BLASTX nr result

ID: Cimicifuga21_contig00012491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012491
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   266   6e-69
emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]   254   1e-65
ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricin...   239   8e-61
ref|XP_002324377.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59
ref|XP_002308728.1| predicted protein [Populus trichocarpa] gi|2...   232   7e-59

>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
           vinifera]
          Length = 940

 Score =  266 bits (679), Expect = 6e-69
 Identities = 134/256 (52%), Positives = 167/256 (65%), Gaps = 27/256 (10%)
 Frame = -3

Query: 688 MHVSGFSFDLYPLLQFIFTACVIVIGILHLVKSTASKYFVVDANF-----------XXXX 542
           MHVSGFS DL   LQFIFT+ V+ +G+LHLVK+TASKYFVVDANF               
Sbjct: 1   MHVSGFSLDLNWFLQFIFTSFVVALGLLHLVKNTASKYFVVDANFEGGGGGGGGEGGGAG 60

Query: 541 XXXEALLESRKKNRSQMIAV----DGCAVCGKNGIKQCSRCKSVRYCSGTCQSKHWKEGH 374
               ++    + + S M  V    D C VCG  G K+CS CK+VRYCS TCQ+ HWK GH
Sbjct: 61  AGDVSVPGGGRSDSSIMPGVSGTGDSCLVCGNLGTKKCSGCKAVRYCSQTCQATHWKSGH 120

Query: 373 NLKCQELKLSGGINAKLSVSNCGKKAA------------VCDNKFSKELPQLKKVLFPYE 230
             KC++ +LSG  N   S ++ G+KA+            V  +  SK L Q K++LFPY+
Sbjct: 121 KTKCKDFQLSGKANLADSTTHSGRKASGVGVNNSNGIALVPSSGTSKILKQSKEILFPYD 180

Query: 229 DFVKLFNWENSGFRPCGLLNCGNSCYANVVLQCLSCTRPLIAYLLEIGHAIKCKRNDWCF 50
           +FV+ FNW+  GF PCGL+NCGNSC+ANVVLQCL+ TRPL+AYLLE GH  +C+RNDWCF
Sbjct: 181 EFVEFFNWDKPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCF 240

Query: 49  LCELEAHVERTKHSWQ 2
           LCE + HVER  HS Q
Sbjct: 241 LCEFQVHVERASHSPQ 256


>emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]
          Length = 494

 Score =  254 bits (650), Expect = 1e-65
 Identities = 134/272 (49%), Positives = 166/272 (61%), Gaps = 45/272 (16%)
 Frame = -3

Query: 688 MHVSGFSFDLYPLLQFIFTACVIVIGILHLVKSTASKYFVVDANF--------------X 551
           MHVSGFS DL   LQFIFT+ V+ +G+LHLVK+TASKYFVVDANF               
Sbjct: 1   MHVSGFSLDLNWFLQFIFTSFVVALGLLHLVKNTASKYFVVDANFEGGGGGGGGGGGEGG 60

Query: 550 XXXXXXEALLESRKKNRSQMIAV----DGCAVCGKNGIKQCSRCKSVRYCSGTCQSKHWK 383
                  ++    + + S M  V    D C VCG  G K+CS CK+VRYCS TCQ+ HWK
Sbjct: 61  GAGAGDVSVPGGGRSDSSIMPGVSGTGDSCLVCGNLGTKKCSGCKAVRYCSQTCQATHWK 120

Query: 382 EGHNLKCQELKLSGGINAKLSVSNCGKKAA------------VCDNKFSKELPQLKKV-- 245
            GH  KC++ +LSG  N   S ++ G+KA+            V  +  SK L Q K+V  
Sbjct: 121 SGHKTKCKDFQLSGKANLADSTTHSGRKASGVGVNNSNGIALVPSSGTSKILKQSKEVTT 180

Query: 244 -------------LFPYEDFVKLFNWENSGFRPCGLLNCGNSCYANVVLQCLSCTRPLIA 104
                        LFPY++FV+ FNW+  GF PCGL+NCGNSC+ANVVLQCL+ TRPL+A
Sbjct: 181 LSEISNAYLYFQILFPYDEFVEFFNWDKPGFPPCGLINCGNSCFANVVLQCLAYTRPLVA 240

Query: 103 YLLEIGHAIKCKRNDWCFLCELEAHVERTKHS 8
           YLLE GH  +C+RNDWCFLCE + HVER  HS
Sbjct: 241 YLLEKGHRRQCRRNDWCFLCEFQVHVERASHS 272


>ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
           gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase,
           putative [Ricinus communis]
          Length = 632

 Score =  239 bits (609), Expect = 8e-61
 Identities = 122/240 (50%), Positives = 152/240 (63%), Gaps = 13/240 (5%)
 Frame = -3

Query: 688 MHVSGFSFDLYPLLQFIFTACVIVIGILHLVKSTASKYFVVDANFXXXXXXXEALLESRK 509
           MHV G + DL   LQF+FT  +I +G+LHLVK+TASKYF VDA+F         +   R 
Sbjct: 1   MHVGGITVDLNWFLQFVFTLFLIALGLLHLVKNTASKYFEVDAHFEGGA----TITADRN 56

Query: 508 KNRSQMIAVDGCAVCGKNGIKQCSRCKSVRYCSGTCQSKHWKEGHNLKCQEL-KLSGGIN 332
           +  +       CA CG  G K+CSRCKSVRYCS  CQ  HWK GH  KC+ L +++   N
Sbjct: 57  QAPAVPSMESSCANCGNLGTKKCSRCKSVRYCSTECQEVHWKSGHKSKCKNLVRVNSVEN 116

Query: 331 AKLSVSNCGKKAA------------VCDNKFSKELPQLKKVLFPYEDFVKLFNWENSGFR 188
           AK   +N G KA+            V  N  +K + +  +VLFPY+ F+KL+NW    F 
Sbjct: 117 AK---TNFGVKASGLGGRISSGIALVPSNGITKLIKKPTEVLFPYDKFIKLYNWNKGAFP 173

Query: 187 PCGLLNCGNSCYANVVLQCLSCTRPLIAYLLEIGHAIKCKRNDWCFLCELEAHVERTKHS 8
           PCGLLNCGNSC+ANVVLQCL+ TRPL+AYLLE GH  +C+RNDWCFLCE + HVER   S
Sbjct: 174 PCGLLNCGNSCFANVVLQCLTFTRPLVAYLLEEGHQRECRRNDWCFLCEFQVHVERASKS 233


>ref|XP_002324377.1| predicted protein [Populus trichocarpa] gi|222865811|gb|EEF02942.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  235 bits (599), Expect = 1e-59
 Identities = 124/243 (51%), Positives = 152/243 (62%), Gaps = 16/243 (6%)
 Frame = -3

Query: 688 MHVSGFSFDLYPLLQFIFTACVIVIGILHLVKSTASKYFVVDANFXXXXXXXEALLESRK 509
           MHV G + DL  LLQFIFT  +I +G+LHLVK+TASKYF VDANF         +++   
Sbjct: 1   MHVGGITVDLNWLLQFIFTVFIIGLGLLHLVKNTASKYFEVDANFEAAESNH-TVIDPSI 59

Query: 508 KNRSQMIAVDG--CAVCGKNGIKQCSRCKSVRYCSGTCQSKHWKEGHNLKCQELKLSGGI 335
            N++     D   C  CG  G K CSRCKSVRYCS  CQ  HWK GH L+C++ K +   
Sbjct: 60  VNQAMEAEEDSLRCVNCGILGSKTCSRCKSVRYCSQGCQEAHWKAGHKLQCKDFKANSSQ 119

Query: 334 NAKLSVSNCGKKAAVCDNKF--------------SKELPQLKKVLFPYEDFVKLFNWENS 197
            AK   SN G K +   +K               SK   +  KVLFPY++F+KL+N +  
Sbjct: 120 TAK---SNFGFKPSGGGSKSFSSIALVPASGGSNSKPTKKPGKVLFPYDEFIKLYNSDKP 176

Query: 196 GFRPCGLLNCGNSCYANVVLQCLSCTRPLIAYLLEIGHAIKCKRNDWCFLCELEAHVERT 17
            F PCGLLNCGNSC+ANVVLQCL+ TRPL+AYLLE GH  +CK NDWCFLCE ++HVER 
Sbjct: 177 RFPPCGLLNCGNSCFANVVLQCLTYTRPLVAYLLEKGHQTECKHNDWCFLCEFQSHVERA 236

Query: 16  KHS 8
             S
Sbjct: 237 SQS 239


>ref|XP_002308728.1| predicted protein [Populus trichocarpa] gi|222854704|gb|EEE92251.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  232 bits (592), Expect = 7e-59
 Identities = 126/243 (51%), Positives = 151/243 (62%), Gaps = 16/243 (6%)
 Frame = -3

Query: 688 MHVSGFSFDLYPLLQFIFTACVIVIGILHLVKSTASKYFVVDANFXXXXXXXEALLESRK 509
           MHV G + DL  LLQFIFT  VI +G+LHLVK+TASKYF V ANF        A+ +   
Sbjct: 1   MHVGGITVDLNWLLQFIFTVFVIGLGLLHLVKNTASKYFEVGANFEAAESSHTAI-DPNI 59

Query: 508 KNRSQMIAVDG--CAVCGKNGIKQCSRCKSVRYCSGTCQSKHWKEGHNLKCQELKLSGGI 335
            N++     D   C  CG  G K+CSRCKSVRYCS  CQ   WK GH LKC++ KL+   
Sbjct: 60  INQAVEAEEDSSICGNCGGFGTKKCSRCKSVRYCSQRCQEADWKAGHKLKCKDFKLNSSQ 119

Query: 334 NAKLSVSNCGKK------------AAVCDNKFSKELPQLK--KVLFPYEDFVKLFNWENS 197
             +   SN G K            A V  N  S   P  K  KVLFPY++F+KL+N +  
Sbjct: 120 TVR---SNFGFKPSGGGSRSFSNAALVPANGVSNSKPIKKPGKVLFPYDEFIKLYNSDKP 176

Query: 196 GFRPCGLLNCGNSCYANVVLQCLSCTRPLIAYLLEIGHAIKCKRNDWCFLCELEAHVERT 17
            F PCGLLNCGNSC+ANVVLQCL+ TRPL+AYLL+ GH  +CK NDWCFLCE ++HVER 
Sbjct: 177 EFSPCGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECKHNDWCFLCEFQSHVERA 236

Query: 16  KHS 8
             S
Sbjct: 237 SQS 239


Top