BLASTX nr result
ID: Cimicifuga21_contig00012710
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012710
(1652 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 914 0.0
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor... 910 0.0
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor... 908 0.0
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor... 902 0.0
ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Med... 900 0.0
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 914 bits (2362), Expect = 0.0
Identities = 461/525 (87%), Positives = 488/525 (92%), Gaps = 5/525 (0%)
Frame = +1
Query: 91 MTTERKRKVSLFDVVDETSVSAKIAKLNG-GAVNNSQTN----RWTGRPFSANYFAILEK 255
M TERKRKVSLFDVVDETSVSAKI+K NG GA+NN+ N RW GRP+S Y+ ILEK
Sbjct: 1 MGTERKRKVSLFDVVDETSVSAKISKSNGSGAINNNNNNNLVNRWNGRPYSQRYYEILEK 60
Query: 256 RKTLPVWQQKQEFLQALNANQSLILVGETGSGKTTQIPQFVLDAVNLETPDRRKKMMIAC 435
R+TLPVW QK+EFLQ L ANQSLILVGETGSGKTTQIPQFVL+AV++ETPD+RKKMMIAC
Sbjct: 61 RRTLPVWHQKEEFLQVLKANQSLILVGETGSGKTTQIPQFVLEAVDIETPDKRKKMMIAC 120
Query: 436 TQPXXXXXXXXXXXXXQEMDVNIGEEVGYSIRFEDCSSSKTLLKYLTDGMLLREAMTDPL 615
TQP +EMDV IGEEVGYSIRFEDCSS++T+LKYLTDGMLLREAMTDPL
Sbjct: 121 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPL 180
Query: 616 LERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLM 795
LERYKVIILDEAHERTLATDVLFGLLKEVL+NRPDLK+VVMSATLEAEKFQ YF+GAPLM
Sbjct: 181 LERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKVVVMSATLEAEKFQGYFNGAPLM 240
Query: 796 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPEGDILVFLTGEEEIEDACRKINK 975
KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE GDILVFLTGEEEIEDAC+KI+K
Sbjct: 241 KVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEGAGDILVFLTGEEEIEDACKKISK 300
Query: 976 EVANLGEQVGPVKVVPLYSTLPPAMQQKIFDSAPPPLVESGPPGRKIVVSTNIAETSLTI 1155
E+ANLG+QVGPVK VPLYSTLPPAMQQKIF+ APPPL E GPPGRKIVVSTNIAETSLTI
Sbjct: 301 EIANLGDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPLTEGGPPGRKIVVSTNIAETSLTI 360
Query: 1156 DGIVYVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTERSF 1335
DGIV+VIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTE+SF
Sbjct: 361 DGIVFVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSF 420
Query: 1336 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 1515
NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD
Sbjct: 421 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALD 480
Query: 1516 DDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 1650
DDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS
Sbjct: 481 DDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 525
>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 1 [Glycine max]
Length = 721
Score = 910 bits (2353), Expect = 0.0
Identities = 458/520 (88%), Positives = 481/520 (92%)
Frame = +1
Query: 91 MTTERKRKVSLFDVVDETSVSAKIAKLNGGAVNNSQTNRWTGRPFSANYFAILEKRKTLP 270
M TERKRKVSLFDVVD+++ AK+AK NGGA N+ TN WT RP+S YF ILEKRKTLP
Sbjct: 1 MGTERKRKVSLFDVVDDSA--AKMAKSNGGAAANNLTNHWTARPYSQRYFEILEKRKTLP 58
Query: 271 VWQQKQEFLQALNANQSLILVGETGSGKTTQIPQFVLDAVNLETPDRRKKMMIACTQPXX 450
VW QK+EFLQ L NQ+LILVGETGSGKTTQIPQFVLDAV LETPD+R+KMM+ACTQP
Sbjct: 59 VWHQKEEFLQVLKDNQTLILVGETGSGKTTQIPQFVLDAVELETPDKRRKMMVACTQPRR 118
Query: 451 XXXXXXXXXXXQEMDVNIGEEVGYSIRFEDCSSSKTLLKYLTDGMLLREAMTDPLLERYK 630
+EMDV IGEEVGYSIRFEDCSS+KT+LKYLTDGMLLREAMTDPLLERYK
Sbjct: 119 VAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYK 178
Query: 631 VIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKVPGR 810
VIILDEAHERTLATDVLFGLLKEVL+NRPD+KLVVMSATLEAEKFQ YF GAPLMKVPGR
Sbjct: 179 VIILDEAHERTLATDVLFGLLKEVLKNRPDMKLVVMSATLEAEKFQGYFFGAPLMKVPGR 238
Query: 811 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPEGDILVFLTGEEEIEDACRKINKEVANL 990
LHPVEIFYTQEPERDYLEA IRTVVQIHMCEP GDILVFLTGEEEIEDACRKI KE++NL
Sbjct: 239 LHPVEIFYTQEPERDYLEAGIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEISNL 298
Query: 991 GEQVGPVKVVPLYSTLPPAMQQKIFDSAPPPLVESGPPGRKIVVSTNIAETSLTIDGIVY 1170
G+QVGPVKVVPLYSTLPPAMQQKIF+ APPPL E GPPGRKIVVSTNIAETSLTIDGIVY
Sbjct: 299 GDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPLKEGGPPGRKIVVSTNIAETSLTIDGIVY 358
Query: 1171 VIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQ 1350
VIDPGFAKQKVYNPRIRVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTE+SFNNDLQ
Sbjct: 359 VIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 418
Query: 1351 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 1530
PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL
Sbjct: 419 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 478
Query: 1531 TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 1650
TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILS+SAMLS
Sbjct: 479 TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLS 518
>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 720
Score = 908 bits (2346), Expect = 0.0
Identities = 459/520 (88%), Positives = 480/520 (92%)
Frame = +1
Query: 91 MTTERKRKVSLFDVVDETSVSAKIAKLNGGAVNNSQTNRWTGRPFSANYFAILEKRKTLP 270
M TERKRKVSLFDVVD+++ AK+AK NGGA NN N WT RP+S YF ILEKRKTLP
Sbjct: 1 MGTERKRKVSLFDVVDDSA--AKMAKTNGGAANNL-INHWTSRPYSQRYFEILEKRKTLP 57
Query: 271 VWQQKQEFLQALNANQSLILVGETGSGKTTQIPQFVLDAVNLETPDRRKKMMIACTQPXX 450
VW QK+EFLQ L NQ+LILVGETGSGKTTQIPQFVLDAV LETPD+RKKMMIACTQP
Sbjct: 58 VWHQKEEFLQVLKDNQTLILVGETGSGKTTQIPQFVLDAVELETPDKRKKMMIACTQPRR 117
Query: 451 XXXXXXXXXXXQEMDVNIGEEVGYSIRFEDCSSSKTLLKYLTDGMLLREAMTDPLLERYK 630
+EMDV IGEEVGYSIRFEDCSS+KT+LKYLTDGMLLREAMTDPLLERYK
Sbjct: 118 VAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAKTVLKYLTDGMLLREAMTDPLLERYK 177
Query: 631 VIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKVPGR 810
VIILDEAHERTLATDVLFGLLKEVL+NRPD+KLVVMSATLEAEKFQ YF GAPLMKVPGR
Sbjct: 178 VIILDEAHERTLATDVLFGLLKEVLKNRPDMKLVVMSATLEAEKFQGYFFGAPLMKVPGR 237
Query: 811 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPEGDILVFLTGEEEIEDACRKINKEVANL 990
LHPVEIFYTQEPERDYLEA IRTVVQIHMCEP GDILVFLTGEEEIEDACRKI KE++NL
Sbjct: 238 LHPVEIFYTQEPERDYLEAGIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKITKEISNL 297
Query: 991 GEQVGPVKVVPLYSTLPPAMQQKIFDSAPPPLVESGPPGRKIVVSTNIAETSLTIDGIVY 1170
G+QVGPVKVVPLYSTLPPAMQQKIF+ APPPL E GPPGRKIVVSTNIAETSLTIDGIVY
Sbjct: 298 GDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPLKEGGPPGRKIVVSTNIAETSLTIDGIVY 357
Query: 1171 VIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQ 1350
VIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTE+SFNNDLQ
Sbjct: 358 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDLQ 417
Query: 1351 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 1530
PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL
Sbjct: 418 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 477
Query: 1531 TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 1650
TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILS+SAMLS
Sbjct: 478 TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLS 517
>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 722
Score = 902 bits (2330), Expect = 0.0
Identities = 454/521 (87%), Positives = 485/521 (93%), Gaps = 1/521 (0%)
Frame = +1
Query: 91 MTTERKRKVSLFDVVDETSVSAKIAKLNGGAVN-NSQTNRWTGRPFSANYFAILEKRKTL 267
M TERKRKVSLFDVVD+ + AK++K NGGAV N+ NRW G+P+S Y ILEKRKTL
Sbjct: 1 MGTERKRKVSLFDVVDDAA--AKMSKSNGGAVAANNLINRWNGKPYSQRYHDILEKRKTL 58
Query: 268 PVWQQKQEFLQALNANQSLILVGETGSGKTTQIPQFVLDAVNLETPDRRKKMMIACTQPX 447
PVW QK+EFLQAL NQ+LILVGETGSGKTTQIPQFVL+AV++ET D+R+KMMIACTQP
Sbjct: 59 PVWHQKEEFLQALKDNQTLILVGETGSGKTTQIPQFVLEAVDIETTDKRRKMMIACTQPR 118
Query: 448 XXXXXXXXXXXXQEMDVNIGEEVGYSIRFEDCSSSKTLLKYLTDGMLLREAMTDPLLERY 627
+EMDV+IGEEVGYSIRFEDCSS++T+LKYLTDGMLLREAMTDPLLERY
Sbjct: 119 RVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERY 178
Query: 628 KVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKVPG 807
KVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQ YFSGAPLMKVPG
Sbjct: 179 KVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQGYFSGAPLMKVPG 238
Query: 808 RLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPEGDILVFLTGEEEIEDACRKINKEVAN 987
RLHPVEIFYTQ+PERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKINKE++N
Sbjct: 239 RLHPVEIFYTQDPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKINKEISN 298
Query: 988 LGEQVGPVKVVPLYSTLPPAMQQKIFDSAPPPLVESGPPGRKIVVSTNIAETSLTIDGIV 1167
+G+QVGPVKVVPLYSTLPPAMQQKIF+ APPP+ E GPPGRKIVVSTNIAETSLTIDGIV
Sbjct: 299 MGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEGGPPGRKIVVSTNIAETSLTIDGIV 358
Query: 1168 YVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTERSFNNDL 1347
YVIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTE+SFNNDL
Sbjct: 359 YVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDL 418
Query: 1348 QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 1527
QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN
Sbjct: 419 QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN 478
Query: 1528 LTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 1650
LTKLG+IMSEFPLDPQMSKMLVVSPEFNCSNEILS+SAMLS
Sbjct: 479 LTKLGQIMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLS 519
>ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Medicago truncatula]
gi|355480419|gb|AES61622.1| ATP-dependent RNA
helicase-like protein [Medicago truncatula]
Length = 721
Score = 900 bits (2326), Expect = 0.0
Identities = 452/520 (86%), Positives = 479/520 (92%)
Frame = +1
Query: 91 MTTERKRKVSLFDVVDETSVSAKIAKLNGGAVNNSQTNRWTGRPFSANYFAILEKRKTLP 270
M TERKRKVSLFDVVD+ + AK+ K NGG + N+ NRW G+P+S Y ILEKRKTLP
Sbjct: 1 MGTERKRKVSLFDVVDDAA--AKMVKTNGGLIGNNLINRWNGKPYSQRYHEILEKRKTLP 58
Query: 271 VWQQKQEFLQALNANQSLILVGETGSGKTTQIPQFVLDAVNLETPDRRKKMMIACTQPXX 450
VW QK++FL+ L NQ+LILVGETGSGKTTQIPQFVL+AV LE PD+RKKMMIACTQP
Sbjct: 59 VWHQKEDFLKVLKDNQTLILVGETGSGKTTQIPQFVLEAVELEAPDKRKKMMIACTQPRR 118
Query: 451 XXXXXXXXXXXQEMDVNIGEEVGYSIRFEDCSSSKTLLKYLTDGMLLREAMTDPLLERYK 630
+EMDV+IGEEVGYSIRFEDCSS++T+LKYLTDGMLLREAMTDPLLERYK
Sbjct: 119 VAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYK 178
Query: 631 VIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQAYFSGAPLMKVPGR 810
VIILDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF GAPLMKVPGR
Sbjct: 179 VIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPGR 238
Query: 811 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPEGDILVFLTGEEEIEDACRKINKEVANL 990
LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEP GDILVFLTGEEEIEDACRKI+KEVAN+
Sbjct: 239 LHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPAGDILVFLTGEEEIEDACRKISKEVANM 298
Query: 991 GEQVGPVKVVPLYSTLPPAMQQKIFDSAPPPLVESGPPGRKIVVSTNIAETSLTIDGIVY 1170
G+QVGPVK VPLYSTLPPAMQQKIF+ APPP+ E GPPGRKIVVSTNIAETSLTIDGIVY
Sbjct: 299 GDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPVKEGGPPGRKIVVSTNIAETSLTIDGIVY 358
Query: 1171 VIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQ 1350
VIDPGFAKQKVYNPR+RVESLLVSPIS+ASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQ
Sbjct: 359 VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQ 418
Query: 1351 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNL 1530
PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD+GNL
Sbjct: 419 PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNL 478
Query: 1531 TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 1650
TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS
Sbjct: 479 TKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLS 518