BLASTX nr result

ID: Cimicifuga21_contig00012454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012454
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30774.3| unnamed protein product [Vitis vinifera]              209   5e-52
ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
gb|ACU23441.1| unknown [Glycine max]                                  198   1e-48
ref|XP_002526919.1| conserved hypothetical protein [Ricinus comm...   196   5e-48
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi...   195   7e-48

>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  209 bits (532), Expect = 5e-52
 Identities = 102/123 (82%), Positives = 110/123 (89%)
 Frame = -1

Query: 721 QGLTMGTYDILLLAFDMEQRTDEAESLWSMILHTHTRSVSKQLFSRMISLYDHRHMPDKI 542
           QG TMGTYD LLLAFDM+ R DEAESLW+MILHTHTRS+SKQLFSRMISLYDH  M DK+
Sbjct: 151 QGATMGTYDTLLLAFDMDWRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDMRDKV 210

Query: 541 IEVFADMEELGVKPDEDTVRRVAHAFKKLGDEDKQKLVLKKYLNKWKYIHFNGERVKVQR 362
           IEVFADMEELGVKPDEDTVRRVA AF+ LG EDKQKLVLKKY  KWKYIHFNGERV+V+R
Sbjct: 211 IEVFADMEELGVKPDEDTVRRVACAFQTLGQEDKQKLVLKKYQCKWKYIHFNGERVRVRR 270

Query: 361 DVY 353
           D +
Sbjct: 271 DAW 273


>ref|XP_003546058.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Glycine max]
          Length = 288

 Score =  198 bits (503), Expect = 1e-48
 Identities = 93/123 (75%), Positives = 111/123 (90%)
 Frame = -1

Query: 721 QGLTMGTYDILLLAFDMEQRTDEAESLWSMILHTHTRSVSKQLFSRMISLYDHRHMPDKI 542
           QG TMGTYD LLLAFDM++R DEAESLW+MI+H H RSVSK+LFSRMISLYDH +MPDKI
Sbjct: 159 QGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHMRSVSKRLFSRMISLYDHHNMPDKI 218

Query: 541 IEVFADMEELGVKPDEDTVRRVAHAFKKLGDEDKQKLVLKKYLNKWKYIHFNGERVKVQR 362
           I+VFADMEEL +KPDEDTVRRVA AF++LGDE+K+KLV+K+Y  KWKYIHFNGERV+V+ 
Sbjct: 219 IDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVRT 278

Query: 361 DVY 353
           + +
Sbjct: 279 EAW 281


>gb|ACU23441.1| unknown [Glycine max]
          Length = 288

 Score =  198 bits (503), Expect = 1e-48
 Identities = 93/123 (75%), Positives = 111/123 (90%)
 Frame = -1

Query: 721 QGLTMGTYDILLLAFDMEQRTDEAESLWSMILHTHTRSVSKQLFSRMISLYDHRHMPDKI 542
           QG TMGTYD LLLAFDM++R DEAESLW+MI+H H RSVSK+LFSRMISLYDH +MPDKI
Sbjct: 159 QGATMGTYDTLLLAFDMDKRVDEAESLWNMIIHAHLRSVSKRLFSRMISLYDHHNMPDKI 218

Query: 541 IEVFADMEELGVKPDEDTVRRVAHAFKKLGDEDKQKLVLKKYLNKWKYIHFNGERVKVQR 362
           I+VFADMEEL +KPDEDTVRRVA AF++LGDE+K+KLV+K+Y  KWKYIHFNGERV+V+ 
Sbjct: 219 IDVFADMEELRLKPDEDTVRRVARAFRELGDEEKRKLVIKQYGLKWKYIHFNGERVRVRT 278

Query: 361 DVY 353
           + +
Sbjct: 279 EAW 281


>ref|XP_002526919.1| conserved hypothetical protein [Ricinus communis]
           gi|223533738|gb|EEF35472.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  196 bits (497), Expect = 5e-48
 Identities = 91/115 (79%), Positives = 104/115 (90%)
 Frame = -1

Query: 721 QGLTMGTYDILLLAFDMEQRTDEAESLWSMILHTHTRSVSKQLFSRMISLYDHRHMPDKI 542
           QG TMGTYD LLLAFDM+ R DEA SLW+MILHTH RS+SK+LFSRMISLYDH +MPD I
Sbjct: 100 QGTTMGTYDTLLLAFDMDNRVDEAASLWNMILHTHVRSISKRLFSRMISLYDHHNMPDGI 159

Query: 541 IEVFADMEELGVKPDEDTVRRVAHAFKKLGDEDKQKLVLKKYLNKWKYIHFNGER 377
           IE+FADMEELGV+PDEDTVRRVA AFK+LG E+KQKLVLK+Y+++WKYIHF GER
Sbjct: 160 IEIFADMEELGVRPDEDTVRRVARAFKELGQEEKQKLVLKRYMSRWKYIHFKGER 214


>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Cucumis sativus]
          Length = 270

 Score =  195 bits (496), Expect = 7e-48
 Identities = 91/121 (75%), Positives = 107/121 (88%)
 Frame = -1

Query: 721 QGLTMGTYDILLLAFDMEQRTDEAESLWSMILHTHTRSVSKQLFSRMISLYDHRHMPDKI 542
           QG TMGTYD LLLAFDM++R DEAESLW+MILHTHTRS+SK++FSRMISLY+H  + DKI
Sbjct: 143 QGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKI 202

Query: 541 IEVFADMEELGVKPDEDTVRRVAHAFKKLGDEDKQKLVLKKYLNKWKYIHFNGERVKVQR 362
           IE+FADMEELGVKPDEDTVRRV  AF+KLG ED +K+V K+Y  +WKYIHF GERV+V+R
Sbjct: 203 IEIFADMEELGVKPDEDTVRRVCRAFQKLGQEDNRKMVYKRYSCQWKYIHFKGERVRVRR 262

Query: 361 D 359
           D
Sbjct: 263 D 263


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