BLASTX nr result

ID: Cimicifuga21_contig00012384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012384
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65811.1| hypothetical protein VITISV_031711 [Vitis vinifera]   134   1e-29
ref|XP_002315875.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002284639.1| PREDICTED: uncharacterized protein LOC100247...   133   2e-29
ref|XP_002527797.1| conserved hypothetical protein [Ricinus comm...   132   6e-29
gb|ABK96329.1| unknown [Populus trichocarpa x Populus deltoides]      131   7e-29

>emb|CAN65811.1| hypothetical protein VITISV_031711 [Vitis vinifera]
          Length = 137

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = -2

Query: 254 NSHQSKGNRLLISINVLGSAGPLRFVVNEEELVVAVIETALRNYAREGRLPILGSDLNDF 75
           N    K NRLLISINVLGSAGP+RFVV+E+ELV AVI+TAL++YAREGRLPILGSDLN+F
Sbjct: 9   NQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPILGSDLNNF 68

Query: 74  LLYSANAGTDALTPWETIGSRGGR 3
           LLY +NAG+DAL+PWETIGS G R
Sbjct: 69  LLYCSNAGSDALSPWETIGSNGXR 92


>ref|XP_002315875.1| predicted protein [Populus trichocarpa] gi|222864915|gb|EEF02046.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  133 bits (335), Expect = 2e-29
 Identities = 64/80 (80%), Positives = 73/80 (91%)
 Frame = -2

Query: 242 SKGNRLLISINVLGSAGPLRFVVNEEELVVAVIETALRNYAREGRLPILGSDLNDFLLYS 63
           +KGNR LIS+ VLGSAGP+RFVVNEE+LVVAVI TAL++YAREGRLPILGSDLNDFLLY 
Sbjct: 12  AKGNRFLISVTVLGSAGPIRFVVNEEDLVVAVINTALKSYAREGRLPILGSDLNDFLLYC 71

Query: 62  ANAGTDALTPWETIGSRGGR 3
            NAG+DA++PWETIGS G R
Sbjct: 72  PNAGSDAISPWETIGSLGAR 91


>ref|XP_002284639.1| PREDICTED: uncharacterized protein LOC100247453 [Vitis vinifera]
           gi|297737674|emb|CBI26875.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  133 bits (335), Expect = 2e-29
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = -2

Query: 254 NSHQSKGNRLLISINVLGSAGPLRFVVNEEELVVAVIETALRNYAREGRLPILGSDLNDF 75
           N    K NRLLISINVLGSAGP+RFVV+E+ELV AVI+TAL++YAREGRLPILGSDLN+F
Sbjct: 9   NQSAGKANRLLISINVLGSAGPIRFVVSEDELVAAVIDTALKSYAREGRLPILGSDLNNF 68

Query: 74  LLYSANAGTDALTPWETIGSRGGR 3
           LLY +NAG+DAL+PWETIGS G R
Sbjct: 69  LLYCSNAGSDALSPWETIGSNGTR 92


>ref|XP_002527797.1| conserved hypothetical protein [Ricinus communis]
           gi|223532832|gb|EEF34607.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score =  132 bits (331), Expect = 6e-29
 Identities = 64/84 (76%), Positives = 74/84 (88%)
 Frame = -2

Query: 254 NSHQSKGNRLLISINVLGSAGPLRFVVNEEELVVAVIETALRNYAREGRLPILGSDLNDF 75
           N   +KGNR LIS+ VLGSAGP+RFVVNEEELV +VI+TAL++YAREGRLPILGSDLNDF
Sbjct: 9   NQAAAKGNRFLISVTVLGSAGPIRFVVNEEELVASVIDTALKSYAREGRLPILGSDLNDF 68

Query: 74  LLYSANAGTDALTPWETIGSRGGR 3
            LY ANAG++AL+PWETIGS G R
Sbjct: 69  FLYCANAGSEALSPWETIGSFGFR 92


>gb|ABK96329.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 133

 Score =  131 bits (330), Expect = 7e-29
 Identities = 63/80 (78%), Positives = 73/80 (91%)
 Frame = -2

Query: 242 SKGNRLLISINVLGSAGPLRFVVNEEELVVAVIETALRNYAREGRLPILGSDLNDFLLYS 63
           +KGNR LIS+ VLGSAGP+RFVVNEE+LVVAVI TAL++YAREGRLPILGSDLNDFLLY 
Sbjct: 12  AKGNRFLISVTVLGSAGPIRFVVNEEDLVVAVINTALKSYAREGRLPILGSDLNDFLLYC 71

Query: 62  ANAGTDALTPWETIGSRGGR 3
            +AG+DA++PWETIGS G R
Sbjct: 72  PDAGSDAISPWETIGSLGAR 91


Top