BLASTX nr result

ID: Cimicifuga21_contig00012549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012549
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|2...   305   3e-80
ref|XP_002527602.1| nucleic acid binding protein, putative [Rici...   300   5e-79
ref|XP_004133704.1| PREDICTED: uncharacterized protein LOC101203...   293   1e-76
ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778...   292   2e-76
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              288   2e-75

>ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|222859969|gb|EEE97516.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  305 bits (780), Expect = 3e-80
 Identities = 149/168 (88%), Positives = 159/168 (94%), Gaps = 1/168 (0%)
 Frame = -2

Query: 714 GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT 535
           GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT
Sbjct: 121 GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT 180

Query: 534 FPSKKYYNLDAYHRRKVEKQIKKG-SKILETERTIFNDEEQRRQELMVAREKQKEEEVEA 358
           FPSKKYYNLDAY++ K+EK++KKG  K++ +ERT+FNDEEQRRQELM  REKQKE EVEA
Sbjct: 181 FPSKKYYNLDAYYQHKMEKELKKGFKKVMASERTVFNDEEQRRQELMREREKQKEAEVEA 240

Query: 357 LKRSMQGGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 214
           LK SMQ GMAQAMKEQA+LREEMAYQYKLGNFEAAAAIQRRLDPDVAM
Sbjct: 241 LKCSMQSGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 288


>ref|XP_002527602.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533019|gb|EEF34783.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 327

 Score =  300 bits (769), Expect = 5e-79
 Identities = 145/168 (86%), Positives = 159/168 (94%), Gaps = 1/168 (0%)
 Frame = -2

Query: 714 GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT 535
           GAVT+SWGKYG+IRETDMWNKRPEFTAWLAEVKQVNLE+LPNWEEKQMFK+FMEDHNTAT
Sbjct: 160 GAVTDSWGKYGVIRETDMWNKRPEFTAWLAEVKQVNLESLPNWEEKQMFKEFMEDHNTAT 219

Query: 534 FPSKKYYNLDAYHRRKVEKQIKKG-SKILETERTIFNDEEQRRQELMVAREKQKEEEVEA 358
           FPSKKYYNLDAY++R++EK++KKG  K  ETERT+FNDEEQRRQELM AREKQKE+EVEA
Sbjct: 220 FPSKKYYNLDAYYKRQMEKEMKKGFKKFQETERTVFNDEEQRRQELMRAREKQKEQEVEA 279

Query: 357 LKRSMQGGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 214
           LK SMQ GMAQAMKEQ +LREEMAYQYKLGNFEAAAAIQRRLDPD+ M
Sbjct: 280 LKISMQSGMAQAMKEQTQLREEMAYQYKLGNFEAAAAIQRRLDPDIPM 327


>ref|XP_004133704.1| PREDICTED: uncharacterized protein LOC101203775 [Cucumis sativus]
           gi|449478154|ref|XP_004155236.1| PREDICTED:
           uncharacterized protein LOC101231225 [Cucumis sativus]
          Length = 362

 Score =  293 bits (749), Expect = 1e-76
 Identities = 139/168 (82%), Positives = 158/168 (94%), Gaps = 1/168 (0%)
 Frame = -2

Query: 714 GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT 535
           GAVTNSWGK+GII+ETDMWNKRPEFTAWLAE+K+VNLE+L NWEEKQMFK+FMEDHNTAT
Sbjct: 195 GAVTNSWGKFGIIKETDMWNKRPEFTAWLAEIKKVNLESLANWEEKQMFKEFMEDHNTAT 254

Query: 534 FPSKKYYNLDAYHRRKVEKQIKKG-SKILETERTIFNDEEQRRQELMVAREKQKEEEVEA 358
           FPSKKYYNLDAY++RK++K +KKG  K++  ERT+F+DEEQRRQEL++ REK KEE+VE 
Sbjct: 255 FPSKKYYNLDAYYQRKIQKDMKKGQKKVVAGERTVFDDEEQRRQELLIEREKHKEEQVEV 314

Query: 357 LKRSMQGGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 214
           LKRSMQ GMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVA+
Sbjct: 315 LKRSMQTGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAL 362


>ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778706 [Glycine max]
          Length = 380

 Score =  292 bits (747), Expect = 2e-76
 Identities = 142/168 (84%), Positives = 155/168 (92%), Gaps = 1/168 (0%)
 Frame = -2

Query: 714 GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT 535
           GAVTNSWGKYG+IRETDMW KRPEFTAWLAEVKQVNLE + NWEEKQMFK+FMEDHNTAT
Sbjct: 213 GAVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTAT 272

Query: 534 FPSKKYYNLDAYHRRKVEKQIKKG-SKILETERTIFNDEEQRRQELMVAREKQKEEEVEA 358
           FPSKKYYNLDAY+RR++EK++KKG  K+  TERTIFNDEEQRRQEL+ AREK KEE+V A
Sbjct: 273 FPSKKYYNLDAYYRREMEKEMKKGFKKVQATERTIFNDEEQRRQELLQAREKHKEEQVMA 332

Query: 357 LKRSMQGGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 214
           LK SMQ GMAQAMKEQA+LREEMAYQYKLGNFEAAAAIQRRLDPD A+
Sbjct: 333 LKHSMQTGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDAAI 380


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  288 bits (738), Expect = 2e-75
 Identities = 140/168 (83%), Positives = 156/168 (92%), Gaps = 1/168 (0%)
 Frame = -2

Query: 714  GAVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTAT 535
            GAVTNSWGKYGIIRE+DMWNKRPEFTAWLAE+KQVNLE+LPNWEEKQMFK+FMEDHNTAT
Sbjct: 520  GAVTNSWGKYGIIRESDMWNKRPEFTAWLAEIKQVNLESLPNWEEKQMFKEFMEDHNTAT 579

Query: 534  FPSKKYYNLDAYHRRKVEKQIKKGS-KILETERTIFNDEEQRRQELMVAREKQKEEEVEA 358
            F SKKYYN+DAY+R+K+E+++KKGS K LETERT+FNDEEQRR EL   RE+ KE +VE 
Sbjct: 580  FTSKKYYNIDAYYRQKMEREMKKGSKKALETERTVFNDEEQRRLELQRERERYKEVQVEE 639

Query: 357  LKRSMQGGMAQAMKEQARLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 214
            LKRSMQ GMAQAMKEQA+LREEMAYQYK+GN EAAAAIQRRLDPDVAM
Sbjct: 640  LKRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAAIQRRLDPDVAM 687


Top