BLASTX nr result

ID: Cimicifuga21_contig00012532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012532
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157051.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    68   9e-10
ref|XP_004138593.1| PREDICTED: uncharacterized protein LOC101203...    68   9e-10
ref|XP_002268620.1| PREDICTED: uncharacterized protein LOC100247...    64   2e-08
ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251...    63   3e-08
ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_004157051.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228329
            [Cucumis sativus]
          Length = 844

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23   RRELGMSWVAKELVLVETVQKKLTRRLYKARNNLDQPLQVTFFHFEVRDRKKKAVFTVKL 202
            RR     WV K   L  T ++KL + +  AR+      QV+  H  + + + ++V++V +
Sbjct: 675  RRVESDQWVTK---LTPTNEEKLQKEISIARS-----FQVSLSHGNIFEVRGESVYSVDV 726

Query: 203  DEMYCSCGKWMHTQFPCQHAIASHGMRRINNNVLEYCSDLLKVSQFVLCYQSNMEAISN- 379
            D   CSC  W  T  PC HAIA   +  I  +  +YC     V  + L Y  ++  I N 
Sbjct: 727  DNWDCSCKAWQLTGLPCCHAIAV--IECIGRSPYDYCPRYFTVESYRLTYAESIHPIPNV 784

Query: 380  -PIELQQFVQRDIPILPPICRRKPGRP 457
              + L +  Q  + + PP  RR PGRP
Sbjct: 785  DRLILGESTQAIVTVTPPPTRRPPGRP 811


>ref|XP_004138593.1| PREDICTED: uncharacterized protein LOC101203713 [Cucumis sativus]
          Length = 850

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23   RRELGMSWVAKELVLVETVQKKLTRRLYKARNNLDQPLQVTFFHFEVRDRKKKAVFTVKL 202
            RR     WV K   L  T ++KL + +  AR+      QV+  H  + + + ++V++V +
Sbjct: 681  RRVESDQWVTK---LTPTNEEKLQKEISIARS-----FQVSLSHGNIFEVRGESVYSVDV 732

Query: 203  DEMYCSCGKWMHTQFPCQHAIASHGMRRINNNVLEYCSDLLKVSQFVLCYQSNMEAISN- 379
            D   CSC  W  T  PC HAIA   +  I  +  +YC     V  + L Y  ++  I N 
Sbjct: 733  DNWDCSCKAWQLTGLPCCHAIAV--IECIGRSPYDYCPRYFTVESYRLTYAESIHPIPNV 790

Query: 380  -PIELQQFVQRDIPILPPICRRKPGRP 457
              + L +  Q  + + PP  RR PGRP
Sbjct: 791  DRLILGESTQAIVTVTPPPTRRPPGRP 817


>ref|XP_002268620.1| PREDICTED: uncharacterized protein LOC100247698 [Vitis vinifera]
          Length = 746

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
 Frame = +2

Query: 2    IISLHQRRRELGMSWVAKELVLVETVQKKLTRRLYKARNNLDQPLQVTFFHFEVRDRKKK 181
            ++ L  +RR     W+ K   L  + ++KL +    AR+     LQV   H    + + +
Sbjct: 570  MMELIYKRRVDSSQWITK---LTPSKEEKLLKDTSTARS-----LQVLLSHGSTFEVRGE 621

Query: 182  AVFTVKLDEMYCSCGKWMHTQFPCQHAIASHGMRRINNNVLEYCSDLLKVSQFVLCYQSN 361
            ++  V +D   CSC  W  +  PC HAIA      I  N  +YCS    V  + L Y  +
Sbjct: 622  SIDIVDIDHWDCSCKDWQLSGLPCCHAIAV--FEWIGRNPYDYCSRYFTVESYRLTYAES 679

Query: 362  MEAISN---PIELQQFVQRDIPILPPICRRKPGRP 457
            +  + N   P++ +   Q  I + PP  +R PGRP
Sbjct: 680  IHPVPNVDRPVKTES-TQVGIIVTPPPTKRPPGRP 713


>ref|XP_002276424.1| PREDICTED: uncharacterized protein LOC100251030 [Vitis vinifera]
          Length = 768

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
 Frame = +2

Query: 2    IISLHQRRRELGMSWVAKELVLVETVQKKLTRRLYKARNNLDQPLQVTFFHFEVRDRKKK 181
            I+ L   RR     W+ +   L  ++++KL +   K R     PLQV        + +  
Sbjct: 591  IMELFFTRRTDSNQWMTR---LTPSMEEKLEKETVKVR-----PLQVLLSGGNTFEVRGD 642

Query: 182  AVFTVKLDEMYCSCGKWMHTQFPCQHAIASHGMRRINNNVLEYCSDLLKVSQFVLCYQSN 361
             +  V +D   CSC  W  T  PC HAIA   +  I  +  EYCS       + L Y  +
Sbjct: 643  TIEVVDIDHWDCSCKGWQLTGLPCCHAIAV--ISCIGQSPYEYCSRYFTTESYRLTYSES 700

Query: 362  MEAISN---PIELQQFVQRDIPILPPICRRKPGRPPT 463
            +  I N   P+E    +   + + PP  RR PGRP T
Sbjct: 701  VHPIPNVDRPMEKDSSLVA-VTVTPPPTRRPPGRPTT 736


>ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|222871420|gb|EEF08551.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
 Frame = +2

Query: 2   IISLHQRRRELGMSWVAKELVLVETVQKKLTRRLYKARNNLDQPLQVTFFHFEVRDRKKK 181
           I+ L   RR     W+ +   L  + ++KL +   K  +   Q L      FEVR    +
Sbjct: 406 IMELIYTRRADSNQWLTR---LTPSSEEKLEKETLKVHSL--QVLLSAGSTFEVRG---E 457

Query: 182 AVFTVKLDEMYCSCGKWMHTQFPCQHAIASHGMRRINNNVLEYCSDLLKVSQFVLCYQSN 361
           +V  V +D   CSC +W  T FPC HA+A  G   I     +YCS       + L Y  +
Sbjct: 458 SVEVVDIDRWDCSCKEWQLTGFPCCHALAVIGC--IGRCPYDYCSRYFTTESYRLTYSES 515

Query: 362 MEAISN---PIELQQFVQRDIPILPPICRRKPGRPPT 463
           +  ++N   P+E +   Q  + + PP  RR PGRP T
Sbjct: 516 VHPVTNVDMPVE-KDSSQVVVTVTPPPTRRPPGRPTT 551


Top