BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012499
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              356   4e-96
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   356   4e-96
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   345   1e-92
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   341   2e-91
ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation spec...   340   4e-91

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  356 bits (914), Expect = 4e-96
 Identities = 174/205 (84%), Positives = 188/205 (91%)
 Frame = +1

Query: 1    AQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESWKGSKLLSRA 180
            AQL LLAKDFG+LDCF+TEFLIDGSTLSL+VSD+QKN+QIFYYAPK SESWKG KLLSRA
Sbjct: 1244 AQLNLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRA 1303

Query: 181  EFHVGAHVTKFLRLQMRPTSSDRTSAAPGSDKTNRFALLFATLDGSVGCIAPVEELTFRR 360
            EFHVGAHVTKFLRLQM P SSDRTSA  GSDKTNRFALLF TLDGS+GCIAP++ELTFRR
Sbjct: 1304 EFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRR 1363

Query: 361  LQTLQKKMVDAVAHTGGLNPRSFRQFHSNGKAHRPGPDNLIDCELLGHYEMLALEEQLEI 540
            LQ+LQKK+VDAV H  GLNPRSFRQF SNGKAHRPGPDN++DCELL HYEML  EEQLEI
Sbjct: 1364 LQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEI 1423

Query: 541  AHQIGTTRGQILTNLNDLSVGTSFL 615
            A QIGTTR QIL+NLNDLS+GTSFL
Sbjct: 1424 AQQIGTTRMQILSNLNDLSLGTSFL 1448


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  356 bits (914), Expect = 4e-96
 Identities = 174/205 (84%), Positives = 188/205 (91%)
 Frame = +1

Query: 1    AQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESWKGSKLLSRA 180
            AQL LLAKDFG+LDCF+TEFLIDGSTLSL+VSD+QKN+QIFYYAPK SESWKG KLLSRA
Sbjct: 1238 AQLNLLAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRA 1297

Query: 181  EFHVGAHVTKFLRLQMRPTSSDRTSAAPGSDKTNRFALLFATLDGSVGCIAPVEELTFRR 360
            EFHVGAHVTKFLRLQM P SSDRTSA  GSDKTNRFALLF TLDGS+GCIAP++ELTFRR
Sbjct: 1298 EFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRR 1357

Query: 361  LQTLQKKMVDAVAHTGGLNPRSFRQFHSNGKAHRPGPDNLIDCELLGHYEMLALEEQLEI 540
            LQ+LQKK+VDAV H  GLNPRSFRQF SNGKAHRPGPDN++DCELL HYEML  EEQLEI
Sbjct: 1358 LQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEI 1417

Query: 541  AHQIGTTRGQILTNLNDLSVGTSFL 615
            A QIGTTR QIL+NLNDLS+GTSFL
Sbjct: 1418 AQQIGTTRMQILSNLNDLSLGTSFL 1442


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  345 bits (885), Expect = 1e-92
 Identities = 165/205 (80%), Positives = 187/205 (91%)
 Frame = +1

Query: 1    AQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESWKGSKLLSRA 180
            AQL+LLAKDFG+LDCF+TEFLIDGSTLSLVVSDEQKN+QIFYYAPK  ESWKG KLLSRA
Sbjct: 1257 AQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMLESWKGQKLLSRA 1316

Query: 181  EFHVGAHVTKFLRLQMRPTSSDRTSAAPGSDKTNRFALLFATLDGSVGCIAPVEELTFRR 360
            EFHVGAH+TKF+RL M  TSSDR+ AAPG DKTNRFALLF TLDGS+GCIAP++ELTFRR
Sbjct: 1317 EFHVGAHITKFIRLSMLSTSSDRSGAAPGPDKTNRFALLFGTLDGSIGCIAPLDELTFRR 1376

Query: 361  LQTLQKKMVDAVAHTGGLNPRSFRQFHSNGKAHRPGPDNLIDCELLGHYEMLALEEQLEI 540
            LQ+LQ+K+VDAV H  GLNPRSFRQF S+GK HRPGP++++DCELL H+EML LEEQLEI
Sbjct: 1377 LQSLQRKLVDAVPHVAGLNPRSFRQFRSDGKVHRPGPESIVDCELLSHFEMLPLEEQLEI 1436

Query: 541  AHQIGTTRGQILTNLNDLSVGTSFL 615
            A Q+GTTR QIL+NLNDLS+GTSFL
Sbjct: 1437 AQQVGTTRAQILSNLNDLSLGTSFL 1461


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  341 bits (874), Expect = 2e-91
 Identities = 165/205 (80%), Positives = 187/205 (91%)
 Frame = +1

Query: 1    AQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESWKGSKLLSRA 180
            AQL+LLAKDFG+LDCF+TEFLIDGSTLSL+VSD+ +N+QIFYYAPK SESWKG KLLSRA
Sbjct: 1244 AQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRA 1303

Query: 181  EFHVGAHVTKFLRLQMRPTSSDRTSAAPGSDKTNRFALLFATLDGSVGCIAPVEELTFRR 360
            EFHVGAHVTKFLRLQM  TS DR  A PGSDKTNRFALLF TLDGS+GCIAP++E+TFRR
Sbjct: 1304 EFHVGAHVTKFLRLQMLSTS-DRAGAVPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRR 1362

Query: 361  LQTLQKKMVDAVAHTGGLNPRSFRQFHSNGKAHRPGPDNLIDCELLGHYEMLALEEQLEI 540
            LQ+LQ+K+VDAV H  GLNPR+FR F SNGKAHRPGPD+++DCELL HYEML LEEQLEI
Sbjct: 1363 LQSLQRKLVDAVPHVAGLNPRAFRLFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEI 1422

Query: 541  AHQIGTTRGQILTNLNDLSVGTSFL 615
            AHQ+GTTR QIL+NL+DLS+GTSFL
Sbjct: 1423 AHQVGTTRSQILSNLSDLSLGTSFL 1447


>ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like, partial [Cucumis sativus]
          Length = 741

 Score =  340 bits (871), Expect = 4e-91
 Identities = 166/205 (80%), Positives = 187/205 (91%)
 Frame = +1

Query: 1    AQLTLLAKDFGNLDCFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKTSESWKGSKLLSRA 180
            AQL+LLAKDFG+LDC++TEFLIDGSTLSL VSD+QKN+QIFYYAPK++ESWKG KLLSRA
Sbjct: 538  AQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKSTESWKGQKLLSRA 597

Query: 181  EFHVGAHVTKFLRLQMRPTSSDRTSAAPGSDKTNRFALLFATLDGSVGCIAPVEELTFRR 360
            EFHVGAHVTKFLRLQM  TSSD+  +   SDKTNRFALLF TLDGS+GCIAP++ELTFRR
Sbjct: 598  EFHVGAHVTKFLRLQMLSTSSDKACSTV-SDKTNRFALLFGTLDGSIGCIAPLDELTFRR 656

Query: 361  LQTLQKKMVDAVAHTGGLNPRSFRQFHSNGKAHRPGPDNLIDCELLGHYEMLALEEQLEI 540
            LQ+LQKK+ DAV H GGLNPRSFRQFHSNGK HR GPD+++DCELL HYEML LEEQL+I
Sbjct: 657  LQSLQKKLGDAVPHVGGLNPRSFRQFHSNGKVHRRGPDSIVDCELLCHYEMLPLEEQLDI 716

Query: 541  AHQIGTTRGQILTNLNDLSVGTSFL 615
            AHQIGTTR QIL+NLNDLS+GTSFL
Sbjct: 717  AHQIGTTRSQILSNLNDLSLGTSFL 741