCYISTIYTENWVNSPAQQEDNSWQAFVFVPKDNWYITKIPLAHYLPTWRGNVIDA 180

Query: 589  KMEMNPSRIVGMSLSVNAAGGFAGAKSGPGDFRVEIDWIKALRTQ 455
            ++EMNPSRIVGMSLSVN+ GG  GA +GPGDF++EIDWIKALRTQ
Sbjct: 181  EIEMNPSRIVGMSLSVNSGGGVPGATTGPGDFKLEIDWIKALRTQ 225


>ref|XP_002268906.1| PREDICTED: probable complex I intermediate-associated protein 30-like
            isoform 1 [Vitis vinifera]
          Length = 227

 Score =  385 bits (988), Expect = e-104
 Identities = 181/227 (79%), Positives = 205/227 (90%), Gaps = 2/227 (0%)
 Frame = -1

Query: 1129 MSRFRALWRSTMDATKKALTWSADDLMPPSERYVFNFNSKEELKKWHLYSDSEYGGLSSA 950
            MSRFR+LW+++++AT+KALTW+ ++ +PPSERY+FNFNSKEELKKWHLYSDSEYGG+SSA
Sbjct: 1    MSRFRSLWQASLNATRKALTWNVENWIPPSERYIFNFNSKEELKKWHLYSDSEYGGMSSA 60

Query: 949  SLEIKDTENGPSG--IFSGNLSLDVSEDSARRINRSGFCGMRSKKFDGFIDLDAYDTIAL 776
            SLEI D  NG SG  IFSGNLSLD+ E S   I R GFCGMRSKKFDGFIDL++YDTIAL
Sbjct: 61   SLEIMDAGNGLSGTGIFSGNLSLDLIEGSKWNIRRGGFCGMRSKKFDGFIDLESYDTIAL 120

Query: 775  KLRGDGRCYISTIYTENWVNSPGQQEDNSWQAFVFVPKDNWYITKIPLERYLPTWRGNVI 596
            K++GDGRCYISTIYTENWVNSP QQEDNSWQAFVFVPKDNWYITKIPL  YLPTWRGNVI
Sbjct: 121  KVKGDGRCYISTIYTENWVNSPAQQEDNSWQAFVFVPKDNWYITKIPLAHYLPTWRGNVI 180

Query: 595  DAKMEMNPSRIVGMSLSVNAAGGFAGAKSGPGDFRVEIDWIKALRTQ 455
            DA++EMNPSRIVGMSLSVN+ GG  GA +GPGDF++EIDWIKALRTQ
Sbjct: 181  DAEIEMNPSRIVGMSLSVNSGGGVPGATTGPGDFKLEIDWIKALRTQ 227


>ref|XP_002457266.1| hypothetical protein SORBIDRAFT_03g004460 [Sorghum bicolor]
            gi|241929241|gb|EES02386.1| hypothetical protein
            SORBIDRAFT_03g004460 [Sorghum bicolor]
          Length = 229

 Score =  381 bits (978), Expect = e-103
 Identities = 176/228 (77%), Positives = 206/228 (90%), Gaps = 4/228 (1%)
 Frame = -1

Query: 1129 MSRFRALWRSTMDATKKALTWSADDLMPPSERYVFNFNSKEELKKWHLYSDSEYGGLSSA 950
            MSR RALW+++ +ATK+AL WS+DDL+PP+ERY+FNFNSK+ELK+WHLYSDSEYGGLSSA
Sbjct: 1    MSRLRALWQASFNATKRALVWSSDDLIPPTERYIFNFNSKDELKRWHLYSDSEYGGLSSA 60

Query: 949  SLEIKDTENGP----SGIFSGNLSLDVSEDSARRINRSGFCGMRSKKFDGFIDLDAYDTI 782
            SLEI D  +G     +G+FSGNLSLD+SE+S  RI R GFCGMRSKKFDGFIDLDAYDTI
Sbjct: 61   SLEITDGTSGGDTPLTGVFSGNLSLDMSEESTWRIRRYGFCGMRSKKFDGFIDLDAYDTI 120

Query: 781  ALKLRGDGRCYISTIYTENWVNSPGQQEDNSWQAFVFVPKDNWYITKIPLERYLPTWRGN 602
            A+K++GDGRCYISTIYTENWVNSPGQQEDNSWQAFV++ +D W + KIPL+RYLPTWRGN
Sbjct: 121  AMKIKGDGRCYISTIYTENWVNSPGQQEDNSWQAFVYISQDRWQVLKIPLDRYLPTWRGN 180

Query: 601  VIDAKMEMNPSRIVGMSLSVNAAGGFAGAKSGPGDFRVEIDWIKALRT 458
            VI+AK+EMNP+RIVGMSLSVNA GG  GAK+GPGDFR+E+DWIKALRT
Sbjct: 181  VIEAKLEMNPARIVGMSLSVNAEGGVPGAKTGPGDFRLEVDWIKALRT 228


>emb|CAN61795.1| hypothetical protein VITISV_015801 [Vitis vinifera]
          Length = 237

 Score =  381 bits (978), Expect = e-103
 Identities = 181/237 (76%), Positives = 205/237 (86%), Gaps = 12/237 (5%)
 Frame = -1

Query: 1129 MSRFRALWRSTMDATKKALTWSADDLMPPSERYVFNFNSKEELKKWHLYSDSEYGGLSSA 950
            MSRFR+LW+++++AT+KALTW+ ++ +PPSERY+FNFNSKEELKKWHLYSDSEYGG+SSA
Sbjct: 1    MSRFRSLWQASLNATRKALTWNVENWIPPSERYIFNFNSKEELKKWHLYSDSEYGGMSSA 60

Query: 949  SLEIKDTENGPSGIFSGNLSLDVSEDSARRINRSGFCGMRSKKFDGFIDLDAYDTIALKL 770
            SLEI D  NG SGIFSGNLSLD+ E S   I R GFCGMRSKKFDGFIDL++YDTIALK+
Sbjct: 61   SLEIMDAGNGLSGIFSGNLSLDLIEGSKWNIRRGGFCGMRSKKFDGFIDLESYDTIALKV 120

Query: 769  RGDGRCYISTIYTENWVNSPGQQEDNSWQAFVFVPKDNWYITK------------IPLER 626
            +GDGRCYISTIYTENWVNSP QQEDNSWQAFVFVPKDNWYITK            IPL  
Sbjct: 121  KGDGRCYISTIYTENWVNSPAQQEDNSWQAFVFVPKDNWYITKANLTVILDYHTTIPLAH 180

Query: 625  YLPTWRGNVIDAKMEMNPSRIVGMSLSVNAAGGFAGAKSGPGDFRVEIDWIKALRTQ 455
            YLPTWRGNVIDA++EMNPSRIVGMSLSVN+ GG  GA +GPGDF++EIDWIKALRTQ
Sbjct: 181  YLPTWRGNVIDAEIEMNPSRIVGMSLSVNSGGGVPGATTGPGDFKLEIDWIKALRTQ 237


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