BLASTX nr result

ID: Cimicifuga21_contig00012733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012733
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248...    77   1e-12
ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248...    67   2e-09

>ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248159 [Vitis vinifera]
          Length = 1756

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
 Frame = +3

Query: 24   STKFRIRPKTTWLDPGSSSEPKSIPAVGDGTSSECDLTSQGPSYMEENLV---SEAPKEN 194
            STK RIR K    DP   S+PK   +V D ++  CD  S+    + E      ++ P  +
Sbjct: 1215 STKLRIRSKKILEDPEIPSDPKIKSSVEDWSNGRCDTLSESQLEIAEVPDCDDTDRPHSD 1274

Query: 195  EG--NSRSNPESQIDKISRLSNLDSKKSHESSNNRMYNAVYKRSKPHTARAISENDGVNM 368
             G  N     E+ I++ SR    DS+  +   NN+MYNAVY+RS+ +  R  SE +G  M
Sbjct: 1275 HGDWNGLLKSEAAIEQNSRSVLQDSQGLYSHVNNKMYNAVYRRSRSYRTRTNSEGEGGGM 1334

Query: 369  EEGTSNASN 395
            EE TSNASN
Sbjct: 1335 EESTSNASN 1343


>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
          Length = 1766

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 44/127 (34%), Positives = 64/127 (50%)
 Frame = +3

Query: 15   PPVSTKFRIRPKTTWLDPGSSSEPKSIPAVGDGTSSECDLTSQGPSYMEENLVSEAPKEN 194
            P  S K RIR K    DP   S+ K +    + ++   DL S+  S ME N +SE P+E 
Sbjct: 1249 PANSLKLRIRSKRIVRDPNFPSKLKFVTGTEEPSNIGGDLMSRSHSRMEHNQISEVPEE- 1307

Query: 195  EGNSRSNPESQIDKISRLSNLDSKKSHESSNNRMYNAVYKRSKPHTARAISENDGVNMEE 374
                        DK+  + +    +SH  S+ + Y+AV+KR+K + AR  +E  G +MEE
Sbjct: 1308 ------------DKVIEMPS-SPHRSHSDSDKQNYDAVHKRAKSYMARTNAEGYGGSMEE 1354

Query: 375  GTSNASN 395
              SNA N
Sbjct: 1355 SASNAGN 1361


Top