BLASTX nr result

ID: Cimicifuga21_contig00012568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012568
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279072.1| PREDICTED: peroxisome biogenesis protein 2 [...   529   e-148
ref|XP_002304212.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
ref|XP_003530139.1| PREDICTED: peroxisome biogenesis protein 2-l...   514   e-143
ref|XP_003530138.1| PREDICTED: peroxisome biogenesis protein 2-l...   514   e-143
ref|XP_002299722.1| predicted protein [Populus trichocarpa] gi|2...   512   e-143

>ref|XP_002279072.1| PREDICTED: peroxisome biogenesis protein 2 [Vitis vinifera]
            gi|297743241|emb|CBI36108.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  529 bits (1363), Expect = e-148
 Identities = 258/341 (75%), Positives = 292/341 (85%)
 Frame = -2

Query: 1316 ETLASSTSSSAGPLPQENAWIDVYHRLLPQWKSIVDSSQTPIPVSISRVNQVDASRLDVE 1137
            +TL SS+++SA  +  E+AW+  Y RL PQW+S   S Q+ IPVSISRVNQVDA+RLD+E
Sbjct: 4    QTLDSSSTASA--VAPEDAWVHTYQRLQPQWQSFSLSQQSTIPVSISRVNQVDAARLDIE 61

Query: 1136 ISAMLKEQLVKVFTLLKPGFLFQYEPELEAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 957
            ISAMLKEQLVKVF+L+KPG LFQYEPEL+AFLEFLIWRFSIWVDKPTPGN LMNLRYRDE
Sbjct: 62   ISAMLKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLRYRDE 121

Query: 956  RAITTTGKDVRTGLEGPGLTTSQKMWYCFASVGGQYIWARLQSFSAFRRWGDSEQRSYAR 777
            R +   GK VRTGLEGPGLT +QK+WYC A+VGGQYIWARLQSFSAFRRWGDSEQRS AR
Sbjct: 122  RTMELRGK-VRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRSVAR 180

Query: 776  HLWGLLQRVEGFYKAASFSNLLVFLYTGRYRSLIERALRARLVYGSPNMNRAVSFEYMNR 597
              W ++QR+EG YKAASFSNLL+FL+TGRYR+LIERAL+ARLVYGSPNMNRAVSFEYMNR
Sbjct: 181  RAWIMIQRIEGLYKAASFSNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNR 240

Query: 596  QLVWNEFSEMXXXXXXXLNSSSIRKILLPFSKDKDSASATDETTCPICQTNPTTPFFALP 417
            QLVWNEFSEM       LNSSSIR  L PFSK+K S+S  DET CPICQ +PT PF ALP
Sbjct: 241  QLVWNEFSEMLLLLLPLLNSSSIRNFLRPFSKNKSSSSEGDETACPICQASPTIPFLALP 300

Query: 416  CQHRYCYYCLRTRCAAATSFRCSRCNEPVIAMQRFGGSFNS 294
            C+HRYCYYCLRTRCAAA+SFRC RC+EPV+AMQR  GS ++
Sbjct: 301  CEHRYCYYCLRTRCAAASSFRCIRCSEPVVAMQRHFGSVSN 341


>ref|XP_002304212.1| predicted protein [Populus trichocarpa] gi|222841644|gb|EEE79191.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  517 bits (1332), Expect = e-144
 Identities = 247/323 (76%), Positives = 276/323 (85%)
 Frame = -2

Query: 1274 PQENAWIDVYHRLLPQWKSIVDSSQTPIPVSISRVNQVDASRLDVEISAMLKEQLVKVFT 1095
            P E+ W+  Y +LLPQWK +  S Q+ IP+SISRVNQ DA+RLD+E+SAMLKEQLVKVF+
Sbjct: 10   PPEDEWVHTYLKLLPQWKPLALSHQSMIPISISRVNQFDAARLDIEMSAMLKEQLVKVFS 69

Query: 1094 LLKPGFLFQYEPELEAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAITTTGKDVRTGL 915
            L+KPG LFQYEPEL+AFLEFLIWRFSIWVDKPTPGNALM+LRYRDERA+ + GK VRTGL
Sbjct: 70   LMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMDLRYRDERAMESRGK-VRTGL 128

Query: 914  EGPGLTTSQKMWYCFASVGGQYIWARLQSFSAFRRWGDSEQRSYARHLWGLLQRVEGFYK 735
            EGPGLT +QK+WYC A+VGGQY WARLQSFSAFRRWGDSEQR  AR  W L+QRVEG YK
Sbjct: 129  EGPGLTIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWILIQRVEGLYK 188

Query: 734  AASFSNLLVFLYTGRYRSLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMXXXX 555
            AASF NLL+FLYTGR+R+LIER L+ARLVYGSPNMNRAVSFEYMNRQLVWNEFSEM    
Sbjct: 189  AASFGNLLIFLYTGRFRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLL 248

Query: 554  XXXLNSSSIRKILLPFSKDKDSASATDETTCPICQTNPTTPFFALPCQHRYCYYCLRTRC 375
               LNSSS++K L PFSKDK S+S  D+ TCPICQ  PT PF +LPCQHRYCYYCLRTRC
Sbjct: 249  LPLLNSSSVKKFLGPFSKDKSSSSKVDDDTCPICQAIPTIPFLSLPCQHRYCYYCLRTRC 308

Query: 374  AAATSFRCSRCNEPVIAMQRFGG 306
            AAA SFRC RC EPV+AMQR GG
Sbjct: 309  AAAPSFRCPRCGEPVVAMQRHGG 331


>ref|XP_003530139.1| PREDICTED: peroxisome biogenesis protein 2-like isoform 2 [Glycine
            max]
          Length = 331

 Score =  514 bits (1325), Expect = e-143
 Identities = 249/326 (76%), Positives = 276/326 (84%), Gaps = 2/326 (0%)
 Frame = -2

Query: 1277 LPQENAWIDVYHRLLPQWKSI--VDSSQTPIPVSISRVNQVDASRLDVEISAMLKEQLVK 1104
            LP  +AWI   H LLP+WKS+  +   Q+ +P+SISRVNQVDA+RLDVE+SAMLKEQLVK
Sbjct: 3    LPSHDAWIHTSHTLLPRWKSLSLLSHQQSTLPISISRVNQVDAARLDVEMSAMLKEQLVK 62

Query: 1103 VFTLLKPGFLFQYEPELEAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAITTTGKDVR 924
            VF L+KPG LFQYE EL+AFLEFLIWRFSIWVDKPTPG ALMNLRYRDERA+    K VR
Sbjct: 63   VFLLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDK-VR 121

Query: 923  TGLEGPGLTTSQKMWYCFASVGGQYIWARLQSFSAFRRWGDSEQRSYARHLWGLLQRVEG 744
            TGLEGPGLT +QK+WYC A+VGGQYIWARLQSFSAFRRWGD+EQR  AR LW L+QR+EG
Sbjct: 122  TGLEGPGLTVAQKLWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEG 181

Query: 743  FYKAASFSNLLVFLYTGRYRSLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMX 564
             Y+AASF NLL+FL TGRYR+LIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEM 
Sbjct: 182  IYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEML 241

Query: 563  XXXXXXLNSSSIRKILLPFSKDKDSASATDETTCPICQTNPTTPFFALPCQHRYCYYCLR 384
                  LNSSS++ +L PFSKDK S SA D T CPICQ  PT P+ ALPCQHRYCYYCLR
Sbjct: 242  LLLLPLLNSSSVKNLLRPFSKDKSSGSAEDGTACPICQATPTIPYVALPCQHRYCYYCLR 301

Query: 383  TRCAAATSFRCSRCNEPVIAMQRFGG 306
            TRCAAA SFRCSRC+EPV+AMQR GG
Sbjct: 302  TRCAAAPSFRCSRCSEPVVAMQRLGG 327


>ref|XP_003530138.1| PREDICTED: peroxisome biogenesis protein 2-like isoform 1 [Glycine
            max]
          Length = 333

 Score =  514 bits (1323), Expect = e-143
 Identities = 248/327 (75%), Positives = 276/327 (84%), Gaps = 3/327 (0%)
 Frame = -2

Query: 1277 LPQENAWIDVYHRLLPQWKSI--VDSSQTPIPVSISRVNQVDASRLDVEISAMLKEQLVK 1104
            LP  +AWI   H LLP+WKS+  +   Q+ +P+SISRVNQVDA+RLDVE+SAMLKEQLVK
Sbjct: 3    LPSHDAWIHTSHTLLPRWKSLSLLSHQQSTLPISISRVNQVDAARLDVEMSAMLKEQLVK 62

Query: 1103 VFTLLKPGFLFQYEPELEAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAITTTGKD-V 927
            VF L+KPG LFQYE EL+AFLEFLIWRFSIWVDKPTPG ALMNLRYRDERA+    K  +
Sbjct: 63   VFLLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDKGKI 122

Query: 926  RTGLEGPGLTTSQKMWYCFASVGGQYIWARLQSFSAFRRWGDSEQRSYARHLWGLLQRVE 747
            RTGLEGPGLT +QK+WYC A+VGGQYIWARLQSFSAFRRWGD+EQR  AR LW L+QR+E
Sbjct: 123  RTGLEGPGLTVAQKLWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIE 182

Query: 746  GFYKAASFSNLLVFLYTGRYRSLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEM 567
            G Y+AASF NLL+FL TGRYR+LIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEM
Sbjct: 183  GIYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEM 242

Query: 566  XXXXXXXLNSSSIRKILLPFSKDKDSASATDETTCPICQTNPTTPFFALPCQHRYCYYCL 387
                   LNSSS++ +L PFSKDK S SA D T CPICQ  PT P+ ALPCQHRYCYYCL
Sbjct: 243  LLLLLPLLNSSSVKNLLRPFSKDKSSGSAEDGTACPICQATPTIPYVALPCQHRYCYYCL 302

Query: 386  RTRCAAATSFRCSRCNEPVIAMQRFGG 306
            RTRCAAA SFRCSRC+EPV+AMQR GG
Sbjct: 303  RTRCAAAPSFRCSRCSEPVVAMQRLGG 329


>ref|XP_002299722.1| predicted protein [Populus trichocarpa] gi|222846980|gb|EEE84527.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  512 bits (1319), Expect = e-143
 Identities = 253/342 (73%), Positives = 283/342 (82%)
 Frame = -2

Query: 1304 SSTSSSAGPLPQENAWIDVYHRLLPQWKSIVDSSQTPIPVSISRVNQVDASRLDVEISAM 1125
            SS++ S  P P E+ WI  Y +LLP+W+    S Q+ IP+SISRVNQ DA+RLD+E+SAM
Sbjct: 2    SSSNLSQQP-PPEDEWIRTYLKLLPEWQPPALSHQSMIPISISRVNQFDAARLDIEMSAM 60

Query: 1124 LKEQLVKVFTLLKPGFLFQYEPELEAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAIT 945
            LKEQLVKVF+L+KPG LFQYEPEL+AFLEFLIWRFSIWVDKPTPGNALMNLRYRDERA+ 
Sbjct: 61   LKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAMD 120

Query: 944  TTGKDVRTGLEGPGLTTSQKMWYCFASVGGQYIWARLQSFSAFRRWGDSEQRSYARHLWG 765
            + GK VRTGLEGPGLT +QK+WYC A+VGGQY WARLQSFSAFRRWGDSEQR  AR  W 
Sbjct: 121  SIGK-VRTGLEGPGLTIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWI 179

Query: 764  LLQRVEGFYKAASFSNLLVFLYTGRYRSLIERALRARLVYGSPNMNRAVSFEYMNRQLVW 585
            L+QR+EG YKAASF NLL+FLYTGR+R+LIER L+ARLVYGSPNMNRAVSFEYMNRQLVW
Sbjct: 180  LIQRIEGLYKAASFGNLLIFLYTGRFRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVW 239

Query: 584  NEFSEMXXXXXXXLNSSSIRKILLPFSKDKDSASATDETTCPICQTNPTTPFFALPCQHR 405
            NEFSEM       LNSSSI+K L PFSKDK S+S  D+ TCPICQ  PT PF ALPCQHR
Sbjct: 240  NEFSEMLLLLLPLLNSSSIKKFLSPFSKDKSSSSKVDDDTCPICQAIPTIPFLALPCQHR 299

Query: 404  YCYYCLRTRCAAATSFRCSRCNEPVIAMQRFGGSFNSRTSQN 279
            YCYYCL TRCAAATSFRC RC E V+AMQR   S  S T+ N
Sbjct: 300  YCYYCLSTRCAAATSFRCPRCGEAVVAMQRH-SSLASNTNPN 340


Top