BLASTX nr result

ID: Cimicifuga21_contig00012465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012465
         (2168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochond...   476   e-131
ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putat...   467   e-129
ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloropla...   465   e-128
ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloropla...   413   e-113
ref|NP_190023.2| membrane insertion protein and OxaA/YidC with t...   412   e-112

>ref|XP_004138896.1| PREDICTED: ALBINO3-like protein 3, mitochondrial-like [Cucumis
            sativus]
          Length = 573

 Score =  476 bits (1225), Expect = e-131
 Identities = 251/514 (48%), Positives = 331/514 (64%), Gaps = 12/514 (2%)
 Frame = +3

Query: 417  RFNPTDTYIAFSNFVSFRSLSTNSSEDE--------GIIFDVNSSSELELSDLXXXXXXX 572
            RF+P  + ++     S RS  T S++D         G+     S+ +  + DL       
Sbjct: 52   RFDPHISSLSAFTAFSSRSFWTRSNDDSEFDRIAHYGVESSHLSNDDTGIQDLELGGVVE 111

Query: 573  XXXXXXXXXKWYDPLVSGVISLLDGYHDLTGLPWWIIIASSTXXXXXXXXXXXXXXXXXX 752
                         P +  + S+LDG+H  TG+PWW +IASST                  
Sbjct: 112  EVIGATAVENSILP-IQQLTSILDGFHQYTGMPWWAVIASSTLALRFTLLPILIVQLNKL 170

Query: 753  XXFSDXXXXXXXXXXXXXSGKSYIKQYLLFRKEKQTVGCPSALWGLATVSVQVPCFLLWM 932
                +             SG+SYI Q  LFRKE++ +GCPS LW  A   +QVPCFLLWM
Sbjct: 171  KRIGELFPKLPPPLPPPLSGRSYIDQISLFRKERKAIGCPSFLWFAAYFFIQVPCFLLWM 230

Query: 933  ASIRKMSMDHHPGFDCGGILWFQNLTETPHGILGPIFPLLIAGLHFINVQISFQMAKGGK 1112
             +IRKMS+DH+PGFD GG LWFQNLTE PHG+ GPIFP LIA LHFINVQ+SF+ +   K
Sbjct: 231  VTIRKMSLDHYPGFDYGGALWFQNLTEYPHGVFGPIFPFLIASLHFINVQLSFRKSSLEK 290

Query: 1113 VTGMLSILAKYYKLYLDILTIPLCLIGFCIPQGSLVYWLTNSSFTLVQHLSLRHASMREK 1292
             TG++ ILAKYYKLYL++LT+PL  IG+CIPQGSLVYW+TNSSFT +Q L+L+H ++R K
Sbjct: 291  ETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSLVYWVTNSSFTAIQQLTLQHPAVRSK 350

Query: 1293 LGLPDMD----TRKSGETTNVSTPEISFPVTEMERKVSVQNLSPDELVPLSVQFLARGNK 1460
            LGLP  D    T    ET N    +I    T   +K+SV+ LSP EL+ LSVQ L++G K
Sbjct: 351  LGLPSRDAPVGTTTLRETNNPG--KIPLETTTKWKKISVEKLSPKELLALSVQLLSKGQK 408

Query: 1461 DRAVPLLRLALKKDPEYVRALVLLGQSLMQQEMLTEAIECLECAITKLSYGGQPTKDEDV 1640
            ++A+PLLR AL K+PEYVRALV++GQ+L+Q     EA   LE AI+KL   G PT+ E V
Sbjct: 409  EKAIPLLRQALNKEPEYVRALVVMGQTLLQNAQPAEATVYLERAISKLFLSGHPTEVEGV 468

Query: 1641 DLLILAYTWAGVTSVKQGKIVAGLEHLQKIADMREPEDPRGKAHFFDGLVMLASTLFSEG 1820
            DLLILA  WAGV  ++QGK+V G+ HL+++A+++EPE+P+ KAH++DGLV+LAS L++EG
Sbjct: 469  DLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYYDGLVLLASALYNEG 528

Query: 1821 RKDEAEKHLRRAVAYNYDAYNIYLQQCLEDSDSV 1922
            RK EA K+L+ AVAYN  AY  YL QC +D+D +
Sbjct: 529  RKAEATKYLKSAVAYN-PAYKEYLDQCEDDNDKL 561


>ref|XP_002512617.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
            gi|223548578|gb|EEF50069.1| cytochrome oxidase biogenesis
            protein, putative [Ricinus communis]
          Length = 548

 Score =  467 bits (1201), Expect = e-129
 Identities = 226/431 (52%), Positives = 306/431 (70%), Gaps = 1/431 (0%)
 Frame = +3

Query: 627  VISLLDGYHDLTGLPWWIIIASSTXXXXXXXXXXXXXXXXXXXXFSDXXXXXXXXXXXXX 806
            ++S+LD +HDL+GLPWW++IAS+T                     S+             
Sbjct: 106  LVSVLDEFHDLSGLPWWLVIASATVAMRVTLFPLLVLQLHKLKKISELFPKLPPPFPPPL 165

Query: 807  SGKSYIKQYLLFRKEKQTVGCPSALWGLATVSVQVPCFLLWMASIRKMSMDHHPGFDCGG 986
            SGKS++ Q  LF KE++ +GCPS LW LA VS QVPCFLLWM SIR+MS+DHHPGFDCGG
Sbjct: 166  SGKSFVDQISLFHKERRALGCPSYLWFLAYVSAQVPCFLLWMTSIRRMSLDHHPGFDCGG 225

Query: 987  ILWFQNLTETPHGILGPIFPLLIAGLHFINVQISFQMAKGGKVTGMLSILAKYYKLYLDI 1166
             LWFQNLTE PHGI GPIFPLLIA LH+IN+Q++F+     K TG+LS+LAKYYKLYLD+
Sbjct: 226  TLWFQNLTEYPHGIAGPIFPLLIACLHYINIQLAFEKFSVQKTTGLLSLLAKYYKLYLDL 285

Query: 1167 LTIPLCLIGFCIPQGSLVYWLTNSSFTLVQHLSLRHASMREKLGLPDMDT-RKSGETTNV 1343
            LT+PL  IG+CIPQGSLVYW+TNSS +++Q +SL+H ++R KLGLP  D    S ++  +
Sbjct: 286  LTLPLFFIGYCIPQGSLVYWVTNSSLSVIQQMSLKHPAVRAKLGLPAKDAPAASADSEEM 345

Query: 1344 STPEISFPVTEMERKVSVQNLSPDELVPLSVQFLARGNKDRAVPLLRLALKKDPEYVRAL 1523
             +P+ S        KV V+NL+P +L+ +SVQ L+  +++RA+PLL+LAL+KDP Y+ AL
Sbjct: 346  GSPQASLDAPSKNGKVPVENLNPKQLLAISVQLLSNQHRERAIPLLQLALQKDPNYIGAL 405

Query: 1524 VLLGQSLMQQEMLTEAIECLECAITKLSYGGQPTKDEDVDLLILAYTWAGVTSVKQGKIV 1703
            V++GQ+L+Q+EM  EA + LE AI+KL   G PT+ +DVDLLILA  WAGV  ++QG+  
Sbjct: 406  VVMGQTLLQKEMYAEARDHLERAISKLFLAGNPTEVKDVDLLILASQWAGVACIRQGENA 465

Query: 1704 AGLEHLQKIADMREPEDPRGKAHFFDGLVMLASTLFSEGRKDEAEKHLRRAVAYNYDAYN 1883
             G+ H +++A++ EPEDP+ K H+FD L+ LAS L++EGRK EA  +LR AVA+N  A+ 
Sbjct: 466  EGVAHFERVANLEEPEDPKCKVHYFDTLIFLASALYNEGRKAEAANYLRLAVAFN-PAFK 524

Query: 1884 IYLQQCLEDSD 1916
              L+QC  D +
Sbjct: 525  ELLEQCENDEE 535


>ref|XP_002273357.1| PREDICTED: ALBINO3-like protein 2, chloroplastic [Vitis vinifera]
            gi|297735304|emb|CBI17666.3| unnamed protein product
            [Vitis vinifera]
          Length = 572

 Score =  465 bits (1196), Expect = e-128
 Identities = 239/463 (51%), Positives = 313/463 (67%), Gaps = 25/463 (5%)
 Frame = +3

Query: 612  PLVSGVISLLDGYHDLTGLPWWIIIASSTXXXXXXXXXXXXXXXXXXXXFSDXXXXXXXX 791
            P V  ++SLLDGYHD+TG PWWIIIASST                     ++        
Sbjct: 102  PPVRFLVSLLDGYHDVTGWPWWIIIASSTLALRIALFPILVLQLKKMKRIAELLPKLPPP 161

Query: 792  XXXXXSGKSYIKQYLLFRKEKQTVGCPSALWGLATVSVQVPCFLLWMASIRKMSMDHHPG 971
                 SG+SY  Q  LFRKEK+ +GCPS LW LA++S QVPCF+LWM SIR MS+DHHPG
Sbjct: 162  LPPPLSGRSYFDQISLFRKEKRAIGCPSFLWFLASLSTQVPCFILWMMSIRWMSLDHHPG 221

Query: 972  FDCGGILWFQNLTETPHGILGPIFPLLIAGLHFINVQISFQMAKGGKVTGMLSILAKYYK 1151
            FD GG LWFQNLTE P+G+LGPIFP+LI+GLHFINVQISF  +  G+V G+L +LAKYYK
Sbjct: 222  FDSGGALWFQNLTEFPNGVLGPIFPILISGLHFINVQISFSTSSVGQVPGLLGLLAKYYK 281

Query: 1152 LYLDILTIPLCLIGFCIPQGSLVYWLTNSSFTLVQHLSLRHASMREKLGLPD-------- 1307
             YL+ILT+P+   GF IPQGSLVYW+TNSS + +Q L++RH ++R KLGLPD        
Sbjct: 282  FYLEILTVPIFFTGFYIPQGSLVYWVTNSSLSAIQQLTIRHPTVRAKLGLPDKQAPNAAA 341

Query: 1308 --MDTRKSG-----------ETTNVSTPEI----SFPVTEMERKVSVQNLSPDELVPLSV 1436
              M T   G              +VS  E+    S      + ++ +++LSP +L+ LSV
Sbjct: 342  KEMHTPGEGSLGPPTKQQYISPESVSPQELPGIKSMYPRRKQHQIPIESLSPRDLIALSV 401

Query: 1437 QFLARGNKDRAVPLLRLALKKDPEYVRALVLLGQSLMQQEMLTEAIECLECAITKLSYGG 1616
            Q L++G+KD A+P +R+AL KDP YVRALV++GQ+L+Q+E + EA + LE A+TKL   G
Sbjct: 402  QILSKGDKDGAIPFIRMALDKDPNYVRALVVMGQTLLQKEQVEEASDYLERAVTKLFLIG 461

Query: 1617 QPTKDEDVDLLILAYTWAGVTSVKQGKIVAGLEHLQKIADMREPEDPRGKAHFFDGLVML 1796
             PT+DE VDL+ILA  WAG   V+QGK   GL HL++IA+++EP++P+ KAH+FDGL++L
Sbjct: 462  HPTEDE-VDLMILASQWAGAACVRQGKTAEGLVHLERIANLKEPDEPKSKAHYFDGLLLL 520

Query: 1797 ASTLFSEGRKDEAEKHLRRAVAYNYDAYNIYLQQCLEDSDSVH 1925
            ASTL+ EGR  EA KHLR+A AYN  AY  YL++C  +   V+
Sbjct: 521  ASTLYREGRNAEAAKHLRKAAAYN-PAYKEYLEECEREDGFVN 562


>ref|XP_004155151.1| PREDICTED: ALBINO3-like protein 2, chloroplastic-like [Cucumis
            sativus]
          Length = 366

 Score =  413 bits (1062), Expect = e-113
 Identities = 204/344 (59%), Positives = 263/344 (76%), Gaps = 4/344 (1%)
 Frame = +3

Query: 903  VQVPCFLLWMASIRKMSMDHHPGFDCGGILWFQNLTETPHGILGPIFPLLIAGLHFINVQ 1082
            +QVPCFLLWM +IRKMS+DH+PGFD GG LWFQNLTE PHG+ GPIFP LIA LHFINVQ
Sbjct: 14   MQVPCFLLWMVTIRKMSLDHYPGFDYGGALWFQNLTEYPHGVFGPIFPFLIASLHFINVQ 73

Query: 1083 ISFQMAKGGKVTGMLSILAKYYKLYLDILTIPLCLIGFCIPQGSLVYWLTNSSFTLVQHL 1262
            +SF+ +   K TG++ ILAKYYKLYL++LT+PL  IG+CIPQGSLVYW+TNSSFT +Q L
Sbjct: 74   LSFRKSSLEKETGIIGILAKYYKLYLNLLTVPLFFIGYCIPQGSLVYWVTNSSFTAIQQL 133

Query: 1263 SLRHASMREKLGLPDMD----TRKSGETTNVSTPEISFPVTEMERKVSVQNLSPDELVPL 1430
            +L+H ++R KLGLP  D    T    ET N    +I    T   +K+SV+ LSP EL+ L
Sbjct: 134  TLQHPAVRSKLGLPSRDAPVGTTTLRETNNPG--KIPLETTTKWKKISVEKLSPKELLAL 191

Query: 1431 SVQFLARGNKDRAVPLLRLALKKDPEYVRALVLLGQSLMQQEMLTEAIECLECAITKLSY 1610
            SVQ L++G K++A+PLLR AL K+PEYVRALV++GQ+L+Q     EA   LE AI+KL  
Sbjct: 192  SVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNAQPAEATVYLERAISKLFL 251

Query: 1611 GGQPTKDEDVDLLILAYTWAGVTSVKQGKIVAGLEHLQKIADMREPEDPRGKAHFFDGLV 1790
             G PT+ E VDLLILA  WAGV  ++QGK+V G+ HL+++A+++EPE+P+ KAH++DGLV
Sbjct: 252  SGHPTEVEGVDLLILASQWAGVAFIRQGKMVEGIAHLERVANLKEPEEPKSKAHYYDGLV 311

Query: 1791 MLASTLFSEGRKDEAEKHLRRAVAYNYDAYNIYLQQCLEDSDSV 1922
            +LAS L++EGRK EA K+L+ AVAYN  AY  YL QC +D+D +
Sbjct: 312  LLASALYNEGRKAEATKYLKSAVAYN-PAYKEYLDQCEDDNDKL 354


>ref|NP_190023.2| membrane insertion protein and OxaA/YidC with tetratricopeptide
            repeat domain-containing protein [Arabidopsis thaliana]
            gi|122242629|sp|Q0WUC5.1|ALB33_ARATH RecName:
            Full=ALBINO3-like protein 3, mitochondrial; Flags:
            Precursor gi|110742724|dbj|BAE99273.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332644376|gb|AEE77897.1| membrane insertion protein
            and OxaA/YidC with tetratricopeptide repeat
            domain-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  412 bits (1060), Expect = e-112
 Identities = 228/516 (44%), Positives = 323/516 (62%), Gaps = 16/516 (3%)
 Frame = +3

Query: 411  QSRFNPTDTYIAFSNFVSFR--SLSTNSSEDEGIIFDVNSSS------ELELSD----LX 554
            QSRF  T + +  S    FR  S++   S D G+ FD + +S       LE  D    L 
Sbjct: 40   QSRFFSTPSDLD-SELTRFRDDSIAGVGSNDHGLEFDDSIASLGSNGHGLEFGDSIGSLG 98

Query: 555  XXXXXXXXXXXXXXXKWYDPLVSGVISLLDGYHDLTGLPWWIIIASSTXXXXXXXXXXXX 734
                             YD L   VISLLD YHD+TGLPWW++IA+ST            
Sbjct: 99   SNGYGLEFGDLSQDLSNYDYLTQPVISLLDSYHDITGLPWWVVIATSTVAFRTALLPILI 158

Query: 735  XXXXXXXXFSDXXXXXXXXXXXXXSGKSYIKQYLLFRKEKQTVGCPSALWGLATVSVQVP 914
                     S              SG+S + Q  LFRKE++ +GCPS LW  A  S+Q+ 
Sbjct: 159  LQRKQTKRISQFLPKLPHFWPPQGSGRSVLDQLKLFRKERKDIGCPSFLWVPAYFSIQIS 218

Query: 915  CFLLWMASIRKMSMDHHPGFDCGGILWFQNLTETPHGILGPIFPLLIAGLHFINVQISFQ 1094
            CF LW+ SIR+MS+DHHPGFD GG LWFQNLTE P+G+ GP+FP LIAGLH+ N QI+F 
Sbjct: 219  CFFLWITSIRRMSLDHHPGFDSGGALWFQNLTEIPNGLYGPLFPFLIAGLHYTNTQITFT 278

Query: 1095 MAKGGKVTGMLSILAKYYKLYLDILTIPLCLIGFCIPQGSLVYWLTNSSFTLVQHLSLRH 1274
             +   KV    + LAK YK +L++LT  L  + F +PQGSL+YW TN SF++ Q   L H
Sbjct: 279  ASSVHKV-DKFTELAKAYKTFLNLLTCALYFLSFQMPQGSLLYWATNLSFSIAQQSILNH 337

Query: 1275 ASMREKLGLPDMDT--RKSGE--TTNVSTPEISFPVTEMERKVSVQNLSPDELVPLSVQF 1442
              +  KLGL   D+  +++G    TN++  +++ P +   R +SV NL+P ELV LS ++
Sbjct: 338  PVVSAKLGLQANDSVQKEAGNPILTNINEGKLTDP-SSKGRLISVHNLTPKELVALSAKY 396

Query: 1443 LARGNKDRAVPLLRLALKKDPEYVRALVLLGQSLMQQEMLTEAIECLECAITKLSYGGQP 1622
            L+ G+KD+++PLLRLAL+KDPEY++A+++LGQ+L Q++   EA +CLE A +KL     P
Sbjct: 397  LSGGHKDKSIPLLRLALEKDPEYLQAMIILGQALYQKDQFAEAAKCLEQAASKL-LDTSP 455

Query: 1623 TKDEDVDLLILAYTWAGVTSVKQGKIVAGLEHLQKIADMREPEDPRGKAHFFDGLVMLAS 1802
            T+ E+VDLLI+A  WAGV++++QGK   G+ HL+++A+M+EP+DP+ KAH+ D LV+ +S
Sbjct: 456  TEVEEVDLLIVASQWAGVSNIRQGKTSEGITHLERVANMKEPDDPKSKAHYLDALVLYSS 515

Query: 1803 TLFSEGRKDEAEKHLRRAVAYNYDAYNIYLQQCLED 1910
             +F+EGR++EA K+LRR VAY+  +++  L+QC ED
Sbjct: 516  AIFNEGRREEAAKYLRRVVAYD-PSFSELLKQCEED 550


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