BLASTX nr result

ID: Cimicifuga21_contig00012483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012483
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68782.1| hypothetical protein VITISV_018992 [Vitis vinifera]    70   1e-10
ref|XP_002277583.1| PREDICTED: pollen-specific protein SF21 [Vit...    69   4e-10
gb|ACT98264.1| rar [Malus hupehensis]                                  67   1e-09
ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycin...    67   2e-09
gb|ACU14236.1| unknown [Glycine max]                                   67   2e-09

>emb|CAN68782.1| hypothetical protein VITISV_018992 [Vitis vinifera]
          Length = 380

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +1

Query: 202 VFRRRDLTDSLKKLNCKTLIFVGENSPFHSEALHMSCKMDRK 327
           V  R+DLT+SLKKL CKTLIFVGE+SPFH+E++HMS KMDRK
Sbjct: 254 VNERQDLTESLKKLQCKTLIFVGESSPFHAESVHMSAKMDRK 295


>ref|XP_002277583.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera]
           gi|298204892|emb|CBI34199.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +1

Query: 211 RRDLTDSLKKLNCKTLIFVGENSPFHSEALHMSCKMDRK 327
           R+DLT+SLK+L CKTLIFVGE+SPFH+E++HMS KMDRK
Sbjct: 230 RQDLTESLKRLQCKTLIFVGESSPFHAESVHMSAKMDRK 268


>gb|ACT98264.1| rar [Malus hupehensis]
          Length = 225

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 342 KCCDIHVKEFDEFIEIPPCAKGWHNSDPVS 431
           KCCD+HVKEFDEF+ IPPC KGWHN+DPVS
Sbjct: 196 KCCDVHVKEFDEFMSIPPCTKGWHNADPVS 225


>ref|NP_001241419.1| uncharacterized protein LOC100819671 [Glycine max]
           gi|255640086|gb|ACU20334.1| unknown [Glycine max]
           gi|288310306|gb|ADC45392.1| RAR1-2 [Glycine max]
          Length = 224

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 342 KCCDIHVKEFDEFIEIPPCAKGWHNSDPVS 431
           KCCDIHVKEFDEF+ IPPCAKGWHN+DP S
Sbjct: 195 KCCDIHVKEFDEFMSIPPCAKGWHNADPES 224


>gb|ACU14236.1| unknown [Glycine max]
          Length = 224

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 342 KCCDIHVKEFDEFIEIPPCAKGWHNSDPVS 431
           KCCDIHVKEFDEF+ IPPCAKGWHN+DP S
Sbjct: 195 KCCDIHVKEFDEFMSIPPCAKGWHNADPES 224


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