BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012397
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517927.1| pentatricopeptide repeat-containing protein,...   199   1e-48
ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containi...   177   3e-42
ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containi...   170   4e-40
emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]   170   4e-40
ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containi...   166   8e-39

>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  199 bits (505), Expect = 1e-48
 Identities = 96/182 (52%), Positives = 134/182 (73%)
 Frame = +3

Query: 30  CMITSLEKLNDIEGAEKIWEEWESRGISNDFRVLNRLVSVYCTRRLFEKAEMLVQKATQK 209
           CMI+SLEK++DIEGAE+I+EEWES+ +  DFRVLN+L+  YC + L+ KAE   +KA + 
Sbjct: 330 CMISSLEKVDDIEGAERIFEEWESQCMMYDFRVLNKLLLAYCRKGLYTKAEAAFKKAAE- 388

Query: 210 VAESGRSPYPSTWNILAMGYLSDKQMLKGVEMLKKALLVGRQGWKPSSVTITSCLEYFEV 389
               GR+PY STW  +AM Y+   QM K VEMLKKA+ V R+GWKP+ +T+T+CL+Y E 
Sbjct: 389 ----GRTPYASTWITMAMSYIGQNQMSKAVEMLKKAISVSRKGWKPNPITLTTCLDYLEE 444

Query: 390 ERDVKGAEEFVELLGASGLLTKEVYHWLLKIYIAANKPVSDVLDLMKADGLSADEETQKI 569
           + DV+G EE V+ L ++  LT+++YH L++ Y AA  PV+ V+D MK D ++ADEET KI
Sbjct: 445 QGDVEGIEEIVKSLKSTESLTRDIYHRLVRTYTAAGIPVTKVIDKMKMDNIAADEETHKI 504

Query: 570 LQ 575
           L+
Sbjct: 505 LE 506


>ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
           gi|449479168|ref|XP_004155524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 500

 Score =  177 bits (450), Expect = 3e-42
 Identities = 95/184 (51%), Positives = 123/184 (66%), Gaps = 1/184 (0%)
 Frame = +3

Query: 24  YGCMITSLEKLNDIEGAEKIWEEWESRGISNDFRVLNRLVSVYCTRRLFEKAEMLVQKAT 203
           Y  MITSL KL+DIEGAE+I++EWES+    DFRVLNRL+  YC + L +KAE +V +A 
Sbjct: 316 YALMITSLAKLDDIEGAERIFQEWESKCTVYDFRVLNRLLVAYCRKGLLDKAESVVNQAV 375

Query: 204 QKVAESGRSPYPSTWNILAMGYLSDKQMLKGVEMLKKALLVGRQGWKPSSVTI-TSCLEY 380
            +     R+P+ STW+ILA GY     M K VEMLKKA+LVGRQ WKP    I  +CL+Y
Sbjct: 376 VE-----RTPFRSTWSILATGYAEYGHMSKAVEMLKKAILVGRQNWKPKQGDILEACLDY 430

Query: 381 FEVERDVKGAEEFVELLGASGLLTKEVYHWLLKIYIAANKPVSDVLDLMKADGLSADEET 560
            E + D +  +E V L  +SG + KE+Y+ LL+  IA  KPV  +L+ MK DG +ADEE 
Sbjct: 431 LEKQGDAETMDEIVRLCKSSGTVMKEMYYRLLRTSIAGGKPVISILEQMKMDGFAADEEV 490

Query: 561 QKIL 572
            KIL
Sbjct: 491 DKIL 494


>ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 461

 Score =  170 bits (431), Expect = 4e-40
 Identities = 86/168 (51%), Positives = 113/168 (67%)
 Frame = +3

Query: 12  YHASYGCMITSLEKLNDIEGAEKIWEEWESRGISNDFRVLNRLVSVYCTRRLFEKAEMLV 191
           Y  +Y CMIT L KL+DIEGAEKI++EWE      DFRVLNRL+S YC R LF+KAE LV
Sbjct: 297 YPEAYSCMITCLTKLDDIEGAEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLV 356

Query: 192 QKATQKVAESGRSPYPSTWNILAMGYLSDKQMLKGVEMLKKALLVGRQGWKPSSVTITSC 371
            K  ++     R PY STWNILA GY+ DKQM K VEMLKKA+ VGR+GW+P+S+ + +C
Sbjct: 357 NKVIEE-----RMPYASTWNILAKGYVEDKQMPKAVEMLKKAISVGRKGWRPNSIILDAC 411

Query: 372 LEYFEVERDVKGAEEFVELLGASGLLTKEVYHWLLKIYIAANKPVSDV 515
           +EY E + +++  EE   L    G+   +++H LL+   A  K VS +
Sbjct: 412 IEYLEGQGNLEEIEEIARLCKNLGIPDGDIHHRLLRTSAAGEKSVSAI 459


>emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
          Length = 448

 Score =  170 bits (431), Expect = 4e-40
 Identities = 86/168 (51%), Positives = 113/168 (67%)
 Frame = +3

Query: 12  YHASYGCMITSLEKLNDIEGAEKIWEEWESRGISNDFRVLNRLVSVYCTRRLFEKAEMLV 191
           Y  +Y CMIT L KL+DIEGAEKI++EWE      DFRVLNRL+S YC R LF+KAE LV
Sbjct: 284 YPEAYSCMITCLTKLDDIEGAEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLV 343

Query: 192 QKATQKVAESGRSPYPSTWNILAMGYLSDKQMLKGVEMLKKALLVGRQGWKPSSVTITSC 371
            K  ++     R PY STWNILA GY+ DKQM K VEMLKKA+ VGR+GW+P+S+ + +C
Sbjct: 344 NKVIEE-----RMPYASTWNILAKGYVEDKQMPKAVEMLKKAISVGRKGWRPNSIILDAC 398

Query: 372 LEYFEVERDVKGAEEFVELLGASGLLTKEVYHWLLKIYIAANKPVSDV 515
           +EY E + +++  EE   L    G+   +++H LL+   A  K VS +
Sbjct: 399 IEYLEGQGNLEEIEEIARLCKNLGIPDGDIHHRLLRTSAAGEKSVSAI 446


>ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 497

 Score =  166 bits (420), Expect = 8e-39
 Identities = 84/186 (45%), Positives = 119/186 (63%)
 Frame = +3

Query: 15  HASYGCMITSLEKLNDIEGAEKIWEEWESRGISNDFRVLNRLVSVYCTRRLFEKAEMLVQ 194
           ++ Y C I++L K+ND + AEK + EWESR + +DFR++N L++ YC   L EKAE LV 
Sbjct: 311 NSMYMCRISALLKMNDTDEAEKAFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVD 370

Query: 195 KATQKVAESGRSPYPSTWNILAMGYLSDKQMLKGVEMLKKALLVGRQGWKPSSVTITSCL 374
           +A  K    GR PY +TW  LA G+  D Q+LK V++ +KAL     GW+P    +   L
Sbjct: 371 EAITK----GRMPYANTWYKLAAGFFKDGQVLKAVDLTRKALASATSGWEPDLTNVLMSL 426

Query: 375 EYFEVERDVKGAEEFVELLGASGLLTKEVYHWLLKIYIAANKPVSDVLDLMKADGLSADE 554
           ++F  +++V+ AEE   LL +   LT++VYH LLK Y+ A  PVSD+LD M  DG  AD+
Sbjct: 427 DHFMEQKNVEAAEEMASLLRSLVPLTRDVYHSLLKTYVHAGMPVSDLLDRMNEDGFEADQ 486

Query: 555 ETQKIL 572
           ET +IL
Sbjct: 487 ETDRIL 492