BLASTX nr result
ID: Cimicifuga21_contig00012640
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00012640 (239 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ... 110 2e-22 ref|XP_002305536.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22 ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1... 107 8e-22 emb|CAN70291.1| hypothetical protein VITISV_019346 [Vitis vinifera] 107 8e-22 ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1... 106 2e-21 >ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis] gi|223551302|gb|EEF52788.1| tetracycline transporter, putative [Ricinus communis] Length = 442 Score = 110 bits (274), Expect = 2e-22 Identities = 50/65 (76%), Positives = 59/65 (90%) Frame = +1 Query: 1 DVTMFAICPGEDECSLAIYLSGFHQAVTGLGSLVMMPVIGNLSDVYGRKALLTLPMALTV 180 DVTM A+CPG DECSLAIYL+GF QA+ GLG+LVMMP++GNLSD YGRKALLT+PM+LTV Sbjct: 30 DVTMSALCPGRDECSLAIYLTGFQQAIIGLGTLVMMPLVGNLSDKYGRKALLTIPMSLTV 89 Query: 181 VPLCT 195 +PL T Sbjct: 90 IPLAT 94 >ref|XP_002305536.1| predicted protein [Populus trichocarpa] gi|222848500|gb|EEE86047.1| predicted protein [Populus trichocarpa] Length = 402 Score = 108 bits (269), Expect = 6e-22 Identities = 49/63 (77%), Positives = 58/63 (92%) Frame = +1 Query: 1 DVTMFAICPGEDECSLAIYLSGFHQAVTGLGSLVMMPVIGNLSDVYGRKALLTLPMALTV 180 DVTM A+CPG+DECSLAIYLSGF QA+ GLG++VMMP+IGNLSD YGRKALLTLPM L++ Sbjct: 28 DVTMVAVCPGKDECSLAIYLSGFQQAIIGLGTVVMMPLIGNLSDQYGRKALLTLPMTLSI 87 Query: 181 VPL 189 +PL Sbjct: 88 IPL 90 >ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis vinifera] gi|297744560|emb|CBI37822.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 107 bits (268), Expect = 8e-22 Identities = 51/75 (68%), Positives = 62/75 (82%) Frame = +1 Query: 1 DVTMFAICPGEDECSLAIYLSGFHQAVTGLGSLVMMPVIGNLSDVYGRKALLTLPMALTV 180 DVTM A+CPG+DECSLAIYLSGF QA+ GLG++VM PVIGNLSD YGRKALLT+PMAL++ Sbjct: 30 DVTMSALCPGKDECSLAIYLSGFQQAIIGLGTVVMTPVIGNLSDEYGRKALLTIPMALSI 89 Query: 181 VPLCT*NSLKQTVAF 225 +PL + T +F Sbjct: 90 IPLAILAYSRTTTSF 104 >emb|CAN70291.1| hypothetical protein VITISV_019346 [Vitis vinifera] Length = 494 Score = 107 bits (268), Expect = 8e-22 Identities = 51/75 (68%), Positives = 62/75 (82%) Frame = +1 Query: 1 DVTMFAICPGEDECSLAIYLSGFHQAVTGLGSLVMMPVIGNLSDVYGRKALLTLPMALTV 180 DVTM A+CPG+DECSLAIYLSGF QA+ GLG++VM PVIGNLSD YGRKALLT+PMAL++ Sbjct: 30 DVTMSALCPGKDECSLAIYLSGFQQAIIGLGTVVMTPVIGNLSDEYGRKALLTIPMALSI 89 Query: 181 VPLCT*NSLKQTVAF 225 +PL + T +F Sbjct: 90 IPLAILAYSRTTTSF 104 >ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis vinifera] gi|302141709|emb|CBI18912.3| unnamed protein product [Vitis vinifera] Length = 442 Score = 106 bits (264), Expect = 2e-21 Identities = 46/63 (73%), Positives = 57/63 (90%) Frame = +1 Query: 1 DVTMFAICPGEDECSLAIYLSGFHQAVTGLGSLVMMPVIGNLSDVYGRKALLTLPMALTV 180 DVTM A+CPG DECS+AIYL+GF Q + GLG+LVMMP++GNLSD+YGRKALLT+PM LT+ Sbjct: 30 DVTMAALCPGRDECSIAIYLTGFQQVIIGLGTLVMMPLVGNLSDMYGRKALLTIPMCLTI 89 Query: 181 VPL 189 +PL Sbjct: 90 IPL 92