BLASTX nr result

ID: Cimicifuga21_contig00012548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012548
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-...   411   e-112
ref|XP_002519008.1| transcription factor, putative [Ricinus comm...   407   e-111
ref|XP_002329110.1| NAC domain protein, IPR003441 [Populus trich...   401   e-109
ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trich...   395   e-107
emb|CBI20351.3| unnamed protein product [Vitis vinifera]              394   e-107

>ref|XP_002284654.2| PREDICTED: NAC domain-containing protein 29-like [Vitis vinifera]
          Length = 353

 Score =  411 bits (1056), Expect = e-112
 Identities = 210/336 (62%), Positives = 243/336 (72%), Gaps = 12/336 (3%)
 Frame = -2

Query: 1405 GFRFHPTDEELVVHYLKKKASSSPLPLTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPR 1226
            GFRFHPTDEELVVHYLKKKASS+PLP+ IIAEVDLYKFDPWELP KA+FGEQEWYFFSPR
Sbjct: 18   GFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPR 77

Query: 1225 DRKYPNGARPNRAATSGYWKATGTDKPILTSGGTQKVGVKKALVFYGGRPPKGVKTNWIM 1046
            DRKYPNGARPNRAATSGYWKATGTDKP+LTSGGTQKVGVKKALVFYGG+PPKG+KTNWIM
Sbjct: 78   DRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKTNWIM 137

Query: 1045 HEYRLADNSNKNSMKPPCVD--NKKSSLRLDEWVLCRIYKKNNSQRPMDPDKEDSMDDML 872
            HEYRLAD  NK + KPP  D  NKK+SLRLD+WVLCRIYKKNN+ R +DPDK+DSMDDML
Sbjct: 138  HEYRLAD--NKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNTHRTLDPDKDDSMDDML 195

Query: 871  ASIPNSTMHNPLNPKAQASRT-NYGALLDNDQNFFDNLLAEDCI-TSNSISQFPSSSRLD 698
              +P S      + K Q  +  NY ALL+N+Q+ F+ ++  D I +S +ISQ   SS   
Sbjct: 196  GPVPTSISMGQQSLKLQFPKVPNYSALLENEQSLFEGMINSDGINSSGTISQLACSSSKP 255

Query: 697  HQLNMNPAMTTSTFNSKRALPSQYWSDNTVGYAPSTKRFHXXXXXXXXXXXXXXXXXXXS 518
              L++  A T+S    KR LPS YW+D+      +TKRF                    +
Sbjct: 256  DHLSLVAATTSSILPLKRTLPSLYWNDDDTAGPSTTKRFQAENTDGNIGRTTDGNNSIAT 315

Query: 517  TQFQ--------QHQLLGSLGDGVFRSPYQLPSMNW 434
               Q        Q  +LGSLG+GVFR P+QLP MNW
Sbjct: 316  LLSQLPQTPSLHQQSMLGSLGEGVFRQPFQLPGMNW 351


>ref|XP_002519008.1| transcription factor, putative [Ricinus communis]
            gi|223541671|gb|EEF43219.1| transcription factor,
            putative [Ricinus communis]
          Length = 355

 Score =  407 bits (1047), Expect = e-111
 Identities = 213/347 (61%), Positives = 251/347 (72%), Gaps = 21/347 (6%)
 Frame = -2

Query: 1405 GFRFHPTDEELVVHYLKKKASSSPLPLTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPR 1226
            GFRFHPTDEELVVHYLKKKA+S+PLP+TIIAEVDLYKFDPWELP KATFGEQEWYFFSPR
Sbjct: 18   GFRFHPTDEELVVHYLKKKAASAPLPVTIIAEVDLYKFDPWELPSKATFGEQEWYFFSPR 77

Query: 1225 DRKYPNGARPNRAATSGYWKATGTDKPILTSGGTQKVGVKKALVFYGGRPPKGVKTNWIM 1046
            DRKYPNGARPNRAATSGYWKATGTDKPIL S G QKVGVKKALVFYGG+PPKG+KTNWIM
Sbjct: 78   DRKYPNGARPNRAATSGYWKATGTDKPILASNGAQKVGVKKALVFYGGKPPKGIKTNWIM 137

Query: 1045 HEYRLADNSNKNSMKPPCVD--NKKSSLRLDEWVLCRIYKKNNSQRPMDPDKEDSMDDML 872
            HEYRL DN+N +S KPP  D  NKK SLRLD+WVLCRIYKKNNSQR MD DKEDSM+  L
Sbjct: 138  HEYRLVDNNNSSS-KPPGFDLANKKGSLRLDDWVLCRIYKKNNSQRTMDRDKEDSMEGFL 196

Query: 871  ASIPNSTMHNPLNPKAQASRTN-----YGALLDNDQNFFDNLL-AEDCITSNSIS-QFPS 713
            A++       P+NPK  +S  +     YG++LDN++NFF+ +L   D + ++S+S QFPS
Sbjct: 197  ATL-------PINPKPASSSVSKPAHAYGSVLDNEENFFEGILTGGDGMQNSSVSHQFPS 249

Query: 712  SSRLDHQLNMNPAMTTSTFNSKRALPSQYW-----SDNTVGYAPSTKRFHXXXXXXXXXX 548
            SS   H +++    T++    KR +PSQYW     + +++  A S KRFH          
Sbjct: 250  SSPKQH-MSIASISTSNPLAIKRVIPSQYWNHEAIAGSSIAAASSGKRFHGDLNSCSTGT 308

Query: 547  XXXXXXXXXSTQ-------FQQHQLLGSLGDGVFRSPYQLPSMNWNS 428
                      +Q       F  +  +GSLGDGV R  +QLPSMNWNS
Sbjct: 309  EDNTSFVSLLSQLPQAGAPFHSNTFIGSLGDGVLRQQFQLPSMNWNS 355


>ref|XP_002329110.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222869779|gb|EEF06910.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 360

 Score =  401 bits (1031), Expect = e-109
 Identities = 210/345 (60%), Positives = 237/345 (68%), Gaps = 19/345 (5%)
 Frame = -2

Query: 1405 GFRFHPTDEELVVHYLKKKASSSPLPLTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPR 1226
            GFRFHPTDEELVVHYLKKK +S+PLP+ IIAEVDLYKFDPWELP KATFGEQEWYFFSPR
Sbjct: 31   GFRFHPTDEELVVHYLKKKTTSAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPR 90

Query: 1225 DRKYPNGARPNRAATSGYWKATGTDKPILTSGGTQKVGVKKALVFYGGRPPKGVKTNWIM 1046
            DRKYPNGARPNRAATSGYWKATGTDKP+L+SGGTQKVGVKKALVFYGG+PPKG+KTNWIM
Sbjct: 91   DRKYPNGARPNRAATSGYWKATGTDKPVLSSGGTQKVGVKKALVFYGGKPPKGIKTNWIM 150

Query: 1045 HEYRLADNSNKNSMKPPCVD--NKKSSLRLDEWVLCRIYKKNNSQRPMDPDKEDSMDDML 872
            HEYRLADN   N  KPP  D  NKK+SLRLD+WVLCRIYKKNN+QRPMD DK+DSMDD+L
Sbjct: 151  HEYRLADNKVNN--KPPGCDLGNKKNSLRLDDWVLCRIYKKNNTQRPMDHDKDDSMDDVL 208

Query: 871  ASIP---------NSTMHNPLNPKAQASRTNYGALLDNDQNFFDNLLAEDCITSNSISQF 719
             SIP         N T+H        A  TN+GALLDND N F+ ++      S+S    
Sbjct: 209  GSIPPSISVGSHQNGTLH-------LAKGTNFGALLDNDHNLFEGII------SSSDGIR 255

Query: 718  PSSSRLDHQLNMNPAMTTSTFNSKRALPSQYWSDNTVGYAPSTKRFH--------XXXXX 563
             SSS L H  +            KR LPS YW+   +    S+KRF              
Sbjct: 256  SSSSSLSHMASSVTKRDLLMLPPKRTLPSLYWTGEDMVGPSSSKRFQGGINGDEIVVRTD 315

Query: 562  XXXXXXXXXXXXXXSTQFQQHQLLGSLGDGVFRSPYQLPSMNWNS 428
                          + Q  Q  +LGS+ DG+FRSPYQ+PSMNW S
Sbjct: 316  GNSSVATLLGELPQTPQLHQQTMLGSMADGIFRSPYQIPSMNWYS 360


>ref|XP_002316919.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222859984|gb|EEE97531.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 355

 Score =  395 bits (1015), Expect = e-107
 Identities = 205/340 (60%), Positives = 237/340 (69%), Gaps = 14/340 (4%)
 Frame = -2

Query: 1405 GFRFHPTDEELVVHYLKKKASSSPLPLTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPR 1226
            GFRFHPTDEELVVHYLKKK +S+PLP+ IIAEVDLYKFDPWELP KATFGEQEWYFFSPR
Sbjct: 26   GFRFHPTDEELVVHYLKKKTTSAPLPMAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPR 85

Query: 1225 DRKYPNGARPNRAATSGYWKATGTDKPILTSGGTQKVGVKKALVFYGGRPPKGVKTNWIM 1046
            DRKYPNG RPNRAATSGYWKATGTDKPILT GGTQKVGVKKALVFYGG+PPKG+KTNWIM
Sbjct: 86   DRKYPNGTRPNRAATSGYWKATGTDKPILTLGGTQKVGVKKALVFYGGKPPKGIKTNWIM 145

Query: 1045 HEYRLADNSNKNSMKPPCVD--NKKSSLRLDEWVLCRIYKKNNSQRPMDPDKEDSMDDML 872
            HEYRLADN  KN  KPP  D  NKK+SLRLD+WVLCRIYKKNN+ RP+D DK+D MDD+L
Sbjct: 146  HEYRLADNKVKN--KPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRPIDHDKDDYMDDIL 203

Query: 871  ASIPNSTM--HNPLNPKAQASRTNYGALLDNDQNFFDNLLA--EDCITSNSISQFPSSSR 704
             SIP S +  ++       A  TNY  LLDND N F+ +++  +   +S+S+S   SS  
Sbjct: 204  GSIPPSILVGNHQNGTLHLAKGTNYETLLDNDHNLFEGIISSNDGIRSSSSMSHVASSVS 263

Query: 703  LDHQLNMNPAMTTSTFNSKRALPSQYWSDNTVGYAPSTKRFH--------XXXXXXXXXX 548
                L M P         KR LPS YW+D  +    S+KRF                   
Sbjct: 264  KPDHLPMLPL--------KRTLPSLYWTDEDMAVPSSSKRFQGDINGDESVVGNDGNSSI 315

Query: 547  XXXXXXXXXSTQFQQHQLLGSLGDGVFRSPYQLPSMNWNS 428
                     ++Q  Q  +LGS+G+G+FR PYQ+P MNW S
Sbjct: 316  VTLLSQLPQTSQLHQQTMLGSMGNGIFRPPYQIPGMNWYS 355


>emb|CBI20351.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  394 bits (1011), Expect = e-107
 Identities = 202/335 (60%), Positives = 232/335 (69%), Gaps = 11/335 (3%)
 Frame = -2

Query: 1405 GFRFHPTDEELVVHYLKKKASSSPLPLTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPR 1226
            GFRFHPTDEELVVHYLKKKASS+PLP+ IIAEVDLYKFDPWELP KA+FGEQEWYFFSPR
Sbjct: 18   GFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPR 77

Query: 1225 DRKYPNGARPNRAATSGYWKATGTDKPILTSGGTQKVGVKKALVFYGGRPPKGVKTNWIM 1046
            DRKYPNGARPNRAATSGYWKATGTDKP+LTSGGTQKVGVKKALVFYGG+PPKG+KTNWIM
Sbjct: 78   DRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGIKTNWIM 137

Query: 1045 HEYRLADNSNKNSMKPPCVD--NKKSSLRLDEWVLCRIYKKNNSQRPMDPDKEDSMDDML 872
            HEYRLAD  NK + KPP  D  NKK+SLRLD+WVLCRIYKKNN+ R +DPDK+DSMDDML
Sbjct: 138  HEYRLAD--NKVNTKPPGCDMGNKKNSLRLDDWVLCRIYKKNNTHRTLDPDKDDSMDDML 195

Query: 871  ASIPNSTMHNPLNPKAQASRT-NYGALLDNDQNFFDNLLAEDCITSNSISQFPSSSRLDH 695
              +P S      + K Q  +  NY ALL+N+Q+ F+ ++  D I +              
Sbjct: 196  GPVPTSISMGQQSLKLQFPKVPNYSALLENEQSLFEGMINSDGINTT------------- 242

Query: 694  QLNMNPAMTTSTFNSKRALPSQYWSDNTVGYAPSTKRFHXXXXXXXXXXXXXXXXXXXST 515
                    T+S    KR LPS YW+D+      +TKRF                    + 
Sbjct: 243  --------TSSILPLKRTLPSLYWNDDDTAGPSTTKRFQAENTDGNIGRTTDGNNSIATL 294

Query: 514  QFQ--------QHQLLGSLGDGVFRSPYQLPSMNW 434
              Q        Q  +LGSLG+GVFR P+QLP MNW
Sbjct: 295  LSQLPQTPSLHQQSMLGSLGEGVFRQPFQLPGMNW 329


Top