BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012386
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33123.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   388   e-105
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   381   e-103
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   380   e-103
ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101

>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  397 bits (1019), Expect = e-108
 Identities = 193/263 (73%), Positives = 211/263 (80%), Gaps = 4/263 (1%)
 Frame = -1

Query: 802 MSFDLHLKPACGGCGSASDLYGSNCKHLTXXXXXXXXXXXXXXXXXXXXXXXXXACGKKM 623
           MSFDL LKP+C GCGS +DLYGSNCKH+T                         +CGK M
Sbjct: 1   MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCL----------------------SCGKTM 38

Query: 622 AENRNKCYECGVPVTRLIREYNVRTTSSNDKSYFIGRFVSGLPSFSKKKNAE-KWSIQKE 446
           AEN  KCY+CG PVTRLIREYNVRT SS DK+YFIGRFV+GLP FSKKKNA+ KWS+ KE
Sbjct: 39  AENHGKCYDCGTPVTRLIREYNVRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKE 98

Query: 445 GLQGRHVTDALREKFKNKPWLLEDEAGQFHYHGHLEGAQSASYYLLVMQGKEFVAIPAGS 266
           GLQGR V+DALREK+KNKPWLLEDE GQ+ YHG LEG+QSA+YYLL+MQGKEFVAIPAGS
Sbjct: 99  GLQGRQVSDALREKYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGS 158

Query: 265 WYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGETEKFDDKEAG- 89
           WYNFNKVAQYKQLTLEEAEEKMKNRR+TADGY+RWMMKAANNGPAAFGE EK DDKE G 
Sbjct: 159 WYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGG 218

Query: 88  --GGGRGNKKATADNDEGNASDK 26
             GGGRG KK T D +EGN SDK
Sbjct: 219 AAGGGRGRKKQTGDEEEGNVSDK 241


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score =  388 bits (996), Expect = e-105
 Identities = 188/257 (73%), Positives = 206/257 (80%), Gaps = 4/257 (1%)
 Frame = -1

Query: 784 LKPACGGCGSASDLYGSNCKHLTXXXXXXXXXXXXXXXXXXXXXXXXXACGKKMAENRNK 605
           LKP+C GCGS +DLYGSNCKH+T                         +CGK MAEN  K
Sbjct: 2   LKPSCSGCGSTTDLYGSNCKHMTLCL----------------------SCGKTMAENHGK 39

Query: 604 CYECGVPVTRLIREYNVRTTSSNDKSYFIGRFVSGLPSFSKKKNAE-KWSIQKEGLQGRH 428
           CY+CG PVTRLIREYNVRT SS DK+YFIGRFV+GLP FSKKKNA+ KWS+ KEGLQGR 
Sbjct: 40  CYDCGTPVTRLIREYNVRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQ 99

Query: 427 VTDALREKFKNKPWLLEDEAGQFHYHGHLEGAQSASYYLLVMQGKEFVAIPAGSWYNFNK 248
           V+DALREK+KNKPWLLEDE GQ+ YHG LEG+QSA+YYLL+MQGKEFVAIPAGSWYNFNK
Sbjct: 100 VSDALREKYKNKPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNK 159

Query: 247 VAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGETEKFDDKEAG---GGGR 77
           VAQYKQLTLEEAEEKMKNRR+TADGY+RWMMKAANNGPAAFGE EK DDKE G   GGGR
Sbjct: 160 VAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGR 219

Query: 76  GNKKATADNDEGNASDK 26
           G KK T D +EGN SDK
Sbjct: 220 GRKKQTGDEEEGNVSDK 236


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Cucumis sativus]
          Length = 538

 Score =  381 bits (979), Expect = e-103
 Identities = 184/262 (70%), Positives = 210/262 (80%), Gaps = 2/262 (0%)
 Frame = -1

Query: 802 MSFDLHLKPACGGCGSASDLYGSNCKHLTXXXXXXXXXXXXXXXXXXXXXXXXXACGKKM 623
           MSFDL LK +C GCGS ++LYGSNCKH+T                          CGK M
Sbjct: 1   MSFDLLLKQSCSGCGSTTELYGSNCKHMTLCL----------------------TCGKTM 38

Query: 622 AENRNKCYECGVPVTRLIREYNVRTTSSNDKSYFIGRFVSGLPSFSKKKNAE-KWSIQKE 446
           AEN+ KCY+CG  VTRLIREYNVR ++SNDK+YFIGRF+SGLP+FSKK+NAE KWS+ KE
Sbjct: 39  AENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRFMSGLPNFSKKRNAENKWSLYKE 98

Query: 445 GLQGRHVTDALREKFKNKPWLLEDEAGQFHYHGHLEGAQSASYYLLVMQGKEFVAIPAGS 266
           GLQGR ++DALREK+KN+PWLLEDE GQF + GHLEG+QSA+YYLLV+QGKEF AIPAGS
Sbjct: 99  GLQGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGS 158

Query: 265 WYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGETEKFDDKE-AG 89
           WYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYERWMMKAA+NGPAAFGE EKFDDKE  G
Sbjct: 159 WYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVEKFDDKETVG 218

Query: 88  GGGRGNKKATADNDEGNASDKG 23
             GRG +K T D +EGN SD+G
Sbjct: 219 TSGRGRRKTTGDENEGNVSDRG 240


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
           gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 533

 Score =  380 bits (976), Expect = e-103
 Identities = 184/261 (70%), Positives = 210/261 (80%), Gaps = 2/261 (0%)
 Frame = -1

Query: 799 SFDLHLKPACGGCGSASDLYGSNCKHLTXXXXXXXXXXXXXXXXXXXXXXXXXACGKKMA 620
           + DL LK +C GCGS +DLYGSNCKH+T                         +CGK MA
Sbjct: 3   TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCL----------------------SCGKTMA 40

Query: 619 ENRNKCYECGVPVTRLIREYNVRTTSSNDKSYFIGRFVSGLPSFSKKKNAE-KWSIQKEG 443
           EN  KC++CG  V+RLIREYNVR +SS+DK+YFIGRFV+GLPSFSKKKNAE KWS+QKEG
Sbjct: 41  ENHAKCFDCGATVSRLIREYNVRASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEG 100

Query: 442 LQGRHVTDALREKFKNKPWLLEDEAGQFHYHGHLEGAQSASYYLLVMQGKEFVAIPAGSW 263
           LQGR +TDALREK+KN+PWLLEDE GQF Y GHLEG+QSA+YYLL++QGKEFVAIPA SW
Sbjct: 101 LQGRQLTDALREKYKNRPWLLEDETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSW 160

Query: 262 YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGETEKFDDKEAG-G 86
           YNFNKVAQYKQLTLEEAEEKM+NRRKTADGYERWMMKAANNGPAAFGE EK DDK++G  
Sbjct: 161 YNFNKVAQYKQLTLEEAEEKMRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAA 220

Query: 85  GGRGNKKATADNDEGNASDKG 23
            GRG KKA  D++EGN SD+G
Sbjct: 221 SGRGRKKAAGDDEEGNVSDRG 241


>ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|222867168|gb|EEF04299.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  373 bits (958), Expect = e-101
 Identities = 186/265 (70%), Positives = 208/265 (78%), Gaps = 5/265 (1%)
 Frame = -1

Query: 802 MSFDLHLKPACGGCGSASDLYGSNCKHLTXXXXXXXXXXXXXXXXXXXXXXXXXACGKKM 623
           MSFDL LKP+C GCGS +DLYGSNCKH+T                          CGK M
Sbjct: 1   MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLN----------------------CGKTM 38

Query: 622 AENRNKCYECGVPVTRLIREYNVRTTSSNDKSYFIGRFVSGLPSFSKKKNAE-KWSIQKE 446
           AENR KC++CG  V+RLIREYNVR ++S+DK+YFIGRFV+GLPSFSKKKNAE KWS+ KE
Sbjct: 39  AENRGKCFDCGTTVSRLIREYNVRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKE 98

Query: 445 GLQGRHVTDALREKFKNKPWLLEDEAGQFHYHGHLEGAQSASYYLLVMQGKEFVAIPAGS 266
           G+ GR +TDALREKFKNKPWLLEDE GQ  Y GHLEG+QSA+YYLL+M GKEFVAIPAGS
Sbjct: 99  GILGRQITDALREKFKNKPWLLEDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGS 158

Query: 265 W--YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGETEKFDDKE- 95
           W  YNFNKVA YKQLTLEEAEEKMKNRRKTADGYERWMMKAANNG AAFGE EK DDKE 
Sbjct: 159 WYVYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEG 218

Query: 94  -AGGGGRGNKKATADNDEGNASDKG 23
            + GG  G +KA+ D+DEGN SD+G
Sbjct: 219 VSAGGRGGRRKASGDDDEGNVSDRG 243