BLASTX nr result

ID: Cimicifuga21_contig00012587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012587
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515183.1| NEFA-interacting nuclear protein NIP30, puta...   210   3e-52
ref|XP_002281434.1| PREDICTED: uncharacterized protein LOC100265...   202   5e-50
ref|XP_003520773.1| PREDICTED: uncharacterized protein LOC100803...   200   3e-49
ref|XP_002320259.1| predicted protein [Populus trichocarpa] gi|2...   199   4e-49
emb|CBI37061.3| unnamed protein product [Vitis vinifera]              197   2e-48

>ref|XP_002515183.1| NEFA-interacting nuclear protein NIP30, putative [Ricinus communis]
           gi|223545663|gb|EEF47167.1| NEFA-interacting nuclear
           protein NIP30, putative [Ricinus communis]
          Length = 208

 Score =  210 bits (534), Expect = 3e-52
 Identities = 101/126 (80%), Positives = 118/126 (93%)
 Frame = -1

Query: 692 EESGAAPIRLMSFVSEEQLDEAKRNRGERVEDGTAQRDKPLFEILKANKDKKDAEFNERF 513
           EE  + PI+LM+FVSEEQLDEAK++RGERVEDGTAQRD+PL+EILK NKDKKDAEFNERF
Sbjct: 2   EEGSSRPIKLMNFVSEEQLDEAKKSRGERVEDGTAQRDRPLYEILKENKDKKDAEFNERF 61

Query: 512 KHRPPKALDEDETEFLDNLEMSRKEYERQVADEEALELQSFQAAVAAQTSVVYELKETPP 333
           KHRPPKALDEDETEFLD LEMSR+EYE+QVADEEA +L+SFQAAVAAQ+++++ELKETPP
Sbjct: 62  KHRPPKALDEDETEFLDKLEMSRREYEQQVADEEAQQLRSFQAAVAAQSTILHELKETPP 121

Query: 332 VPKFEE 315
           VP  +E
Sbjct: 122 VPVVQE 127


>ref|XP_002281434.1| PREDICTED: uncharacterized protein LOC100265766 [Vitis vinifera]
          Length = 212

 Score =  202 bits (515), Expect = 5e-50
 Identities = 95/126 (75%), Positives = 116/126 (92%)
 Frame = -1

Query: 692 EESGAAPIRLMSFVSEEQLDEAKRNRGERVEDGTAQRDKPLFEILKANKDKKDAEFNERF 513
           E S   P+RLM+F+SEEQLDE+K+ RGER +DGTAQRD+PLFEILK NKDK+DAEFNERF
Sbjct: 4   ETSSLPPMRLMNFISEEQLDESKKARGERADDGTAQRDRPLFEILKENKDKRDAEFNERF 63

Query: 512 KHRPPKALDEDETEFLDNLEMSRKEYERQVADEEALELQSFQAAVAAQTSVVYELKETPP 333
           KHRPPKALDEDETEFLDNLEMSR++YE+Q+A+EEA +L+SFQAAVAAQ+++V+ELK+TPP
Sbjct: 64  KHRPPKALDEDETEFLDNLEMSRRDYEQQMAEEEAQQLRSFQAAVAAQSTIVHELKDTPP 123

Query: 332 VPKFEE 315
            PK +E
Sbjct: 124 APKVQE 129


>ref|XP_003520773.1| PREDICTED: uncharacterized protein LOC100803069 [Glycine max]
          Length = 210

 Score =  200 bits (508), Expect = 3e-49
 Identities = 96/126 (76%), Positives = 113/126 (89%)
 Frame = -1

Query: 692 EESGAAPIRLMSFVSEEQLDEAKRNRGERVEDGTAQRDKPLFEILKANKDKKDAEFNERF 513
           +E    PIR+M+FVSE+QL EAK+ RGERVEDGTAQRD+PL+EILK NKDKKDAEFNERF
Sbjct: 2   DEDSDRPIRIMNFVSEDQLVEAKKTRGERVEDGTAQRDRPLYEILKENKDKKDAEFNERF 61

Query: 512 KHRPPKALDEDETEFLDNLEMSRKEYERQVADEEALELQSFQAAVAAQTSVVYELKETPP 333
           KHRPPKALDEDETEFLDN E +R+EYERQVADEEAL++QSFQAAV AQ++VV+E+KE PP
Sbjct: 62  KHRPPKALDEDETEFLDNYETTRREYERQVADEEALQIQSFQAAVEAQSNVVHEVKENPP 121

Query: 332 VPKFEE 315
           +P  +E
Sbjct: 122 LPVVQE 127


>ref|XP_002320259.1| predicted protein [Populus trichocarpa] gi|222861032|gb|EEE98574.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  199 bits (507), Expect = 4e-49
 Identities = 100/126 (79%), Positives = 112/126 (88%)
 Frame = -1

Query: 692 EESGAAPIRLMSFVSEEQLDEAKRNRGERVEDGTAQRDKPLFEILKANKDKKDAEFNERF 513
           EE    P+RLM+FVSEEQLDEAK++RGERVEDGTAQRD+PLFEILK NKDKKDAEFNER 
Sbjct: 2   EEELRLPVRLMNFVSEEQLDEAKKSRGERVEDGTAQRDRPLFEILKENKDKKDAEFNERL 61

Query: 512 KHRPPKALDEDETEFLDNLEMSRKEYERQVADEEALELQSFQAAVAAQTSVVYELKETPP 333
           KHRPPKALDEDETEFLDNLEMS+KEYE+Q+ADEEA +L+SFQAAVAAQ+  V +LKETP 
Sbjct: 62  KHRPPKALDEDETEFLDNLEMSKKEYEQQIADEEARQLRSFQAAVAAQSFSVDDLKETPL 121

Query: 332 VPKFEE 315
           VP   E
Sbjct: 122 VPPVPE 127


>emb|CBI37061.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  197 bits (502), Expect = 2e-48
 Identities = 92/119 (77%), Positives = 113/119 (94%)
 Frame = -1

Query: 671 IRLMSFVSEEQLDEAKRNRGERVEDGTAQRDKPLFEILKANKDKKDAEFNERFKHRPPKA 492
           +RLM+F+SEEQLDE+K+ RGER +DGTAQRD+PLFEILK NKDK+DAEFNERFKHRPPKA
Sbjct: 1   MRLMNFISEEQLDESKKARGERADDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKA 60

Query: 491 LDEDETEFLDNLEMSRKEYERQVADEEALELQSFQAAVAAQTSVVYELKETPPVPKFEE 315
           LDEDETEFLDNLEMSR++YE+Q+A+EEA +L+SFQAAVAAQ+++V+ELK+TPP PK +E
Sbjct: 61  LDEDETEFLDNLEMSRRDYEQQMAEEEAQQLRSFQAAVAAQSTIVHELKDTPPAPKVQE 119


Top