BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012554
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002512769.1| pentatricopeptide repeat-containing protein,...   104   9e-21
ref|XP_003623854.1| Pentatricopeptide repeat-containing protein ...    85   5e-15
gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]    85   5e-15
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15

>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
           protein product [Vitis vinifera]
          Length = 687

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/89 (64%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
 Frame = -1

Query: 264 MLRKLPTNLPSHLSHKFMKFYLNSGDLQSARRMFDKIPEPDLPTWTILITAHTKQGHPKE 85
           ML KLPT+LP HL+ KF+K Y NSGDLQ AR +FDKIP+PDLPTWTILI+A TK G   E
Sbjct: 1   MLSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLE 60

Query: 84  SLALYSELRRRNVV-PDSLVLLSAAKACA 1
           ++  Y++ R +N V PD L+LLS AKACA
Sbjct: 61  AIQYYNDFRHKNCVEPDKLLLLSVAKACA 89


>ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547780|gb|EEF49272.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/88 (60%), Positives = 63/88 (71%)
 Frame = -1

Query: 264 MLRKLPTNLPSHLSHKFMKFYLNSGDLQSARRMFDKIPEPDLPTWTILITAHTKQGHPKE 85
           M+ KLP NL    S K +K  LNSGDL+ A  +FDKIPEPDL TWTILI+ HT+ G PK+
Sbjct: 1   MVSKLPANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKK 60

Query: 84  SLALYSELRRRNVVPDSLVLLSAAKACA 1
           ++ +YS L  RNV PD  VLLS AKACA
Sbjct: 61  AIDIYSTLLSRNVRPDKFVLLSVAKACA 88


>ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498869|gb|AES80072.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 865

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/84 (48%), Positives = 56/84 (66%)
 Frame = -1

Query: 252 LPTNLPSHLSHKFMKFYLNSGDLQSARRMFDKIPEPDLPTWTILITAHTKQGHPKESLAL 73
           LPTN+PSHL  + ++  LN GD   AR++FD IP+PD  T + LI+A T  G   E++ +
Sbjct: 92  LPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKI 151

Query: 72  YSELRRRNVVPDSLVLLSAAKACA 1
           YS L+ R + PD  V L+AAKACA
Sbjct: 152 YSSLQERGIKPDMPVFLAAAKACA 175


>gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/84 (48%), Positives = 56/84 (66%)
 Frame = -1

Query: 252 LPTNLPSHLSHKFMKFYLNSGDLQSARRMFDKIPEPDLPTWTILITAHTKQGHPKESLAL 73
           LPTN+PSHL  + ++  LN GD   AR++FD IP+PD  T + LI+A T  G   E++ +
Sbjct: 6   LPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKI 65

Query: 72  YSELRRRNVVPDSLVLLSAAKACA 1
           YS L+ R + PD  V L+AAKACA
Sbjct: 66  YSSLQERGIKPDMPVFLAAAKACA 89


>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/83 (46%), Positives = 57/83 (68%)
 Frame = -1

Query: 252 LPTNLPSHLSHKFMKFYLNSGDLQSARRMFDKIPEPDLPTWTILITAHTKQGHPKESLAL 73
           +PTN+PSHL  + +K  LN GD + A+++FD IP+PD  T + LI+A T +G P E++ L
Sbjct: 60  VPTNIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRL 119

Query: 72  YSELRRRNVVPDSLVLLSAAKAC 4
           Y+ LR R + P + V L+ AKAC
Sbjct: 120 YASLRARGIKPHNSVFLTVAKAC 142