BLASTX nr result

ID: Cimicifuga21_contig00012734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012734
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]   120   6e-25
ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...   118   3e-24
emb|CBI22195.3| unnamed protein product [Vitis vinifera]              118   3e-24
ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...   118   3e-24
ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|2...   110   6e-22

>emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]
          Length = 2161

 Score =  120 bits (301), Expect = 6e-25
 Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +3

Query: 246  NFPDPTKAKLCRQAAVSYFNCVFQANTEAAEESYQMLQRHSPPVLSSLKVSETEREVDGL 425
            ++ DPT  +L +QAAVSYF CVFQA+ E  EE +Q+  R SPP  + ++  + +     L
Sbjct: 1585 SYYDPTAVELYKQAAVSYFGCVFQASKEEGEEVFQISHRFSPPTSNLVQTPKMDSTFAKL 1644

Query: 426  PKRLILSISGASYEVRLATLKWLLRFFKATG-VSGTYSHSTSAIYSIRQWAETNLPLTLF 602
            P+RL+LS+S  SYEVR AT+KWLL+F K+TG V  +   S+  +  I +WA+TNL  TL 
Sbjct: 1645 PERLVLSMSSXSYEVRHATMKWLLQFLKSTGSVRESNDQSSDGVMIIHKWAKTNLQATLM 1704

Query: 603  QLLAKEEHTRC 635
            +LL  E H +C
Sbjct: 1705 KLLTVENHHKC 1715


>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
            vinifera]
          Length = 2223

 Score =  118 bits (295), Expect = 3e-24
 Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
 Frame = +3

Query: 246  NFPDPTKAKLCRQAAVSYFNCVFQANTEAAEESYQMLQRHSPPVLSSLKVSETEREVDGL 425
            ++ DPT  +L +QAAVSYF CV QA+ E  EE +Q+  R SPP  + ++  + +     L
Sbjct: 1647 SYYDPTAVELYKQAAVSYFGCVLQASKEEGEEVFQISHRFSPPTSNLVQTPKMDSTFAKL 1706

Query: 426  PKRLILSISGASYEVRLATLKWLLRFFKATG-VSGTYSHSTSAIYSIRQWAETNLPLTLF 602
            P+RL+LS+S  SYEVR AT+KWLL+F K+TG V  +   S+  +  I +WA+TNL  TL 
Sbjct: 1707 PERLVLSMSSPSYEVRHATMKWLLQFLKSTGSVRESNDQSSDGVMIIHKWAKTNLQATLM 1766

Query: 603  QLLAKEEHTRC 635
            +LL  E H +C
Sbjct: 1767 KLLTVENHHKC 1777


>emb|CBI22195.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  118 bits (295), Expect = 3e-24
 Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
 Frame = +3

Query: 246  NFPDPTKAKLCRQAAVSYFNCVFQANTEAAEESYQMLQRHSPPVLSSLKVSETEREVDGL 425
            ++ DPT  +L +QAAVSYF CV QA+ E  EE +Q+  R SPP  + ++  + +     L
Sbjct: 1200 SYYDPTAVELYKQAAVSYFGCVLQASKEEGEEVFQISHRFSPPTSNLVQTPKMDSTFAKL 1259

Query: 426  PKRLILSISGASYEVRLATLKWLLRFFKATG-VSGTYSHSTSAIYSIRQWAETNLPLTLF 602
            P+RL+LS+S  SYEVR AT+KWLL+F K+TG V  +   S+  +  I +WA+TNL  TL 
Sbjct: 1260 PERLVLSMSSPSYEVRHATMKWLLQFLKSTGSVRESNDQSSDGVMIIHKWAKTNLQATLM 1319

Query: 603  QLLAKEEHTRC 635
            +LL  E H +C
Sbjct: 1320 KLLTVENHHKC 1330


>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
            gi|223543500|gb|EEF45031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2190

 Score =  118 bits (295), Expect = 3e-24
 Identities = 72/149 (48%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
 Frame = +3

Query: 243  LNFPDPTKAKLCRQAAVSYFNCVFQANTEAAEESYQMLQRHSPPVLSSLKVSETEREVDG 422
            L++ DPT ++L  QAA+SYF+CVFQA+    EE  QM Q H  P +  L +SET     G
Sbjct: 1619 LSYYDPTISELREQAAISYFSCVFQASK--VEEILQMPQMHLSPDVKLLNLSETN-SFTG 1675

Query: 423  LPKRLILSISGASYEVRLATLKWLLRFFKAT----GVSGTYSHSTSAIYSIRQWAETNLP 590
            LP+RLI S+S +SYEVRLATLKWLL+F K+T     V G +S   S + SI+QW   NL 
Sbjct: 1676 LPERLIRSLSDSSYEVRLATLKWLLKFLKSTESKIEVHGIFS---SGVRSIQQWNNANLQ 1732

Query: 591  LTLFQLLAKEEHTRCMWCLNMVMPIFGFY 677
             T+ +LL  EE+ RCM   N ++ I  F+
Sbjct: 1733 ATMLKLLNSEENHRCM---NYILRILSFW 1758


>ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|222848947|gb|EEE86494.1|
            predicted protein [Populus trichocarpa]
          Length = 2134

 Score =  110 bits (275), Expect = 6e-22
 Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
 Frame = +3

Query: 183  RDMVFSHCMVFFDGEHFLLTLNFPDPTKAKLCRQAAVSYFNCVFQANTEAAEESYQMLQR 362
            R +++  C    D E     +++ DPT A+L  QA +SYF+CV QA+ +  EE  Q  Q 
Sbjct: 1549 RSLLWKLCTECLDVEDSF-GVSYYDPTVAELREQATISYFSCVLQASKDGMEEVLQKPQA 1607

Query: 363  HSPPVLSSLKVSETEREVDGLPKRLILSISGASYEVRLATLKWLLRFFKAT-GVSGTYSH 539
            H    L  L + ET+     L KRLI S++ +SYEVRLATLKWLL+F K+T  +S  +  
Sbjct: 1608 HLSHDLKLLNLPETKETFVSLEKRLISSLTDSSYEVRLATLKWLLKFLKSTESISDVHHL 1667

Query: 540  STSAIYSIRQWAETNLPLTLFQLLAKEEHTRCMWCLNMVM 659
            S+SAI  I+ W++ NL  T+ +LL  E++ RC + +  ++
Sbjct: 1668 SSSAIGIIQHWSKPNLQETMVKLLDSEKYHRCKYYILRIL 1707


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