BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012401
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   602   e-170
ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   600   e-169
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li...   597   e-168
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V...   594   e-167
ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-li...   593   e-167

>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
            gi|449494241|ref|XP_004159490.1| PREDICTED: replication
            factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  602 bits (1551), Expect = e-170
 Identities = 295/320 (92%), Positives = 315/320 (98%)
 Frame = -2

Query: 1247 YEIPWVEKFRPTKVSDVVGNEDAVSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1068
            Y+IPWVEK+RP KV+D+VGNEDAVSRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11   YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 70

Query: 1067 LGANCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 888
            LG N KEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMT+GAQQA
Sbjct: 71   LGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQA 130

Query: 887  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVPY 708
            LRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLM+VIQAEKVPY
Sbjct: 131  LRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPY 190

Query: 707  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 528
            VPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQ+NVFKVCDQPHPLHVKN+VRN+LEG
Sbjct: 191  VPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEG 250

Query: 527  KFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 348
            KFDDAC GL+QLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS
Sbjct: 251  KFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 310

Query: 347  LLQLCGLLAKLSLVRETAKA 288
             LQLCGLLAKLS+VRETAKA
Sbjct: 311  YLQLCGLLAKLSMVRETAKA 330


>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223549638|gb|EEF51126.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 333

 Score =  600 bits (1548), Expect = e-169
 Identities = 294/320 (91%), Positives = 315/320 (98%)
 Frame = -2

Query: 1247 YEIPWVEKFRPTKVSDVVGNEDAVSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1068
            Y++PWVEK+RP+K+ D+VGNEDAVSRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 13   YDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 72

Query: 1067 LGANCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 888
            LG N KE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQA
Sbjct: 73   LGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQA 132

Query: 887  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVPY 708
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL+IV+QAEKVPY
Sbjct: 133  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPY 192

Query: 707  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 528
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVR+++EG
Sbjct: 193  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEG 252

Query: 527  KFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 348
            K+DDAC+GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS
Sbjct: 253  KYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 312

Query: 347  LLQLCGLLAKLSLVRETAKA 288
             LQLCGLLAKL+LVR+TA+A
Sbjct: 313  YLQLCGLLAKLALVRDTARA 332


>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 331

 Score =  597 bits (1538), Expect = e-168
 Identities = 294/322 (91%), Positives = 315/322 (97%), Gaps = 1/322 (0%)
 Frame = -2

Query: 1247 YEIPWVEKFRPTKVSDVVGNEDAVSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1068
            Y++PWVEK+RP+KV+D+VGNEDAVSRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 10   YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 69

Query: 1067 LGA-NCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 891
            LG  NCKE VLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKI+ILDEADSMT+GAQQ
Sbjct: 70   LGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 129

Query: 890  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVP 711
            ALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLM+V+QAEKVP
Sbjct: 130  ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVP 189

Query: 710  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 531
            YVPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMVRN++E
Sbjct: 190  YVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIE 249

Query: 530  GKFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 351
            G FD+AC+GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG
Sbjct: 250  GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 309

Query: 350  SLLQLCGLLAKLSLVRETAKAV 285
            S LQLCGLLAKLSLVRETAKAV
Sbjct: 310  SYLQLCGLLAKLSLVRETAKAV 331


>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
            gi|297742576|emb|CBI34725.3| unnamed protein product
            [Vitis vinifera]
          Length = 330

 Score =  594 bits (1532), Expect = e-167
 Identities = 292/320 (91%), Positives = 312/320 (97%)
 Frame = -2

Query: 1247 YEIPWVEKFRPTKVSDVVGNEDAVSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1068
            Y++PWVEK+RPTKV+D+VGNED VSRLQVIARDGN+PNLIL+GPPGTGKTTS+LALAHEL
Sbjct: 10   YDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAHEL 69

Query: 1067 LGANCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 888
            LGAN +E VLELNASDDRGIDVVRNKIKMFAQKKVTLP G HKI+ILDEADSMT+GAQQA
Sbjct: 70   LGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQQA 129

Query: 887  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVPY 708
            LRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSDQEILGRLM+V++AEKVP+
Sbjct: 130  LRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKVPF 189

Query: 707  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 528
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRN+LEG
Sbjct: 190  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEG 249

Query: 527  KFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 348
            KFDDAC GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS
Sbjct: 250  KFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 309

Query: 347  LLQLCGLLAKLSLVRETAKA 288
             LQLCGLLAKL++VRETAKA
Sbjct: 310  YLQLCGLLAKLAVVRETAKA 329


>ref|XP_003549857.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 332

 Score =  593 bits (1530), Expect = e-167
 Identities = 293/322 (90%), Positives = 314/322 (97%), Gaps = 1/322 (0%)
 Frame = -2

Query: 1247 YEIPWVEKFRPTKVSDVVGNEDAVSRLQVIARDGNLPNLILTGPPGTGKTTSILALAHEL 1068
            Y++PWVEK+RP+KV+D+VGNEDAVSRLQVIARDGN+PNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11   YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 70

Query: 1067 LGA-NCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 891
            LG  NCKE VLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKI+ILDEADSMT+GAQQ
Sbjct: 71   LGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 130

Query: 890  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIQAEKVP 711
            ALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLM+V+QAEKVP
Sbjct: 131  ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVP 190

Query: 710  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 531
            YVPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMV N++E
Sbjct: 191  YVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVCNVIE 250

Query: 530  GKFDDACAGLKQLYNLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 351
            G FD+AC+GLKQLY+LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG
Sbjct: 251  GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310

Query: 350  SLLQLCGLLAKLSLVRETAKAV 285
            S LQLCGLLAKLSLVRETAKAV
Sbjct: 311  SYLQLCGLLAKLSLVRETAKAV 332