BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012562
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   518   e-145
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              512   e-143
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   512   e-143
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   488   e-135
ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   485   e-135

>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  518 bits (1335), Expect = e-145
 Identities = 264/329 (80%), Positives = 293/329 (89%)
 Frame = +2

Query: 2    EQIANRADRMRIGTEDLYLYSSTDIEDILEKIPVLSPRALIIDSIQTVYLKGVTGSAGGI 181
            EQI NRADRM IGTE+LYLYSSTDIEDIL KI  LSPRALIIDSIQTVYLKGV GSAGG+
Sbjct: 196  EQIGNRADRMEIGTEELYLYSSTDIEDILGKIQHLSPRALIIDSIQTVYLKGVAGSAGGL 255

Query: 182  SQVKECTSSLLRFAKKTNIPVFLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEKYSAHRFL 361
            SQVKECTS+LLRFAK TNIP+ LIGHV K+GDIAGPRVLEHIVDVVLYMEGEKYS+HR L
Sbjct: 256  SQVKECTSALLRFAKTTNIPILLIGHVNKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRLL 315

Query: 362  RSVKNRFGTTDELGVFEMSQEGLQAVSNPSDIFLSELHSDSEILAGLAIAVIMDGSRTFL 541
            R VKNRFG+TDELGVFEMSQ GL  VSNPS+IFL+E HSDS+ LAGLA+AVIMDGSR+FL
Sbjct: 316  RPVKNRFGSTDELGVFEMSQLGLAVVSNPSEIFLTEQHSDSDFLAGLAVAVIMDGSRSFL 375

Query: 542  LEIQALCLSDTSVARQFTGVRESRTQMIISVLIKQAGLMLQNHAIFVNVVSGIKLEETAG 721
            +EIQALC+S +SV+R   G++ SR  MIISVLIKQAGLMLQ +AIF+NVVSG+ L ETAG
Sbjct: 376  IEIQALCVSGSSVSRHINGIQSSRADMIISVLIKQAGLMLQENAIFLNVVSGVMLTETAG 435

Query: 722  DLAIAAAVCSSFLESPIPNDVAFIGEIGLAGELRAVPRMEKRVNAVAKLGYKKCIIPKSA 901
            D+AIAAA+CSSFLE PIPN++AFIGEIGL GELRAVPRMEKRV+ VAKLGYK C+IPKSA
Sbjct: 436  DVAIAAAICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYKMCVIPKSA 495

Query: 902  EKSLATLDVDGMMILGCKNLKEVINNVFQ 988
            EKSLA L   GM I+GCKNLKEVIN VF+
Sbjct: 496  EKSLANLGFQGMKIVGCKNLKEVINTVFK 524


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  512 bits (1318), Expect = e-143
 Identities = 259/328 (78%), Positives = 296/328 (90%)
 Frame = +2

Query: 2    EQIANRADRMRIGTEDLYLYSSTDIEDILEKIPVLSPRALIIDSIQTVYLKGVTGSAGGI 181
            EQI NRADRMRI TE+L+LYSSTDIEDIL ++ +LSPRAL++DSIQTVYLKGV GSAGG+
Sbjct: 255  EQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGL 314

Query: 182  SQVKECTSSLLRFAKKTNIPVFLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEKYSAHRFL 361
            SQVKECTS+LLRFAKKTNIPVFLIGHVTK+GDIAGPRVLEHIVDVVLYMEGEK+S+HR L
Sbjct: 315  SQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLL 374

Query: 362  RSVKNRFGTTDELGVFEMSQEGLQAVSNPSDIFLSELHSDSEILAGLAIAVIMDGSRTFL 541
            RSVKNRFG+TDELGVFEM+Q GLQ VSNPS++FLSE +SDSEIL GLA+AVIMDGSR+FL
Sbjct: 375  RSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIMDGSRSFL 434

Query: 542  LEIQALCLSDTSVARQFTGVRESRTQMIISVLIKQAGLMLQNHAIFVNVVSGIKLEETAG 721
            LEIQALCLS ++VARQ  GV  SR  MII+VL+KQAGL LQ++ IF+NVVSG+ L ETAG
Sbjct: 435  LEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAG 494

Query: 722  DLAIAAAVCSSFLESPIPNDVAFIGEIGLAGELRAVPRMEKRVNAVAKLGYKKCIIPKSA 901
            DLA+AAA+CSSFLE PIPN +AFIGEIGL GELR VPRMEKRVN VAKLGYKKCI+PK+A
Sbjct: 495  DLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAA 554

Query: 902  EKSLATLDVDGMMILGCKNLKEVINNVF 985
            EKSL TL+   + I+GC+N+KEVIN VF
Sbjct: 555  EKSLPTLEDMNIEIVGCRNMKEVINTVF 582


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  512 bits (1318), Expect = e-143
 Identities = 259/328 (78%), Positives = 296/328 (90%)
 Frame = +2

Query: 2    EQIANRADRMRIGTEDLYLYSSTDIEDILEKIPVLSPRALIIDSIQTVYLKGVTGSAGGI 181
            EQI NRADRMRI TE+L+LYSSTDIEDIL ++ +LSPRAL++DSIQTVYLKGV GSAGG+
Sbjct: 296  EQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGVIGSAGGL 355

Query: 182  SQVKECTSSLLRFAKKTNIPVFLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEKYSAHRFL 361
            SQVKECTS+LLRFAKKTNIPVFLIGHVTK+GDIAGPRVLEHIVDVVLYMEGEK+S+HR L
Sbjct: 356  SQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKHSSHRLL 415

Query: 362  RSVKNRFGTTDELGVFEMSQEGLQAVSNPSDIFLSELHSDSEILAGLAIAVIMDGSRTFL 541
            RSVKNRFG+TDELGVFEM+Q GLQ VSNPS++FLSE +SDSEIL GLA+AVIMDGSR+FL
Sbjct: 416  RSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIMDGSRSFL 475

Query: 542  LEIQALCLSDTSVARQFTGVRESRTQMIISVLIKQAGLMLQNHAIFVNVVSGIKLEETAG 721
            LEIQALCLS ++VARQ  GV  SR  MII+VL+KQAGL LQ++ IF+NVVSG+ L ETAG
Sbjct: 476  LEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAG 535

Query: 722  DLAIAAAVCSSFLESPIPNDVAFIGEIGLAGELRAVPRMEKRVNAVAKLGYKKCIIPKSA 901
            DLA+AAA+CSSFLE PIPN +AFIGEIGL GELR VPRMEKRVN VAKLGYKKCI+PK+A
Sbjct: 536  DLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKKCIVPKAA 595

Query: 902  EKSLATLDVDGMMILGCKNLKEVINNVF 985
            EKSL TL+   + I+GC+N+KEVIN VF
Sbjct: 596  EKSLPTLEDMNIEIVGCRNMKEVINTVF 623


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  488 bits (1255), Expect = e-135
 Identities = 250/333 (75%), Positives = 286/333 (85%)
 Frame = +2

Query: 2    EQIANRADRMRIGTEDLYLYSSTDIEDILEKIPVLSPRALIIDSIQTVYLKGVTGSAGGI 181
            EQI NRADR+RI + D+YLYSS D+EDIL+K+  LSP ALI+DSIQTVYLKG+ GS GGI
Sbjct: 228  EQIGNRADRLRIES-DIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGIMGSPGGI 286

Query: 182  SQVKECTSSLLRFAKKTNIPVFLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEKYSAHRFL 361
             QVKECTS+LLRFAKKTNIPV LIGHVTK+GDIAGPRVLEHIVDVVLYMEGEKYS+HR L
Sbjct: 287  MQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRML 346

Query: 362  RSVKNRFGTTDELGVFEMSQEGLQAVSNPSDIFLSELHSDSEILAGLAIAVIMDGSRTFL 541
            R+VKNRFG+ DELGVFEMS  GLQAVSN S++FLSE   DSEILAGLA+AVIMDGSRTFL
Sbjct: 347  RAVKNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFL 406

Query: 542  LEIQALCLSDTSVARQFTGVRESRTQMIISVLIKQAGLMLQNHAIFVNVVSGIKLEETAG 721
            +EIQALCLS ++ +RQ  G+++ R  MIISVLIKQAGL LQ HA+F+NVVSG+ L ETAG
Sbjct: 407  IEIQALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAG 466

Query: 722  DLAIAAAVCSSFLESPIPNDVAFIGEIGLAGELRAVPRMEKRVNAVAKLGYKKCIIPKSA 901
            DLAIAAA+CSS LE PIPND+AFIGEIGL GELR VPRMEKRV  VAKLGY+ CI+PK A
Sbjct: 467  DLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVA 526

Query: 902  EKSLATLDVDGMMILGCKNLKEVINNVFQG*MR 1000
            EK+L T  ++ M ++GC+NLKEVIN VF   MR
Sbjct: 527  EKALGTEGLEKMEVVGCRNLKEVINTVFLNIMR 559


>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
            gi|355521082|gb|AET01536.1| DNA repair protein radA-like
            protein [Medicago truncatula]
          Length = 643

 Score =  485 bits (1249), Expect = e-135
 Identities = 243/333 (72%), Positives = 288/333 (86%)
 Frame = +2

Query: 2    EQIANRADRMRIGTEDLYLYSSTDIEDILEKIPVLSPRALIIDSIQTVYLKGVTGSAGGI 181
            EQI NRADR+ IG+ D+YLYSS DIEDIL+K+  +SPRAL++DS+QTVYLKG+ GS GGI
Sbjct: 227  EQIGNRADRLTIGS-DIYLYSSNDIEDILKKVQYISPRALVVDSVQTVYLKGIMGSPGGI 285

Query: 182  SQVKECTSSLLRFAKKTNIPVFLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEKYSAHRFL 361
             QVKECTS+LLRFAK TNIPV LIGHVTK+GDIAGPRVLEHIVDVVLYMEGEKY++HR L
Sbjct: 286  MQVKECTSALLRFAKTTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYTSHRML 345

Query: 362  RSVKNRFGTTDELGVFEMSQEGLQAVSNPSDIFLSELHSDSEILAGLAIAVIMDGSRTFL 541
            R+VKNRFG+TDELGVFEMS  GLQAVSN S++FLSE   DS++LAGLA+AVIMDGSRTFL
Sbjct: 346  RAVKNRFGSTDELGVFEMSHSGLQAVSNASEMFLSEQDLDSDVLAGLAVAVIMDGSRTFL 405

Query: 542  LEIQALCLSDTSVARQFTGVRESRTQMIISVLIKQAGLMLQNHAIFVNVVSGIKLEETAG 721
            +EIQALCLS ++ +RQF G++ +R  MIISVLIKQAGL LQ HA+F+NVVSG+ + ETAG
Sbjct: 406  IEIQALCLSGSTGSRQFNGIQANRADMIISVLIKQAGLRLQEHAVFLNVVSGLTVTETAG 465

Query: 722  DLAIAAAVCSSFLESPIPNDVAFIGEIGLAGELRAVPRMEKRVNAVAKLGYKKCIIPKSA 901
            DLAIAAA+CSS LE PIPND+AFIGEIGL GELR V RMEKRV+ VAKLGY+ CIIPK+A
Sbjct: 466  DLAIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRMCIIPKAA 525

Query: 902  EKSLATLDVDGMMILGCKNLKEVINNVFQG*MR 1000
            EK L T  ++ + ++GC+NLK+VIN +F   MR
Sbjct: 526  EKVLGTEGLENIKVVGCRNLKDVINTIFPNVMR 558