BLASTX nr result

ID: Cimicifuga21_contig00012605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012605
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34939.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   109   3e-22
ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, pu...    96   3e-18
ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot...    95   7e-18
ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cu...    95   7e-18

>emb|CBI34939.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/121 (47%), Positives = 78/121 (64%)
 Frame = -2

Query: 566 TSEDKYFICMETSNRNFTSWQEGGVLLSLHEKALADDIIIGLLQACYIRMILLEKNKRWE 387
           +SED YFICME   R  T  ++ G+LL L E A   D+I GLLQACY+R  LL    RW+
Sbjct: 438 SSEDFYFICMEACRR-LTRPEQQGILLCLREGASTTDVISGLLQACYVRKKLLLNRTRWK 496

Query: 386 HILDANDVSESVLREWCELVDDSNLCAQRVVGALRKEFKSSAWAYENILLSAQEQVGYEF 207
           +I++  D S++ +REW ++V+DS   AQR +  L +E     W  +NILLSA+EQV Y F
Sbjct: 497 NIVEDCDTSDTFVREWFKVVEDSKQSAQRDLNLLNEEMLRLGWTVKNILLSAEEQVKYRF 556

Query: 206 L 204
           +
Sbjct: 557 V 557


>ref|XP_002278851.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
          Length = 514

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/121 (47%), Positives = 78/121 (64%)
 Frame = -2

Query: 566 TSEDKYFICMETSNRNFTSWQEGGVLLSLHEKALADDIIIGLLQACYIRMILLEKNKRWE 387
           +SED YFICME   R  T  ++ G+LL L E A   D+I GLLQACY+R  LL    RW+
Sbjct: 393 SSEDFYFICMEACRR-LTRPEQQGILLCLREGASTTDVISGLLQACYVRKKLLLNRTRWK 451

Query: 386 HILDANDVSESVLREWCELVDDSNLCAQRVVGALRKEFKSSAWAYENILLSAQEQVGYEF 207
           +I++  D S++ +REW ++V+DS   AQR +  L +E     W  +NILLSA+EQV Y F
Sbjct: 452 NIVEDCDTSDTFVREWFKVVEDSKQSAQRDLNLLNEEMLRLGWTVKNILLSAEEQVKYRF 511

Query: 206 L 204
           +
Sbjct: 512 V 512


>ref|XP_002522371.1| mRNA, complete cds, clone: rafl24-09-C04, putative [Ricinus
           communis] gi|223538449|gb|EEF40055.1| mRNA, complete
           cds, clone: rafl24-09-C04, putative [Ricinus communis]
          Length = 523

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 54/121 (44%), Positives = 75/121 (61%)
 Frame = -2

Query: 566 TSEDKYFICMETSNRNFTSWQEGGVLLSLHEKALADDIIIGLLQACYIRMILLEKNKRWE 387
           +SED YFIC+E S R  T  ++ G+LLSL E A   D+I+GLLQACYIR  LL    RWE
Sbjct: 406 SSEDYYFICVENSYRGLTRTKQQGILLSLREGAGTADVIMGLLQACYIRKALL--FSRWE 463

Query: 386 HILDANDVSESVLREWCELVDDSNLCAQRVVGALRKEFKSSAWAYENILLSAQEQVGYEF 207
            I   +D   +V +E  +L++DS   A++ +  L  +  +  WA +NILLS +EQ  Y F
Sbjct: 464 TI---SDPGSTVHKECIKLIEDSKQSAEKDLSMLGDQMTALGWAVKNILLSTEEQTRYSF 520

Query: 206 L 204
           +
Sbjct: 521 V 521


>ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58-like
           [Cucumis sativus]
          Length = 523

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = -2

Query: 563 SEDKYFICMETSNRNFTSWQEGGVLLSLHEKALADDIIIGLLQACYIRMILLEKNKRWEH 384
           S+D YFICM+   R  T+    G+LL L E A A DI IGLLQAC+IR  ++   + WE 
Sbjct: 401 SKDYYFICMDAFFRGSTT-NTHGILLCLREGARATDICIGLLQACFIRKTIVSNTRIWEE 459

Query: 383 -ILDANDVSESVLREWCELVDDSNLCAQRVVGALRKEFKSSAWAYENILLSAQEQVGYEF 207
            ++  N+VS+++ +EW  LV+DS   A+     + ++  S  WA +N+LLS  EQ+ Y F
Sbjct: 460 KMVKGNEVSDAIAKEWINLVEDSKKYAEENGCFVLQQMSSLGWAVKNVLLSTNEQIRYSF 519

Query: 206 L 204
           +
Sbjct: 520 V 520


>ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cucumis sativus]
          Length = 523

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = -2

Query: 563 SEDKYFICMETSNRNFTSWQEGGVLLSLHEKALADDIIIGLLQACYIRMILLEKNKRWEH 384
           S+D YFICM+   R  T+    G+LL L E A A DI IGLLQAC+IR  ++   + WE 
Sbjct: 401 SKDYYFICMDAFFRGSTT-NTHGILLCLREGARATDICIGLLQACFIRKTIVSNTRIWEE 459

Query: 383 -ILDANDVSESVLREWCELVDDSNLCAQRVVGALRKEFKSSAWAYENILLSAQEQVGYEF 207
            ++  N+VS+++ +EW  LV+DS   A+     + ++  S  WA +N+LLS  EQ+ Y F
Sbjct: 460 KMVKGNEVSDAIAKEWINLVEDSKKYAEENGCFVLQQMSSLGWAVKNVLLSTNEQIRYSF 519

Query: 206 L 204
           +
Sbjct: 520 V 520


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