BLASTX nr result

ID: Cimicifuga21_contig00012588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012588
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632127.1| PREDICTED: uncharacterized protein LOC100251...   104   1e-20
emb|CBI15878.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_003632128.1| PREDICTED: uncharacterized protein LOC100251...   102   8e-20
ref|XP_003599302.1| hypothetical protein MTR_3g031370 [Medicago ...    96   6e-18
gb|AAF82217.1|AC067971_25 Strong similarity to a mitochondrial c...    93   4e-17

>ref|XP_003632127.1| PREDICTED: uncharacterized protein LOC100251809 isoform 1 [Vitis
           vinifera]
          Length = 170

 Score =  104 bits (260), Expect = 1e-20
 Identities = 67/153 (43%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
 Frame = -1

Query: 620 MSISSNNFVQENAD-SDSEANTDDDATDYYQPISGVXXXXXXXXXXXDNHRNE---SNGH 453
           MS  + +F++ N   SDS+ N++D + +YYQPIS V            +  +E   S+ H
Sbjct: 4   MSNPTTDFMEGNGGGSDSDTNSED-SPEYYQPISAVDSDGEASDQVNSDEDHEEHASDFH 62

Query: 452 HLFN--CRPSSESPVSNGGIDLNLNXXXXXXXXXXXXXXXXAIWRAFTEDESRRNAPLPP 279
            L N  C   +E+ VS+  ++LN +                AI RAF EDESRRNAPL P
Sbjct: 63  RLPNGYCGHVAENGVSS--LNLNDDVEEEHEEERMRETSDSAIRRAFREDESRRNAPLTP 120

Query: 278 ENATRIMDAMRGISFGGSAPDWAHQLPEDRWID 180
           ENA ++M+AMRG+SFGG APDWA  +PEDRWID
Sbjct: 121 ENAMQVMEAMRGVSFGGLAPDWAGHVPEDRWID 153


>emb|CBI15878.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  104 bits (260), Expect = 1e-20
 Identities = 67/153 (43%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
 Frame = -1

Query: 620 MSISSNNFVQENAD-SDSEANTDDDATDYYQPISGVXXXXXXXXXXXDNHRNE---SNGH 453
           MS  + +F++ N   SDS+ N++D + +YYQPIS V            +  +E   S+ H
Sbjct: 1   MSNPTTDFMEGNGGGSDSDTNSED-SPEYYQPISAVDSDGEASDQVNSDEDHEEHASDFH 59

Query: 452 HLFN--CRPSSESPVSNGGIDLNLNXXXXXXXXXXXXXXXXAIWRAFTEDESRRNAPLPP 279
            L N  C   +E+ VS+  ++LN +                AI RAF EDESRRNAPL P
Sbjct: 60  RLPNGYCGHVAENGVSS--LNLNDDVEEEHEEERMRETSDSAIRRAFREDESRRNAPLTP 117

Query: 278 ENATRIMDAMRGISFGGSAPDWAHQLPEDRWID 180
           ENA ++M+AMRG+SFGG APDWA  +PEDRWID
Sbjct: 118 ENAMQVMEAMRGVSFGGLAPDWAGHVPEDRWID 150


>ref|XP_003632128.1| PREDICTED: uncharacterized protein LOC100251809 isoform 2 [Vitis
           vinifera]
          Length = 159

 Score =  102 bits (253), Expect = 8e-20
 Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 5/138 (3%)
 Frame = -1

Query: 578 SDSEANTDDDATDYYQPISGVXXXXXXXXXXXDNHRNE---SNGHHLFN--CRPSSESPV 414
           SDS+ N++D + +YYQPIS V            +  +E   S+ H L N  C   +E+ V
Sbjct: 8   SDSDTNSED-SPEYYQPISAVDSDGEASDQVNSDEDHEEHASDFHRLPNGYCGHVAENGV 66

Query: 413 SNGGIDLNLNXXXXXXXXXXXXXXXXAIWRAFTEDESRRNAPLPPENATRIMDAMRGISF 234
           S+  ++LN +                AI RAF EDESRRNAPL PENA ++M+AMRG+SF
Sbjct: 67  SS--LNLNDDVEEEHEEERMRETSDSAIRRAFREDESRRNAPLTPENAMQVMEAMRGVSF 124

Query: 233 GGSAPDWAHQLPEDRWID 180
           GG APDWA  +PEDRWID
Sbjct: 125 GGLAPDWAGHVPEDRWID 142


>ref|XP_003599302.1| hypothetical protein MTR_3g031370 [Medicago truncatula]
           gi|355488350|gb|AES69553.1| hypothetical protein
           MTR_3g031370 [Medicago truncatula]
          Length = 151

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
 Frame = -1

Query: 620 MSISSNNFVQENAD-SDSEANTDDDATDYYQPISGVXXXXXXXXXXXDNHRNESNGHHLF 444
           M+ ++   ++EN + SDS+ N+DD AT+YYQPIS V           ++     NG+   
Sbjct: 1   MNSATVESIEENGNGSDSDVNSDD-ATEYYQPISAVDDDGSSDGENANDFHQIPNGY--- 56

Query: 443 NCRPSSESPVSNGGIDLNLNXXXXXXXXXXXXXXXXAIWRAFTEDESRRNAPLPPENATR 264
               ++     NG   L+LN                 I RA  E+E RR APL  ENATR
Sbjct: 57  ----TAHGGAENGISMLDLNDDEEEEEERSGEEVENEIQRALREEERRRIAPLTAENATR 112

Query: 263 IMDAMRGISFGGSAPDWAHQLPEDRWID 180
           +M+AMRGISF G AP W  ++PE+RWID
Sbjct: 113 VMEAMRGISFAGEAPRWVSEVPEERWID 140


>gb|AAF82217.1|AC067971_25 Strong similarity to a mitochondrial carrier protein from Ribes
            nigrum gb|AJ007580. It contains a mitochondrial carrier
            protein domain PF|00153. ESTs gb|T46775, gb|R90539,
            gb|AW029646 and gb|AA605443 come from this gene
            [Arabidopsis thaliana]
          Length = 781

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 61/153 (39%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
 Frame = -1

Query: 626  IDMSISSNNFVQENADSDSEANTDDDATDYYQPISGVXXXXXXXXXXXD----NHRNESN 459
            I+ S+  NN    NA SDS++N+ +D+ DYY+PIS V                     SN
Sbjct: 631  IEGSMEENN----NAGSDSDSNSVEDSQDYYEPISAVDLYNSNDDEEDSYLPIGGDGLSN 686

Query: 458  GHHLFNCRPSSESPVSNGGIDLNLNXXXXXXXXXXXXXXXXAIWRAFTEDESRRNAPLPP 279
            GH +    P +E  +S+  I+ N +                 I RAF EDE RR +PL  
Sbjct: 687  GHCMI---PDAEVGISSISINDNTDSEEETETETGPE-----IRRAFEEDERRRRSPLVE 738

Query: 278  ENATRIMDAMRGISFGGSAPDWAHQLPEDRWID 180
            ENA R+M+AMR ISF G+APDWA  + EDRWID
Sbjct: 739  ENAVRVMEAMRAISFPGTAPDWASDVNEDRWID 771


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