BLASTX nr result

ID: Cimicifuga21_contig00012612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012612
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261...   145   2e-32
emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]   144   3e-32
ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm...   140   5e-31
ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2...   140   5e-31
ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|2...   127   6e-27

>ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261343 [Vitis vinifera]
          Length = 223

 Score =  145 bits (365), Expect = 2e-32
 Identities = 72/119 (60%), Positives = 85/119 (71%)
 Frame = +3

Query: 390 FATIFASQRFFFSSPGRXXXXXXXXXXTDLVEPDTLVSGGIAVRTYSPDPYFDFRRSMVE 569
           FAT+FASQRFFFSSPGR              E D++V+GG+AV TYSP+PY DFRRSM E
Sbjct: 94  FATVFASQRFFFSSPGRSNSIFEASESPP--ESDSIVNGGVAVHTYSPNPYEDFRRSMQE 151

Query: 570 MVEAKELFDVKGDWDGLHELLLCYLALNPKHTHKYIVAAFTDVLITLASSASDHSLRKS 746
           M EA+EL DV  DWD LHELLLCYL LNPKHTHK+I+ AF D+++ L SS +    R S
Sbjct: 152 MAEARELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSSTASDGRRGS 210


>emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]
          Length = 428

 Score =  144 bits (364), Expect = 3e-32
 Identities = 72/119 (60%), Positives = 84/119 (70%)
 Frame = +3

Query: 390 FATIFASQRFFFSSPGRXXXXXXXXXXTDLVEPDTLVSGGIAVRTYSPDPYFDFRRSMVE 569
           FAT+FASQRFFFSSPGR              E D +V+GG+AV TYSP+PY DFRRSM E
Sbjct: 94  FATVFASQRFFFSSPGRSNSIFEASESPP--ESDAIVNGGVAVHTYSPNPYEDFRRSMQE 151

Query: 570 MVEAKELFDVKGDWDGLHELLLCYLALNPKHTHKYIVAAFTDVLITLASSASDHSLRKS 746
           M EA+EL DV  DWD LHELLLCYL LNPKHTHK+I+ AF D+++ L SS +    R S
Sbjct: 152 MAEARELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSSTASDGRRGS 210


>ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis]
           gi|223543765|gb|EEF45293.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  140 bits (353), Expect = 5e-31
 Identities = 69/115 (60%), Positives = 85/115 (73%)
 Frame = +3

Query: 390 FATIFASQRFFFSSPGRXXXXXXXXXXTDLVEPDTLVSGGIAVRTYSPDPYFDFRRSMVE 569
           FA IFASQRFFFSSPGR          T   EP T ++GG+AV+ YSPDPY DFR+SM+E
Sbjct: 96  FAAIFASQRFFFSSPGRSNSIIESPE-TPSAEPQTPLNGGVAVKKYSPDPYADFRQSMLE 154

Query: 570 MVEAKELFDVKGDWDGLHELLLCYLALNPKHTHKYIVAAFTDVLITLASSASDHS 734
           M+EA++  DVK DWD LHELL CYL LNPK THK+I++AF D++I L +S+S  S
Sbjct: 155 MIEARKPRDVKADWDYLHELLSCYLNLNPKQTHKFIISAFADIVICLLTSSSSES 209


>ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  140 bits (353), Expect = 5e-31
 Identities = 69/115 (60%), Positives = 82/115 (71%)
 Frame = +3

Query: 390 FATIFASQRFFFSSPGRXXXXXXXXXXTDLVEPDTLVSGGIAVRTYSPDPYFDFRRSMVE 569
           FATI ASQR FFSSPGR            L EP T VSGG+A++ YSPDPY DF+ SM E
Sbjct: 91  FATILASQRLFFSSPGRSNSIIE-----SLPEPQTPVSGGVAIKKYSPDPYTDFKHSMQE 145

Query: 570 MVEAKELFDVKGDWDGLHELLLCYLALNPKHTHKYIVAAFTDVLITLASSASDHS 734
           M+EA+EL DV+  WD LHELL CYL LNPKHTHK+I++AF D+++ L SS S  S
Sbjct: 146 MIEARELRDVRAKWDYLHELLSCYLKLNPKHTHKFIISAFADIVVCLLSSPSQES 200


>ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|222863737|gb|EEF00868.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  127 bits (318), Expect = 6e-27
 Identities = 62/112 (55%), Positives = 80/112 (71%)
 Frame = +3

Query: 390 FATIFASQRFFFSSPGRXXXXXXXXXXTDLVEPDTLVSGGIAVRTYSPDPYFDFRRSMVE 569
           FATI ASQRFF SSPGR            + E  T VSGG+A++ YS DPY DF+ SM E
Sbjct: 90  FATIIASQRFFSSSPGRSNSIIE-----SMQELHTPVSGGVAIKKYSLDPYIDFKNSMQE 144

Query: 570 MVEAKELFDVKGDWDGLHELLLCYLALNPKHTHKYIVAAFTDVLITLASSAS 725
           M+EA+E+ DV+ +WD LHEL+ CYL LNPK+THK+I++AF D+++ L SS S
Sbjct: 145 MIEAREIRDVRANWDYLHELISCYLKLNPKNTHKFIISAFADIIVCLLSSPS 196


Top