BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012488
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320725.1| predicted protein [Populus trichocarpa] gi|2...   257   6e-67
gb|AEZ36039.1| KU80, partial [Nicotiana benthamiana]                  256   2e-66
ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus commu...   250   7e-65
ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subu...   244   5e-63
emb|CBI38852.3| unnamed protein product [Vitis vinifera]              244   5e-63

>ref|XP_002320725.1| predicted protein [Populus trichocarpa] gi|222861498|gb|EEE99040.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score =  257 bits (657), Expect = 6e-67
 Identities = 125/139 (89%), Positives = 131/139 (94%)
 Frame = +1

Query: 1   KIKVWVYKKTSEEKFPTLKKYSDKAPPTDKFATHEVKVDYEYKGAEDPNKVVPPEQRIKG 180
           KIKVWVYKKTSEEKFPTLKKYSDKAPPTD+FATHEVKVDYEYK  EDPNKVVPPEQRIKG
Sbjct: 248 KIKVWVYKKTSEEKFPTLKKYSDKAPPTDRFATHEVKVDYEYKSVEDPNKVVPPEQRIKG 307

Query: 181 YRYGPQVVPISSAELEAIKFKPEKSVKLLGFTNASNIMRHYYMKDVYIFIAEPGNTKAIL 360
           YRYGPQVVPISSAE +A+KFKPEKSVKLLGFT+ASNIMRHYYMKDV +FI EPGN +A L
Sbjct: 308 YRYGPQVVPISSAEWDAVKFKPEKSVKLLGFTDASNIMRHYYMKDVNVFIPEPGNARAAL 367

Query: 361 AVSALVRAMKEMNKVAILR 417
           AVSAL RAMKEMNKVAILR
Sbjct: 368 AVSALARAMKEMNKVAILR 386


>gb|AEZ36039.1| KU80, partial [Nicotiana benthamiana]
          Length = 181

 Score =  256 bits (653), Expect = 2e-66
 Identities = 124/139 (89%), Positives = 133/139 (95%)
 Frame = +1

Query: 1   KIKVWVYKKTSEEKFPTLKKYSDKAPPTDKFATHEVKVDYEYKGAEDPNKVVPPEQRIKG 180
           KIK WVYKKTSEEKFPTLKKYS+KAPPTDKFATHE+KVDYEYK  EDPNKVVPPEQRIKG
Sbjct: 43  KIKGWVYKKTSEEKFPTLKKYSEKAPPTDKFATHEIKVDYEYKSIEDPNKVVPPEQRIKG 102

Query: 181 YRYGPQVVPISSAELEAIKFKPEKSVKLLGFTNASNIMRHYYMKDVYIFIAEPGNTKAIL 360
           +RYGPQVVPISSAELEA+KFKPEKSVKLLGFT+ASNIMRHYY+KDV IFIAEPGN KAIL
Sbjct: 103 FRYGPQVVPISSAELEAVKFKPEKSVKLLGFTDASNIMRHYYLKDVNIFIAEPGNKKAIL 162

Query: 361 AVSALVRAMKEMNKVAILR 417
           A+S+L RAMKEMNKVAI+R
Sbjct: 163 ALSSLARAMKEMNKVAIVR 181


>ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus communis]
           gi|223548903|gb|EEF50392.1| ku P80 DNA helicase,
           putative [Ricinus communis]
          Length = 684

 Score =  250 bits (639), Expect = 7e-65
 Identities = 120/139 (86%), Positives = 132/139 (94%)
 Frame = +1

Query: 1   KIKVWVYKKTSEEKFPTLKKYSDKAPPTDKFATHEVKVDYEYKGAEDPNKVVPPEQRIKG 180
           KIKVWVYKKTSEEKFPTLKK SDKAPPTDK+ATHEVKVDYEYK  EDPNKVVPP+QRIKG
Sbjct: 230 KIKVWVYKKTSEEKFPTLKKRSDKAPPTDKYATHEVKVDYEYKSVEDPNKVVPPDQRIKG 289

Query: 181 YRYGPQVVPISSAELEAIKFKPEKSVKLLGFTNASNIMRHYYMKDVYIFIAEPGNTKAIL 360
           YRYGPQV+PISSAEL+A+KFKPEKSVKLLGFT+A+NI+RHYYMKDV IFIAEPGN +A +
Sbjct: 290 YRYGPQVIPISSAELDAVKFKPEKSVKLLGFTDAANILRHYYMKDVNIFIAEPGNMRATI 349

Query: 361 AVSALVRAMKEMNKVAILR 417
           AVSAL RAMKEM+KVAI+R
Sbjct: 350 AVSALARAMKEMDKVAIVR 368


>ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
           vinifera]
          Length = 690

 Score =  244 bits (623), Expect = 5e-63
 Identities = 117/139 (84%), Positives = 130/139 (93%)
 Frame = +1

Query: 1   KIKVWVYKKTSEEKFPTLKKYSDKAPPTDKFATHEVKVDYEYKGAEDPNKVVPPEQRIKG 180
           +IKVWVYKKT+EE+FPTLK+YSD+APPTDKFATHEVKVD+EYK  E+ +KVVPPEQRIKG
Sbjct: 230 RIKVWVYKKTAEERFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKG 289

Query: 181 YRYGPQVVPISSAELEAIKFKPEKSVKLLGFTNASNIMRHYYMKDVYIFIAEPGNTKAIL 360
           YRYGPQV+PISSAE EA+KFKPEK VKLLGFT+ASN+MRHYYM DV IFIAEP NTKA+L
Sbjct: 290 YRYGPQVIPISSAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPSNTKAML 349

Query: 361 AVSALVRAMKEMNKVAILR 417
           AVSAL RAMKEMNKVAILR
Sbjct: 350 AVSALARAMKEMNKVAILR 368


>emb|CBI38852.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  244 bits (623), Expect = 5e-63
 Identities = 117/139 (84%), Positives = 130/139 (93%)
 Frame = +1

Query: 1   KIKVWVYKKTSEEKFPTLKKYSDKAPPTDKFATHEVKVDYEYKGAEDPNKVVPPEQRIKG 180
           +IKVWVYKKT+EE+FPTLK+YSD+APPTDKFATHEVKVD+EYK  E+ +KVVPPEQRIKG
Sbjct: 213 RIKVWVYKKTAEERFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKG 272

Query: 181 YRYGPQVVPISSAELEAIKFKPEKSVKLLGFTNASNIMRHYYMKDVYIFIAEPGNTKAIL 360
           YRYGPQV+PISSAE EA+KFKPEK VKLLGFT+ASN+MRHYYM DV IFIAEP NTKA+L
Sbjct: 273 YRYGPQVIPISSAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPSNTKAML 332

Query: 361 AVSALVRAMKEMNKVAILR 417
           AVSAL RAMKEMNKVAILR
Sbjct: 333 AVSALARAMKEMNKVAILR 351