BLASTX nr result

ID: Cimicifuga21_contig00012659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012659
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]             117   7e-25
ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|1...   115   3e-24
ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica G...   112   3e-23
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ...   111   5e-23

>gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
          Length = 139

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/64 (89%), Positives = 62/64 (96%)
 Frame = +3

Query: 246 NLFVSGLSKRTTSEGLREAFAKFGEVIYARVVTDRNSGYSKGFGFVRYGTLEEAAEGIKG 425
           NLFVSGLSKRTT+EGLREAFAKFGEV++ARVVTDR SGYSKGFGFV+Y TLE+AAEGIKG
Sbjct: 37  NLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKG 96

Query: 426 MDGK 437
           MDGK
Sbjct: 97  MDGK 100


>ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|118487492|gb|ABK95573.1|
           unknown [Populus trichocarpa]
           gi|222857640|gb|EEE95187.1| predicted protein [Populus
           trichocarpa]
          Length = 149

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/64 (85%), Positives = 62/64 (96%)
 Frame = +3

Query: 246 NLFVSGLSKRTTSEGLREAFAKFGEVIYARVVTDRNSGYSKGFGFVRYGTLEEAAEGIKG 425
           NLFVSGLSKRTT+EGL+EAF+KFGEV+ A+VVTDR SGYSKGFGFVRYGTLE+AAEGIKG
Sbjct: 55  NLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKG 114

Query: 426 MDGK 437
           MDG+
Sbjct: 115 MDGQ 118


>ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/64 (85%), Positives = 61/64 (95%)
 Frame = +3

Query: 246 NLFVSGLSKRTTSEGLREAFAKFGEVIYARVVTDRNSGYSKGFGFVRYGTLEEAAEGIKG 425
           NLFVSGLSKRTTSEGL+EAF+KFGEV+ ARVVTDR SGYSKGFGFV+Y TLE+AAEGIKG
Sbjct: 56  NLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKG 115

Query: 426 MDGK 437
           MDG+
Sbjct: 116 MDGQ 119


>dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 111

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/73 (73%), Positives = 66/73 (90%)
 Frame = +3

Query: 246 NLFVSGLSKRTTSEGLREAFAKFGEVIYARVVTDRNSGYSKGFGFVRYGTLEEAAEGIKG 425
           NLF+SGLSKRTT++GL+EAFAKFGEVI+ARVVTDR +G+SKGFGFVRY T+E+AA+GI+G
Sbjct: 37  NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEG 96

Query: 426 MDGKVPRLLQSSF 464
           MDGKV  +L   F
Sbjct: 97  MDGKVCFILSYHF 109


>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|147854770|emb|CAN78606.1| hypothetical protein
           VITISV_024164 [Vitis vinifera]
           gi|302143178|emb|CBI20473.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +3

Query: 246 NLFVSGLSKRTTSEGLREAFAKFGEVIYARVVTDRNSGYSKGFGFVRYGTLEEAAEGIKG 425
           NLFVSGLSKRTTSEGL EAF+KFG+V+ ARVVTDR SGYSKGFGFVRY +LE+AAEGIKG
Sbjct: 42  NLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGIKG 101

Query: 426 MDGK 437
           MDGK
Sbjct: 102 MDGK 105


Top