BLASTX nr result

ID: Cimicifuga21_contig00012698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012698
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...   107   4e-21
ref|XP_002526475.1| protein binding protein, putative [Ricinus c...   107   5e-21
emb|CBI28974.3| unnamed protein product [Vitis vinifera]              103   5e-20
ref|XP_002274771.1| PREDICTED: ankyrin repeat-containing protein...   103   5e-20
ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-13

>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  107 bits (267), Expect = 4e-21
 Identities = 80/235 (34%), Positives = 117/235 (49%), Gaps = 30/235 (12%)
 Frame = -2

Query: 869 HLAAYRKHFQIIEVLLRTDVFHKVVDLYKINTIGLTAGDVLR---QHGINEEIGNILTRV 699
           HLA  RK  + I +L+  +     V++  IN  G TA DVL    Q G      +IL   
Sbjct: 182 HLATLRKQHETIRLLIGREAIAYGVEVNSINASGFTAKDVLDFILQSGGEYNDISILEMF 241

Query: 698 EQSTVVSL----TTPLP--------LHRTASNTSMDPLIILEELFKGLPMEKWAK---EI 564
           +Q+  +      T P          +++  ++TS +            P   W +   EI
Sbjct: 242 QQAGAMKAMDITTNPASTFQVEVKNINKNVNHTSQN----------SCPWNLWKELKLEI 291

Query: 563 ERYPSETRNALMVVAVLIATVTFQVALSPPGGF------------TCDYRNGLSGSALHN 420
           E   +ET+NALMVVA LIATVT+Q  LSPP GF            +   R+ L G A+  
Sbjct: 292 EESSTETQNALMVVATLIATVTYQATLSPPSGFWSAESRRSQTINSVQKRDILPGEAVMT 351

Query: 419 DLPVFLVLFSIINSIGFGTSIAMITVLTRWSPLKALLRIAVLSLAATYLCCIAYI 255
             P    +F++ N++GF  SIAMI++LT   PL+A LR+A+LS+ ATY+  + Y+
Sbjct: 352 GDPEVFAVFTVFNAVGFFASIAMISLLTSGFPLRAGLRLAILSMTATYVIAVIYM 406


>ref|XP_002526475.1| protein binding protein, putative [Ricinus communis]
           gi|223534150|gb|EEF35866.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score =  107 bits (266), Expect = 5e-21
 Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 24/222 (10%)
 Frame = -2

Query: 869 HLAAYRKHFQIIEVLLRTDVFHKVVDLYKINTIGLTAGDV----LRQHGINEEIGNILTR 702
           HLA +RK  +IIE+L+  D     V++  +N+ G T  D+    L+  G   +  NIL  
Sbjct: 25  HLATFRKQQEIIELLIGQDAAAFGVEINSMNSSGFTPKDIIDVILQSGGKYSDYINILEM 84

Query: 701 VEQSTVVSL--------TTPLPLHRTASNTSMDPLIILEELFKGLPMEKWAKEIERYPSE 546
            +Q+  V          T+P    R  +     P +    L++ L      KEIE    E
Sbjct: 85  FQQAGAVRAREIKTRVPTSPQVEARNINREPTTPPVHSWNLWRQL-----MKEIEDSSIE 139

Query: 545 TRNALMVVAVLIATVTFQVALSPPGGF------------TCDYRNGLSGSALHNDLPVFL 402
           T+NALMVVAVLIATVT+Q  LSPP GF            + + R+ L G A+    P   
Sbjct: 140 TQNALMVVAVLIATVTYQAILSPPSGFWSTESRNSHSINSVERRDVLPGEAVMATDPEVF 199

Query: 401 VLFSIINSIGFGTSIAMITVLTRWSPLKALLRIAVLSLAATY 276
            +F++ N++GF  S+AMI++LT   PL+A LR+A+LS+   +
Sbjct: 200 AVFTVFNALGFFASLAMISLLTSGFPLRACLRLAILSIVCPF 241


>emb|CBI28974.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  103 bits (257), Expect = 5e-20
 Identities = 83/228 (36%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
 Frame = -2

Query: 869 HLAAYRKHFQIIEVLLRT-DVFHKVVDLYKINTIGLTAGDVLR--QHGINEEIGNILT-- 705
           HLA  RK    +++LL   D+    VD+   N  G T  D+L   Q  +NE    IL   
Sbjct: 92  HLATARKQGLTMKLLLGDGDMAAAAVDVNLTNKSGFTVLDLLDVVQQIVNEPGDYILRDL 151

Query: 704 -------RVEQSTVVSLTTPLPLHRTASNT------SMDPLIILEELFKGLPMEKW---A 573
                  R  +    S      +H+ +S T      +   + ++E  F   P + W    
Sbjct: 152 LLRSGALRASELIKSSSAATPQVHQNSSITEPPQIQNQQNVFVMETSFLN-PSQLWKMSV 210

Query: 572 KEIERYPSETRNALMVVAVLIATVTFQVALSPPGGFTCDYRN--GLSGSALHNDLPVFLV 399
           KE+E+    T+NALMVV VLIATVT+Q  L PPGGF     N     G AL        +
Sbjct: 211 KELEQSSEGTKNALMVVVVLIATVTYQAILQPPGGFDAQGWNITPFQGPALMIKSLALFI 270

Query: 398 LFSIINSIGFGTSIAMITVLTRWSPLKALLRIAVLSLAATYLCCIAYI 255
            F+I+NS+GF TS+A+I +L    PLK LLR+AV S+AATY C   Y+
Sbjct: 271 PFTILNSVGFFTSVAVIILLINRFPLKKLLRLAVCSMAATYACGFLYL 318


>ref|XP_002274771.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 462

 Score =  103 bits (257), Expect = 5e-20
 Identities = 83/228 (36%), Positives = 113/228 (49%), Gaps = 23/228 (10%)
 Frame = -2

Query: 869 HLAAYRKHFQIIEVLLRT-DVFHKVVDLYKINTIGLTAGDVLR--QHGINEEIGNILT-- 705
           HLA  RK    +++LL   D+    VD+   N  G T  D+L   Q  +NE    IL   
Sbjct: 183 HLATARKQGLTMKLLLGDGDMAAAAVDVNLTNKSGFTVLDLLDVVQQIVNEPGDYILRDL 242

Query: 704 -------RVEQSTVVSLTTPLPLHRTASNT------SMDPLIILEELFKGLPMEKW---A 573
                  R  +    S      +H+ +S T      +   + ++E  F   P + W    
Sbjct: 243 LLRSGALRASELIKSSSAATPQVHQNSSITEPPQIQNQQNVFVMETSFLN-PSQLWKMSV 301

Query: 572 KEIERYPSETRNALMVVAVLIATVTFQVALSPPGGFTCDYRN--GLSGSALHNDLPVFLV 399
           KE+E+    T+NALMVV VLIATVT+Q  L PPGGF     N     G AL        +
Sbjct: 302 KELEQSSEGTKNALMVVVVLIATVTYQAILQPPGGFDAQGWNITPFQGPALMIKSLALFI 361

Query: 398 LFSIINSIGFGTSIAMITVLTRWSPLKALLRIAVLSLAATYLCCIAYI 255
            F+I+NS+GF TS+A+I +L    PLK LLR+AV S+AATY C   Y+
Sbjct: 362 PFTILNSVGFFTSVAVIILLINRFPLKKLLRLAVCSMAATYACGFLYL 409


>ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|222832582|gb|EEE71059.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
 Frame = -2

Query: 869 HLAAYRKHFQIIEVLLRT-DVFHKVVDLYKINTIGLTAGDVLRQHGINEEIGNILTRVEQ 693
           HLA+++K  ++IE+ L +       +++  IN  G+TA DV+           I+  +  
Sbjct: 181 HLASWKKQRRVIEIFLGSGSASTGSLEVNAINHTGITALDVILLFPSEAGDREIVEILRS 240

Query: 692 STVVSLTTPLPLHRTASNTSMDPLIILEELFKG----LPMEKWAKEIERYPSETRNALMV 525
           +  +     +P   T S TS D     E  +      +   K+ K+ +  PSE R  L+V
Sbjct: 241 AGAMRARDSVPSTVTNSQTSTDNPSTPERCWSNRDNLVEYFKFKKDRDS-PSEARGTLLV 299

Query: 524 VAVLIATVTFQVALSPPGGF-----TCDYRNGLSGSALH--------NDLPVFLVLFSII 384
           +AVL+AT TFQV + PPGG        D +N  S +  H            V  +LF   
Sbjct: 300 IAVLVATATFQVGVGPPGGVWQDTSIPDQKNITSNNTAHFAGQSIMATTNTVGFMLFVFF 359

Query: 383 NSIGFGTSIAMITVLTRWSPLKALLRIAVLSLAATY---LCCI 264
           NS+GF  S+ M+ VLT   PL+  L+I +L++  TY   L CI
Sbjct: 360 NSVGFSMSLYMLYVLTSKFPLQFELQICLLAMYCTYGTALSCI 402


Top