BLASTX nr result

ID: Cimicifuga21_contig00012633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012633
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18046.3| unnamed protein product [Vitis vinifera]              383   e-104
ref|XP_002308249.1| predicted protein [Populus trichocarpa] gi|2...   357   4e-96
ref|XP_002267193.1| PREDICTED: uncharacterized protein LOC100260...   332   9e-89
ref|XP_002532866.1| conserved hypothetical protein [Ricinus comm...   329   8e-88
ref|XP_002323068.1| predicted protein [Populus trichocarpa] gi|2...   327   3e-87

>emb|CBI18046.3| unnamed protein product [Vitis vinifera]
          Length = 623

 Score =  383 bits (984), Expect = e-104
 Identities = 186/256 (72%), Positives = 217/256 (84%)
 Frame = +1

Query: 487  HTVVSSVQALGRGFDVNFDTRLLYCKGVAGACIVQVDEEHPRELLACDGMVVPNVSRDIK 666
            HT ++SVQALGRGFDVNFDTRLLYCKG AG+ +V+VDEEH ++L   D ++VPNVSRDIK
Sbjct: 49   HTALNSVQALGRGFDVNFDTRLLYCKGGAGSRVVEVDEEHTKDLCLYDNLLVPNVSRDIK 108

Query: 667  FSQETMGRESSGICSFQEMVGYFNKKADVLGNVPLGSFNSAFSFTGSKKTDAAATKSLSL 846
             SQET GRE SG+ SF EMV YFNKKA++ GNVPLGSFN+AFSFTG K  D+A TKSL +
Sbjct: 109  NSQETKGREISGVLSFPEMVEYFNKKANLSGNVPLGSFNAAFSFTGLKHMDSATTKSLYM 168

Query: 847  DGFFVPLCKVQLIKNPSVLQENVKQAIPSSWDPSALARFIESFGTHVITSITIGGKDVIY 1026
            D FF+ L KVQL+ +P VLQENVK+A+PS WDP +LA FIE+FGTHVITS+TIGGKDVIY
Sbjct: 169  DAFFISLAKVQLVNSPLVLQENVKRAVPSCWDPPSLASFIENFGTHVITSVTIGGKDVIY 228

Query: 1027 VKQHNSSPLSAMEIKNYVQDIGDQRFTNTENDMSSGPMKFSDKAADPCLFTNQGVYPHPH 1206
            VKQH SSPLS MEIKNYVQDIG+QRF++TE++ SSGPMK  DK+ DPCLF +QG+YP P 
Sbjct: 229  VKQHQSSPLSTMEIKNYVQDIGNQRFSDTESNASSGPMKLKDKSVDPCLFNSQGIYPQPT 288

Query: 1207 SATYLTGKEDVTVIFR 1254
            SA  LTGKEDVTVIFR
Sbjct: 289  SAPILTGKEDVTVIFR 304


>ref|XP_002308249.1| predicted protein [Populus trichocarpa] gi|222854225|gb|EEE91772.1|
            predicted protein [Populus trichocarpa]
          Length = 597

 Score =  357 bits (916), Expect = 4e-96
 Identities = 175/277 (63%), Positives = 217/277 (78%), Gaps = 10/277 (3%)
 Frame = +1

Query: 451  MEENXXXXXXXFHTVVSSVQALGRGFDVNFDTRLLYCKGVAGACIVQVDEEHPRELLACD 630
            M E         HT +++VQALGRGFDVN+DTRLLYCKGV G+ +V++D+EH R+LL C 
Sbjct: 1    MGEGVSVNAAAMHTAMNAVQALGRGFDVNYDTRLLYCKGVTGSKVVEIDQEHARDLLLCG 60

Query: 631  GMVVPNVSRDIKFSQETMGRESSGICSFQEMVGYFNKKADVLGNVPLGSFNSAFSFTGSK 810
            G VVPNVSRDIK S   +GR+SSG+ +FQEMV YFN+KA++ G +PLG FNSAFSFTGSK
Sbjct: 61   GFVVPNVSRDIKNSLVPIGRQSSGVRTFQEMVEYFNQKANLSGGLPLGCFNSAFSFTGSK 120

Query: 811  KTDAAATKSLSLDGFFVPLCKVQLIKNPSVLQENVKQAIPSSWDPSALARFIESFGTHVI 990
              DAA +K+LS+DG+++PL KVQL+++P VL ENVK+A+P+ WDP +LA FIE+FGTHVI
Sbjct: 121  HIDAAVSKTLSMDGYYIPLAKVQLMRSPLVLHENVKRAVPTCWDPPSLASFIENFGTHVI 180

Query: 991  TSITIGGKDVIYVKQHNSSPLSAMEIKNYVQDIGDQRFTNTENDMSSGPMKFSDKAA--- 1161
            TS+TIGGKDVIYVKQH SSPLS +EIK+YVQDIG+QRF++ E   SSGPMK  DKA+   
Sbjct: 181  TSVTIGGKDVIYVKQHQSSPLSTLEIKHYVQDIGNQRFSDMEGHTSSGPMKLKDKASPRI 240

Query: 1162 -------DPCLFTNQGVYPHPHSATYLTGKEDVTVIF 1251
                   D  +F +QG+YP P SA YLTGKE VTVIF
Sbjct: 241  FPYFFGGDSGIFNSQGIYPQPTSAPYLTGKEHVTVIF 277


>ref|XP_002267193.1| PREDICTED: uncharacterized protein LOC100260206 [Vitis vinifera]
          Length = 615

 Score =  332 bits (852), Expect = 9e-89
 Identities = 162/223 (72%), Positives = 190/223 (85%)
 Frame = +1

Query: 487  HTVVSSVQALGRGFDVNFDTRLLYCKGVAGACIVQVDEEHPRELLACDGMVVPNVSRDIK 666
            HT ++SVQALGRGFDVNFDTRLLYCKG AG+ +V+VDEEH ++L   D ++VPNVSRDIK
Sbjct: 67   HTALNSVQALGRGFDVNFDTRLLYCKGGAGSRVVEVDEEHTKDLCLYDNLLVPNVSRDIK 126

Query: 667  FSQETMGRESSGICSFQEMVGYFNKKADVLGNVPLGSFNSAFSFTGSKKTDAAATKSLSL 846
             SQET GRE SG+ SF EMV YFNKKA++ GNVPLGSFN+AFSFTG K  D+A TKSL +
Sbjct: 127  NSQETKGREISGVLSFPEMVEYFNKKANLSGNVPLGSFNAAFSFTGLKHMDSATTKSLYM 186

Query: 847  DGFFVPLCKVQLIKNPSVLQENVKQAIPSSWDPSALARFIESFGTHVITSITIGGKDVIY 1026
            D FF+ L KVQL+ +P VLQENVK+A+PS WDP +LA FIE+FGTHVITS+TIGGKDVIY
Sbjct: 187  DAFFISLAKVQLVNSPLVLQENVKRAVPSCWDPPSLASFIENFGTHVITSVTIGGKDVIY 246

Query: 1027 VKQHNSSPLSAMEIKNYVQDIGDQRFTNTENDMSSGPMKFSDK 1155
            VKQH SSPLS MEIKNYVQDIG+QRF++TE++ SSGPMK  DK
Sbjct: 247  VKQHQSSPLSTMEIKNYVQDIGNQRFSDTESNASSGPMKLKDK 289


>ref|XP_002532866.1| conserved hypothetical protein [Ricinus communis]
            gi|223527378|gb|EEF29520.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 563

 Score =  329 bits (844), Expect = 8e-88
 Identities = 159/224 (70%), Positives = 192/224 (85%)
 Frame = +1

Query: 487  HTVVSSVQALGRGFDVNFDTRLLYCKGVAGACIVQVDEEHPRELLACDGMVVPNVSRDIK 666
            HT ++SVQALGRGFDVNFDTRLLYCKGV G+ +VQ+DEEH R L   D + +PN+SRDI 
Sbjct: 17   HTAMNSVQALGRGFDVNFDTRLLYCKGVTGSRVVQIDEEHTRNLYLYDEIELPNISRDIN 76

Query: 667  FSQETMGRESSGICSFQEMVGYFNKKADVLGNVPLGSFNSAFSFTGSKKTDAAATKSLSL 846
             S ++ GR+S G+C+F EMV YFN KA+V G+ PLGSFNSAFSFTGSK  DA+ TK+LSL
Sbjct: 77   KSLDSQGRQSYGVCTFFEMVEYFNHKANVPGHCPLGSFNSAFSFTGSKHIDASTTKTLSL 136

Query: 847  DGFFVPLCKVQLIKNPSVLQENVKQAIPSSWDPSALARFIESFGTHVITSITIGGKDVIY 1026
            DGF++PL KVQL+K+P VLQE+VK+A+P+SWDPS+LARFIE+FGTHVITS+TIGGKD+IY
Sbjct: 137  DGFYIPLAKVQLMKSPLVLQEHVKRAVPTSWDPSSLARFIENFGTHVITSVTIGGKDMIY 196

Query: 1027 VKQHNSSPLSAMEIKNYVQDIGDQRFTNTENDMSSGPMKFSDKA 1158
            VKQH SSPLS MEIKNYVQDIG+QRF +TE+  SSGPM+  DKA
Sbjct: 197  VKQHQSSPLSTMEIKNYVQDIGNQRFCDTESHTSSGPMRPKDKA 240


>ref|XP_002323068.1| predicted protein [Populus trichocarpa] gi|222867698|gb|EEF04829.1|
            predicted protein [Populus trichocarpa]
          Length = 560

 Score =  327 bits (839), Expect = 3e-87
 Identities = 163/256 (63%), Positives = 204/256 (79%)
 Frame = +1

Query: 487  HTVVSSVQALGRGFDVNFDTRLLYCKGVAGACIVQVDEEHPRELLACDGMVVPNVSRDIK 666
            HT +++VQALGRGFDVN+D RLLYCKGVAG+ +V++D EH R+LL   G+++PNVSRDI+
Sbjct: 2    HTAMNAVQALGRGFDVNYDKRLLYCKGVAGSKVVEIDGEHTRDLLLAGGILLPNVSRDIR 61

Query: 667  FSQETMGRESSGICSFQEMVGYFNKKADVLGNVPLGSFNSAFSFTGSKKTDAAATKSLSL 846
             S + +GR+SSG+C+F EMV YFN+KA++ G +PLGSFNSAFSFTGSK  DAAATK+LS+
Sbjct: 62   SSLDPIGRQSSGVCTFHEMVEYFNQKANLSGGLPLGSFNSAFSFTGSKHIDAAATKTLSM 121

Query: 847  DGFFVPLCKVQLIKNPSVLQENVKQAIPSSWDPSALARFIESFGTHVITSITIGGKDVIY 1026
            DG+++PL KVQL ++P VL ENV +A+P+ WDP +LA FIE+FGTHVITS+TIGGKDVIY
Sbjct: 122  DGYYIPLAKVQLKRSPLVLHENVIRAVPTFWDPPSLASFIENFGTHVITSVTIGGKDVIY 181

Query: 1027 VKQHNSSPLSAMEIKNYVQDIGDQRFTNTENDMSSGPMKFSDKAADPCLFTNQGVYPHPH 1206
            VKQH SSPLS MEIK+YVQDIG+QRF++TE  MSSGPMK  DKA+             P 
Sbjct: 182  VKQHQSSPLSTMEIKHYVQDIGNQRFSDTEGHMSSGPMKLKDKAS-------------PM 228

Query: 1207 SATYLTGKEDVTVIFR 1254
             + Y     DVTVIFR
Sbjct: 229  ISPYFF---DVTVIFR 241


Top