BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012709
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...   126   5e-27
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   126   5e-27
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...   125   1e-26
ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arab...   118   1e-24
gb|AAP40461.1| unknown protein [Arabidopsis thaliana]                 115   1e-23

>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score =  126 bits (316), Expect = 5e-27
 Identities = 75/141 (53%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
 Frame = -2

Query: 674 QEEQMRASQLYAFADLDVGLPKAVKKEERTIDALADPSAMQPNES---ADLAAIQGLIPP 504
           QEEQMRASQLY F+DLDVGLPKAV  +E+TI+   +P   QP +S   A+L +IQGL+PP
Sbjct: 257 QEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLANLPSIQGLLPP 316

Query: 503 QITVPSGWQPGMPVELPSDLXXXXXXXXXXXXXXXXPFGA--LGPKVEEQQPRP-AAHNP 333
            ITVPSGW+PGMPVELPS                  P  +  +  + EEQ PRP AAH  
Sbjct: 317 NITVPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPIPSRAEEQLPRPLAAHGL 376

Query: 332 PKEGAPIQVRYVELDINPDQD 270
            K   PI V +V+LDIN DQD
Sbjct: 377 QKAPEPIHVPHVQLDINLDQD 397


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  126 bits (316), Expect = 5e-27
 Identities = 75/141 (53%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
 Frame = -2

Query: 674  QEEQMRASQLYAFADLDVGLPKAVKKEERTIDALADPSAMQPNES---ADLAAIQGLIPP 504
            QEEQMRASQLY F+DLDVGLPKAV  +E+TI+   +P   QP +S   A+L +IQGL+PP
Sbjct: 1291 QEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLANLPSIQGLLPP 1350

Query: 503  QITVPSGWQPGMPVELPSDLXXXXXXXXXXXXXXXXPFGA--LGPKVEEQQPRP-AAHNP 333
             ITVPSGW+PGMPVELPS                  P  +  +  + EEQ PRP AAH  
Sbjct: 1351 NITVPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPIPSRAEEQLPRPLAAHGL 1410

Query: 332  PKEGAPIQVRYVELDINPDQD 270
             K   PI V +V+LDIN DQD
Sbjct: 1411 QKAPEPIHVPHVQLDINLDQD 1431


>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like [Cucumis sativus]
           gi|449520010|ref|XP_004167027.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like [Cucumis
           sativus]
          Length = 404

 Score =  125 bits (313), Expect = 1e-26
 Identities = 75/140 (53%), Positives = 92/140 (65%), Gaps = 5/140 (3%)
 Frame = -2

Query: 674 QEEQMRASQLYAFADLDVGLPKAVKKEERTIDALADPSAMQPNESADLAAIQGLIPPQIT 495
           Q+EQMRASQLY FA+LDVGLPKAV+  E+TI+ + +P A    ++  LAAIQGL+PP IT
Sbjct: 252 QDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNIT 311

Query: 494 VPSGWQPGMPVELPSDLXXXXXXXXXXXXXXXXPFGALG-PKVEEQQPRPAA----HNPP 330
           VPSGW+PGMPVELP DL                P  +L   +V+E Q RP A    H PP
Sbjct: 312 VPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPP 371

Query: 329 KEGAPIQVRYVELDINPDQD 270
           +   PIQVR+V+LDI  DQD
Sbjct: 372 E---PIQVRHVQLDI-LDQD 387


>ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arabidopsis lyrata subsp.
           lyrata] gi|297316830|gb|EFH47252.1| hypothetical protein
           ARALYDRAFT_487063 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score =  118 bits (295), Expect = 1e-24
 Identities = 68/139 (48%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
 Frame = -2

Query: 674 QEEQMRASQLYAFADLDVGLPKAVKKEERTIDALADPSAMQPNESADLAAIQGLIPPQIT 495
           Q+EQMRASQLYAFADLD+GLPK V+  E+ ++AL +P    P E+ D++AI  L+PP I 
Sbjct: 279 QDEQMRASQLYAFADLDIGLPKTVENMEKKVEALIEPPP-PPPEAMDISAIHNLLPPNIA 337

Query: 494 VPSGWQPGMPVELPSDLXXXXXXXXXXXXXXXXPFGAL-GPKVEEQQ---PRPAAHNPPK 327
           VPSGW+PGMPVELP DL                P  ++  P+ E+QQ   P    H PP 
Sbjct: 338 VPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAPRAEDQQHMRPPQGLHRPPD 397

Query: 326 EGAPIQVRYVELDINPDQD 270
               IQVR V+LDI  D D
Sbjct: 398 ---VIQVRAVQLDILEDDD 413


>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
          Length = 426

 Score =  115 bits (287), Expect = 1e-23
 Identities = 66/139 (47%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
 Frame = -2

Query: 674 QEEQMRASQLYAFADLDVGLPKAVKKEERTIDALADPSAMQPNESADLAAIQGLIPPQIT 495
           Q+EQMRASQLY FADLD+GLPK V+  E+ ++AL +P    P E+ D++AI  L+PP I 
Sbjct: 278 QDEQMRASQLYTFADLDIGLPKTVENMEKKVEALIEPPP--PPEAMDISAIHNLLPPNIA 335

Query: 494 VPSGWQPGMPVELPSDLXXXXXXXXXXXXXXXXPFGAL-GPKVEEQQ---PRPAAHNPPK 327
           VPSGW+PGMPVELP DL                P  ++  P+ E+ Q   P    H PP 
Sbjct: 336 VPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAPRAEDHQHMRPSQGLHRPPD 395

Query: 326 EGAPIQVRYVELDINPDQD 270
               IQVR V+LDI  D D
Sbjct: 396 ---VIQVRAVQLDILEDDD 411