BLASTX nr result

ID: Cimicifuga21_contig00012666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012666
         (1890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549000.1| PREDICTED: ABC transporter C family member 1...    76   3e-11
ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...    76   4e-11
ref|XP_003592151.1| Multidrug resistance protein ABC transporter...    75   5e-11
ref|XP_003548999.1| PREDICTED: ABC transporter C family member 1...    75   8e-11
ref|XP_002331826.1| multidrug resistance protein ABC transporter...    73   2e-10

>ref|XP_003549000.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1481

 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 40/70 (57%), Positives = 49/70 (70%)
 Frame = -1

Query: 210  SHVTTLRLIIVYLIIGVVSALFLLVRYLCMFALGMXXXXXXXXXXXXXXFRAPMSFYDST 31
            S V+TLRLI+VY +IG +S +FLL+R L + ALG+              FRAPMSFYDST
Sbjct: 949  SQVSTLRLIVVYFLIGAISTIFLLIRTLLIVALGIQSSTNLFLLLMNSLFRAPMSFYDST 1008

Query: 30   PLGRILTRVS 1
            PLGRIL+RVS
Sbjct: 1009 PLGRILSRVS 1018


>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 41/68 (60%), Positives = 50/68 (73%)
 Frame = -1

Query: 204  VTTLRLIIVYLIIGVVSALFLLVRYLCMFALGMXXXXXXXXXXXXXXFRAPMSFYDSTPL 25
            V+TL+LI+VYL+IGV+S LFLL+R L + ALG+              FRAPMSFYDSTPL
Sbjct: 949  VSTLQLILVYLLIGVISTLFLLMRSLFVVALGLQSSKSLFSQLLNSLFRAPMSFYDSTPL 1008

Query: 24   GRILTRVS 1
            GRIL+RVS
Sbjct: 1009 GRILSRVS 1016


>ref|XP_003592151.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355481199|gb|AES62402.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1516

 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 42/68 (61%), Positives = 47/68 (69%)
 Frame = -1

Query: 204  VTTLRLIIVYLIIGVVSALFLLVRYLCMFALGMXXXXXXXXXXXXXXFRAPMSFYDSTPL 25
            VTTLRLI+VYL IGV S +FLL+R L   ALG+              FRAPMSFYDSTPL
Sbjct: 970  VTTLRLILVYLFIGVTSTIFLLMRSLFTVALGLQSSKSLFLQLLNSLFRAPMSFYDSTPL 1029

Query: 24   GRILTRVS 1
            GRIL+RVS
Sbjct: 1030 GRILSRVS 1037


>ref|XP_003548999.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1478

 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 39/69 (56%), Positives = 48/69 (69%)
 Frame = -1

Query: 207  HVTTLRLIIVYLIIGVVSALFLLVRYLCMFALGMXXXXXXXXXXXXXXFRAPMSFYDSTP 28
            +V+TL+L++VY +IGV+S +FLL+R L   ALGM              F APMSFYDSTP
Sbjct: 947  YVSTLQLVVVYFLIGVISTIFLLIRCLATVALGMKSSKKLFSQLMDSLFCAPMSFYDSTP 1006

Query: 27   LGRILTRVS 1
            LGRILTRVS
Sbjct: 1007 LGRILTRVS 1015


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 40/69 (57%), Positives = 46/69 (66%)
 Frame = -1

Query: 207  HVTTLRLIIVYLIIGVVSALFLLVRYLCMFALGMXXXXXXXXXXXXXXFRAPMSFYDSTP 28
            HV+TLRLI VYL IGV S LFLL R + +  LG+              FRAPMSFYDSTP
Sbjct: 893  HVSTLRLITVYLCIGVTSTLFLLCRSISIVVLGLQSSKSLFSQLLNSLFRAPMSFYDSTP 952

Query: 27   LGRILTRVS 1
            LGRIL+RV+
Sbjct: 953  LGRILSRVT 961


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