BLASTX nr result

ID: Cimicifuga21_contig00012708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012708
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...    71   1e-10
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    71   1e-10
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...    70   2e-10
ref|XP_003629316.1| hypothetical protein MTR_8g075790 [Medicago ...    70   2e-10
ref|XP_003620798.1| hypothetical protein MTR_6g090580 [Medicago ...    69   3e-10

>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
 Frame = -2

Query: 178 QEEQMRASQLYAFADLDVGLPKVVKTEERTIDSLADPSATQPNES---ADLAAIQGRIPP 8
           QEEQMRASQLY F+DLDVGLPK V  +E+TI++  +P   QP +S   A+L +IQG +PP
Sbjct: 257 QEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLANLPSIQGLLPP 316

Query: 7   QI 2
            I
Sbjct: 317 NI 318


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
 Frame = -2

Query: 178  QEEQMRASQLYAFADLDVGLPKVVKTEERTIDSLADPSATQPNES---ADLAAIQGRIPP 8
            QEEQMRASQLY F+DLDVGLPK V  +E+TI++  +P   QP +S   A+L +IQG +PP
Sbjct: 1291 QEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPADSNPLANLPSIQGLLPP 1350

Query: 7    QI 2
             I
Sbjct: 1351 NI 1352


>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like [Cucumis sativus]
           gi|449520010|ref|XP_004167027.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like [Cucumis
           sativus]
          Length = 404

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/59 (57%), Positives = 45/59 (76%)
 Frame = -2

Query: 178 QEEQMRASQLYAFADLDVGLPKVVKTEERTIDSLADPSATQPNESADLAAIQGRIPPQI 2
           Q+EQMRASQLY FA+LDVGLPK V++ E+TI+ + +P A    ++  LAAIQG +PP I
Sbjct: 252 QDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNI 310


>ref|XP_003629316.1| hypothetical protein MTR_8g075790 [Medicago truncatula]
           gi|355523338|gb|AET03792.1| hypothetical protein
           MTR_8g075790 [Medicago truncatula]
          Length = 402

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/58 (55%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = -2

Query: 178 QEEQMRASQLYAFADLDVGLPKVVKTEERTIDSLAD-PSATQPNESADLAAIQGRIPP 8
           Q+EQMRASQLY FADLD+GLPK V+T+E+T++++ + P +   N   +L+AIQG +PP
Sbjct: 251 QDEQMRASQLYNFADLDIGLPKAVETKEKTVEAIIEPPPSVDTNPLGNLSAIQGMLPP 308


>ref|XP_003620798.1| hypothetical protein MTR_6g090580 [Medicago truncatula]
           gi|355495813|gb|AES77016.1| hypothetical protein
           MTR_6g090580 [Medicago truncatula]
          Length = 538

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
 Frame = -2

Query: 178 QEEQMRASQLYAFADLDVGLPKVVKTEERTIDSLADPSATQP---NESADLAAIQGRIPP 8
           Q+EQMRASQLY FADLD+GLPK  +T E+TI+++ +P   QP   N  A+L  IQG +PP
Sbjct: 251 QDEQMRASQLYNFADLDIGLPKSAETTEKTIEAIIEPPPLQPVDANSLANLPGIQGLLPP 310


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