BLASTX nr result
ID: Cimicifuga21_contig00012413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012413
(869 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 53 9e-13
ref|XP_004153049.1| PREDICTED: uncharacterized mitochondrial pro... 48 3e-11
emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera] 49 4e-11
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera] 49 1e-10
emb|CAN60274.1| hypothetical protein VITISV_024841 [Vitis vinifera] 49 1e-10
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 52.8 bits (125), Expect(2) = 9e-13
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 356 VVLLSQFMNAPCSAHMNVANRVLRYLKGSVGKG--YFFLLIALSICMGFVILIGLDAMPL 529
V ++SQF+N+PC H N R+L+Y+KGS GKG Y +C G +
Sbjct: 1186 VSVVSQFLNSPCEDHWNAVIRILKYIKGSPGKGLLYGHNNHTKVVCYSDADWAGSPSDR- 1244
Query: 530 CHSTSGYCTSLDSNPLPW 583
STSGYC S+ N + W
Sbjct: 1245 -RSTSGYCVSIGDNLISW 1261
Score = 47.0 bits (110), Expect(2) = 9e-13
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 112 LGYFLGIEVAGSHQGIFLIRANISLLEYS*RCWVAWSSSL*FPME-NI*LAPTDGVSLLN 288
L YFLGIEVA S+ GI + + +L + + S S+ PM+ N+ L P G L +
Sbjct: 1103 LRYFLGIEVAQSNTGIVISQRKYAL-DILEEIGLMNSKSVDTPMDPNVKLLPNQGEPLSD 1161
Query: 289 PWPCRCLVGSLIYLTVTQP 345
P R LVG L YLTVT+P
Sbjct: 1162 PEKYRRLVGKLNYLTVTRP 1180
>ref|XP_004153049.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Cucumis sativus]
Length = 354
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 118 YFLGIEVAGSHQGIFLIRANISLLEYS*RCWVAWSSSL*FPME-NI*LAPTDGVSLLNPW 294
YFLG+E++ G +L +A + S R + S++ P++ N+ L P DGV L +P
Sbjct: 158 YFLGLEISFVSNGYYLSQAKYASDLLS-RSSITDSTTSSTPLDPNVRLTPFDGVPLDDPT 216
Query: 295 PCRCLVGSLIYLTVTQP 345
R LVGSLIYLTVT+P
Sbjct: 217 LYRQLVGSLIYLTVTRP 233
Score = 46.6 bits (109), Expect(2) = 3e-11
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 347 IVFVV-LLSQFMNAPCSAHMNVANRVLRYLKGSVGKGYFFLLIALSICMGFVILIGLDAM 523
I FVV ++SQFM A + H V R+LRY+KG++G G F + + GF +
Sbjct: 235 IAFVVHIVSQFMAASRTIHFTVVLRILRYIKGTLGHGLHFSSQSSLVLSGFSDADWAEDP 294
Query: 524 PLCHSTSGYCTSLDSNPLPW 583
ST+GYC L + W
Sbjct: 295 TDRRSTTGYCFYLGDALISW 314
>emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera]
Length = 1168
Score = 48.5 bits (114), Expect(2) = 4e-11
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 112 LGYFLGIEVAGSHQGIFLIRANISLLEYS*RCWVAWSSSL*FPME-NI*LAPTDGVSLLN 288
L YFLG+E+ S G+++ +A + S + + S ++ P+E N L P+ G L N
Sbjct: 886 LSYFLGLEITHSTYGLYITQAKYASDLLS-QAGLTDSKNVDTPVELNAHLTPSGGKPLSN 944
Query: 289 PWPCRCLVGSLIYLTVTQP 345
P R LVGSL+YLTVT+P
Sbjct: 945 PSLYRRLVGSLVYLTVTRP 963
Score = 45.8 bits (107), Expect(2) = 4e-11
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 365 LSQFMNAPCSAHMNVANRVLRYLKGSVGKGYFFLLIALSICMGFVILIGLDAMPLCHSTS 544
+SQ+++AP S H R+LRYLKG++ G F+ + + F ST+
Sbjct: 972 VSQYLSAPRSTHYAAVLRILRYLKGTIFHGLFYSAQSPLVLRAFSDADWAGDPTDRRSTT 1031
Query: 545 GYCTSLDSNPLPW 583
GYC LDS+ + W
Sbjct: 1032 GYCFLLDSSLISW 1044
>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
Length = 2471
Score = 48.9 bits (115), Expect(2) = 1e-10
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 112 LGYFLGIEVAGSHQGIFLIRANISLLEYS*RCWVAWSSSL*FPME-NI*LAPTDGVSLLN 288
L YFLG+E+ S G+++ +A + S + + S ++ P+E N L P+ G L N
Sbjct: 1346 LSYFLGLEITHSTDGLYITQAKYASDLLS-QAGLTDSKNVDTPVELNAHLTPSGGKPLSN 1404
Query: 289 PWPCRCLVGSLIYLTVTQP 345
P R LVGSL+YLTVT+P
Sbjct: 1405 PSLYRRLVGSLVYLTVTRP 1423
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 365 LSQFMNAPCSAHMNVANRVLRYLKGSVGKGYFFLLIALSICMGFVILIGLDAMPLCHSTS 544
+SQ+++AP S H R+LRYLKG++ G F+ + + F ST+
Sbjct: 1432 VSQYLSAPRSTHYATVLRILRYLKGTIFHGLFYSAQSPLVLRAFSDADWAGDPTNRRSTT 1491
Query: 545 GYCTSLDSNPLPW 583
GYC L S+ + W
Sbjct: 1492 GYCFLLGSSLISW 1504
>emb|CAN60274.1| hypothetical protein VITISV_024841 [Vitis vinifera]
Length = 1573
Score = 48.9 bits (115), Expect(2) = 1e-10
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +2
Query: 356 VVLLSQFMNAPCSAHMNVANRVLRYLKGSVGKGYFFLLIALSICMGFVILIGLDAMPLCH 535
V ++SQF+ +PC +H + R+LRY+K + G+G + + +G+ + +
Sbjct: 903 VSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENRGHTQVVGYTDADWVGSPTDRR 962
Query: 536 STSGYCTSLDSNPLPW 583
STSGYC + N + W
Sbjct: 963 STSGYCVFIGGNLISW 978
Score = 43.5 bits (101), Expect(2) = 1e-10
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Frame = +1
Query: 1 MMRSSRLS**YHCYRDLSYCLLMISRIF-YINNSTIKI------LGYFLGIEVAGSHQGI 159
M+RS+ ++ + L C+ +I + + TI++ L YFLGIE+A S+ G+
Sbjct: 776 MLRSTSDHSVFYHHNSLGQCIYLIVYVDDIVITGTIRMTKDLGKLKYFLGIEIAQSNSGV 835
Query: 160 FLIRANISLLEYS*RCWVAWSSSL*FPME-NI*LAPTDGVSLLNPWPCRCLVGSLIYLTV 336
L + +L + + + PM+ N+ L P G L +P R LVG L YLT+
Sbjct: 836 VLSQRKYAL-DILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTI 894
Query: 337 TQP 345
T+P
Sbjct: 895 TRP 897